Male CNS – Cell Type Explorer

LHAV3i1(R)

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
1,841
Total Synapses
Post: 1,298 | Pre: 543
log ratio : -1.26
1,841
Mean Synapses
Post: 1,298 | Pre: 543
log ratio : -1.26
ACh(93.5% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (7 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
LH(R)1,13087.1%-2.1126148.1%
SLP(R)1017.8%0.9219135.2%
SMP(R)372.9%0.41499.0%
SIP(R)80.6%1.86295.3%
CentralBrain-unspecified151.2%-0.45112.0%
SCL(R)60.5%-1.5820.4%
AVLP(R)10.1%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
LHAV3i1
%
In
CV
VA1d_adPN (R)3ACh867.0%0.4
LHAV4a1_b (R)4GABA756.1%0.5
VC1_lPN (R)1ACh645.2%0.0
VA7m_lPN (R)3ACh574.6%0.1
DM4_adPN (R)1ACh483.9%0.0
LHCENT8 (R)2GABA443.6%0.1
LHPV4j4 (R)1Glu393.2%0.0
VL2a_adPN (R)1ACh352.9%0.0
LHCENT2 (R)1GABA322.6%0.0
M_vPNml86 (R)2GABA272.2%0.1
VM1_lPN (R)1ACh211.7%0.0
DM2_lPN (R)2ACh211.7%0.3
DM3_adPN (R)1ACh191.5%0.0
MBON07 (R)2Glu191.5%0.4
CB3729 (R)2unc161.3%0.1
SLP057 (R)1GABA151.2%0.0
LHCENT6 (R)1GABA151.2%0.0
CB4132 (R)2ACh151.2%0.5
SMP049 (R)1GABA141.1%0.0
DA1_lPN (R)3ACh141.1%0.8
LHCENT5 (R)1GABA131.1%0.0
DC2_adPN (R)2ACh121.0%0.7
DL5_adPN (R)1ACh110.9%0.0
M_vPNml69 (R)2GABA110.9%0.6
CB3288 (R)2Glu110.9%0.1
DL1_adPN (R)2ACh100.8%0.4
CB1296_a (R)2GABA100.8%0.2
CSD (L)15-HT90.7%0.0
VM7d_adPN (R)3ACh90.7%0.5
LHAV4e2_b1 (R)2GABA90.7%0.1
LHPV6h2 (R)4ACh90.7%0.2
LHPV4j3 (R)1Glu80.7%0.0
VL2p_adPN (R)1ACh80.7%0.0
DL3_lPN (R)2ACh80.7%0.5
SMP076 (R)1GABA70.6%0.0
LHAV4j1 (R)1GABA70.6%0.0
DM1_lPN (R)1ACh70.6%0.0
LHAV4g13 (R)2GABA70.6%0.1
DM3_vPN (R)1GABA60.5%0.0
LHPV6g1 (R)1Glu60.5%0.0
LHAV3k1 (R)1ACh60.5%0.0
VA3_adPN (R)2ACh60.5%0.7
LHPD3a2_b (R)2Glu60.5%0.7
CB1160 (R)2Glu60.5%0.3
CB2045 (R)2ACh60.5%0.0
DM6_adPN (R)3ACh60.5%0.4
LHPV4j2 (R)1Glu50.4%0.0
LHAV3k5 (R)1Glu50.4%0.0
LHCENT1 (R)1GABA50.4%0.0
DP1m_adPN (R)1ACh50.4%0.0
LHAV4e7_b (R)2Glu50.4%0.6
LHAV2k12_a (R)2ACh50.4%0.6
CB2004 (R)2GABA50.4%0.6
D_adPN (R)3ACh50.4%0.3
CB2172 (R)1ACh40.3%0.0
CB1735 (R)1Glu40.3%0.0
LHAV4g14 (R)1GABA40.3%0.0
LH005m (R)1GABA40.3%0.0
LHAV2n1 (R)1GABA40.3%0.0
VM2_adPN (R)1ACh40.3%0.0
LHAD1f2 (R)1Glu40.3%0.0
LHCENT10 (R)1GABA40.3%0.0
LHPV12a1 (R)1GABA40.3%0.0
LHAV4b2 (R)2GABA40.3%0.5
LHPV5a2 (R)2ACh40.3%0.5
CB3023 (R)2ACh40.3%0.5
LHAV2m1 (R)2GABA40.3%0.5
CB2678 (R)3GABA40.3%0.4
VA1v_adPN (R)3ACh40.3%0.4
CB2711 (R)1GABA30.2%0.0
M_vPNml77 (R)1GABA30.2%0.0
DM4_vPN (R)1GABA30.2%0.0
CB2904 (R)1Glu30.2%0.0
CB2861 (R)1unc30.2%0.0
LHAV3e3_b (R)1ACh30.2%0.0
VM4_adPN (R)1ACh30.2%0.0
PPL201 (R)1DA30.2%0.0
VC2_lPN (R)1ACh30.2%0.0
DC1_adPN (R)1ACh30.2%0.0
LHPV12a1 (L)1GABA30.2%0.0
DM5_lPN (R)2ACh30.2%0.3
LHPV5c1 (R)2ACh30.2%0.3
LHPV5a1 (R)2ACh30.2%0.3
LHPV5c1_a (R)2ACh30.2%0.3
LHAV2c1 (R)2ACh30.2%0.3
LHPV6a1 (R)2ACh30.2%0.3
CB2786 (R)2Glu30.2%0.3
LHAV2h1 (R)2ACh30.2%0.3
CB1687 (R)2Glu30.2%0.3
MBON02 (R)1Glu20.2%0.0
LHPV1c1 (R)1ACh20.2%0.0
LHAV7a1_a (R)1Glu20.2%0.0
M_vPNml57 (R)1GABA20.2%0.0
LHPV4a7 (R)1Glu20.2%0.0
VL2p_vPN (R)1GABA20.2%0.0
CB2064 (R)1Glu20.2%0.0
CB2111 (R)1Glu20.2%0.0
LHAV6a3 (R)1ACh20.2%0.0
CB2851 (R)1GABA20.2%0.0
M_vPNml68 (R)1GABA20.2%0.0
CB2906 (R)1GABA20.2%0.0
CB2224 (R)1ACh20.2%0.0
CB1432 (R)1GABA20.2%0.0
LHAD1b3 (R)1ACh20.2%0.0
LHAV2k1 (R)1ACh20.2%0.0
LHPV4a9 (R)1Glu20.2%0.0
VC4_adPN (R)1ACh20.2%0.0
SMP170 (R)1Glu20.2%0.0
LHPV2h1 (R)1ACh20.2%0.0
SMP495_a (R)1Glu20.2%0.0
PPL203 (R)1unc20.2%0.0
MBON18 (R)1ACh20.2%0.0
AVLP030 (R)1GABA20.2%0.0
mALB3 (L)1GABA20.2%0.0
PRW072 (R)1ACh20.2%0.0
LHCENT9 (R)1GABA20.2%0.0
CSD (R)15-HT20.2%0.0
MBON20 (R)1GABA20.2%0.0
AVLP597 (R)1GABA20.2%0.0
LHPD3a5 (R)2Glu20.2%0.0
LHAD1b5 (R)2ACh20.2%0.0
LHAD3f1_a (R)2ACh20.2%0.0
CB3733 (R)2GABA20.2%0.0
CB4084 (R)2ACh20.2%0.0
LHPV4a8 (R)2Glu20.2%0.0
LHPV4d10 (R)2Glu20.2%0.0
CB2448 (R)2GABA20.2%0.0
CB3762 (R)2unc20.2%0.0
LHAV4b4 (R)2GABA20.2%0.0
CB2831 (R)2GABA20.2%0.0
DL2d_adPN (R)2ACh20.2%0.0
SLP457 (R)2unc20.2%0.0
M_vPNml88 (R)1GABA10.1%0.0
LHAV3g2 (R)1ACh10.1%0.0
SMP503 (R)1unc10.1%0.0
LHAV7a3 (R)1Glu10.1%0.0
LHCENT3 (R)1GABA10.1%0.0
SMP082 (R)1Glu10.1%0.0
SLP327 (R)1ACh10.1%0.0
SMP347 (R)1ACh10.1%0.0
LHPV5b2 (R)1ACh10.1%0.0
LHPV4i3 (R)1Glu10.1%0.0
CB1359 (R)1Glu10.1%0.0
M_vPNml80 (R)1GABA10.1%0.0
CB1924 (R)1ACh10.1%0.0
CB4151 (R)1Glu10.1%0.0
LHAV4g1 (R)1GABA10.1%0.0
CB1033 (R)1ACh10.1%0.0
CB3608 (R)1ACh10.1%0.0
M_vPNml83 (R)1GABA10.1%0.0
LHAV5a2_a3 (R)1ACh10.1%0.0
SMP362 (R)1ACh10.1%0.0
CB3340 (R)1ACh10.1%0.0
M_vPNml53 (R)1GABA10.1%0.0
CB4115 (R)1Glu10.1%0.0
CB1073 (R)1ACh10.1%0.0
LHPV4k1 (R)1Glu10.1%0.0
LHPV4a5 (R)1Glu10.1%0.0
CB2589 (R)1GABA10.1%0.0
LHPD3a2_c (R)1Glu10.1%0.0
LHPV5h2_b (R)1ACh10.1%0.0
LHPV4a3 (R)1Glu10.1%0.0
LHAV7a7 (R)1Glu10.1%0.0
CB1909 (R)1ACh10.1%0.0
CB2530 (R)1Glu10.1%0.0
CB2693 (R)1ACh10.1%0.0
LHAV6a5 (R)1ACh10.1%0.0
LHAV5a2_a2 (R)1ACh10.1%0.0
LHPV4b2 (R)1Glu10.1%0.0
LHPV4a10 (R)1Glu10.1%0.0
LHAV6a1 (R)1ACh10.1%0.0
LHAV4a5 (R)1GABA10.1%0.0
CB1246 (R)1GABA10.1%0.0
CB2038 (R)1GABA10.1%0.0
M_vPNml76 (R)1GABA10.1%0.0
CB1500 (R)1ACh10.1%0.0
CB1811 (R)1ACh10.1%0.0
CB2764 (R)1GABA10.1%0.0
LHAV3b1 (R)1ACh10.1%0.0
CB2889 (R)1unc10.1%0.0
LHPV4b4 (R)1Glu10.1%0.0
LHAV4a1_a (R)1GABA10.1%0.0
CB3051 (R)1GABA10.1%0.0
CB3012 (R)1Glu10.1%0.0
LHAV3e6 (R)1ACh10.1%0.0
CB3374 (R)1ACh10.1%0.0
CB3732 (R)1GABA10.1%0.0
LHAD1a1 (R)1ACh10.1%0.0
CB4220 (R)1ACh10.1%0.0
LHAV4e1_a (R)1unc10.1%0.0
LHAD1a4_a (R)1ACh10.1%0.0
CB1276 (R)1ACh10.1%0.0
LHPV4b1 (R)1Glu10.1%0.0
LHAV2f2_b (R)1GABA10.1%0.0
LHAV1d2 (R)1ACh10.1%0.0
CB2687 (R)1ACh10.1%0.0
LHAV4g12 (R)1GABA10.1%0.0
LHAV3e5 (R)1ACh10.1%0.0
LHAV5a8 (R)1ACh10.1%0.0
LHAV2k12_b (R)1ACh10.1%0.0
CB1308 (R)1ACh10.1%0.0
LHPV6c2 (R)1ACh10.1%0.0
LHPV4i4 (R)1Glu10.1%0.0
LHPV4a11 (R)1Glu10.1%0.0
M_lvPNm39 (R)1ACh10.1%0.0
CB2592 (R)1ACh10.1%0.0
LHAV2b2_c (R)1ACh10.1%0.0
CB1405 (R)1Glu10.1%0.0
LHAV6b1 (R)1ACh10.1%0.0
LHAV3e4_b (R)1ACh10.1%0.0
LHPD4d1 (R)1Glu10.1%0.0
SLP237 (R)1ACh10.1%0.0
5-HTPMPD01 (R)15-HT10.1%0.0
LHAV1e1 (R)1GABA10.1%0.0
DN1pB (R)1Glu10.1%0.0
M_lvPNm24 (R)1ACh10.1%0.0
SMP503 (L)1unc10.1%0.0
PRW003 (R)1Glu10.1%0.0
VM7v_adPN (R)1ACh10.1%0.0
5-HTPMPD01 (L)15-HT10.1%0.0
OA-VUMa2 (M)1OA10.1%0.0
SLP438 (R)1unc10.1%0.0
OA-VUMa6 (M)1OA10.1%0.0

Outputs

downstream
partner
#NTconns
LHAV3i1
%
Out
CV
LHPV12a1 (R)1GABA12012.0%0.0
LHAD1f2 (R)1Glu969.6%0.0
LHAV4g1 (R)3GABA767.6%0.3
LHCENT2 (R)1GABA646.4%0.0
LHAV3h1 (R)1ACh292.9%0.0
LHAV4b4 (R)3GABA282.8%0.6
CB2592 (R)3ACh232.3%0.7
CB1073 (R)3ACh232.3%0.4
CB4209 (R)4ACh222.2%0.5
CB2507 (R)3Glu181.8%0.5
LHPV5e1 (R)1ACh171.7%0.0
LHAV4e4 (R)2unc141.4%0.9
CB1275 (R)1unc131.3%0.0
SLP400 (R)2ACh131.3%0.5
LHAV6b3 (R)4ACh131.3%0.5
CB3729 (R)2unc111.1%0.6
SLP327 (R)2ACh111.1%0.5
CB4132 (R)2ACh111.1%0.3
SLP281 (R)1Glu101.0%0.0
LHPV12a1 (L)1GABA101.0%0.0
LHAV4g12 (R)2GABA101.0%0.4
CB1590 (R)3Glu101.0%0.5
CB2105 (R)1ACh90.9%0.0
SLP265 (R)1Glu90.9%0.0
CB1359 (R)2Glu90.9%0.8
LHAV4e1_b (R)2unc90.9%0.8
LHPD3a2_a (R)2Glu90.9%0.6
CL080 (R)1ACh80.8%0.0
CB1821 (R)1GABA70.7%0.0
LHAV4a1_b (R)2GABA70.7%0.7
CB1241 (R)2ACh70.7%0.1
LHAD1b5 (R)5ACh70.7%0.6
SMP086 (R)1Glu60.6%0.0
LHAV4l1 (R)1GABA60.6%0.0
SLP470 (R)1ACh60.6%0.0
CB3768 (R)2ACh60.6%0.3
SMP353 (R)1ACh50.5%0.0
CB4208 (R)1ACh50.5%0.0
CB2038 (R)1GABA50.5%0.0
SLP099 (R)1Glu50.5%0.0
SLP405_c (R)2ACh50.5%0.6
LHAV2h1 (R)2ACh50.5%0.6
LHAV4g4_b (R)2unc50.5%0.2
SIP003_b (R)1ACh40.4%0.0
LHPV5h4 (R)1ACh40.4%0.0
CB3697 (R)1ACh40.4%0.0
AVLP015 (R)1Glu40.4%0.0
PRW072 (L)1ACh40.4%0.0
LHCENT6 (R)1GABA40.4%0.0
VA1d_adPN (R)1ACh40.4%0.0
FB8F_a (R)2Glu40.4%0.5
CB2479 (R)2ACh40.4%0.0
PPL106 (R)1DA30.3%0.0
DL5_adPN (R)1ACh30.3%0.0
SLP405_a (R)1ACh30.3%0.0
SMP125 (L)1Glu30.3%0.0
SLP406 (R)1ACh30.3%0.0
LHPV5e2 (R)1ACh30.3%0.0
SMP087 (R)1Glu30.3%0.0
CB3261 (R)1ACh30.3%0.0
LHCENT13_b (R)1GABA30.3%0.0
LHAV5b2 (R)1ACh30.3%0.0
LHAV4g14 (R)1GABA30.3%0.0
CL077 (R)1ACh30.3%0.0
FB6G (R)1Glu30.3%0.0
PRW072 (R)1ACh30.3%0.0
CB1811 (R)2ACh30.3%0.3
LHPV4i3 (R)1Glu20.2%0.0
SMP355 (R)1ACh20.2%0.0
CB2040 (R)1ACh20.2%0.0
CB2315 (R)1Glu20.2%0.0
CB1628 (R)1ACh20.2%0.0
SMP443 (R)1Glu20.2%0.0
LHPV4b4 (R)1Glu20.2%0.0
LHAV4a4 (R)1GABA20.2%0.0
LHAV3a1_b (R)1ACh20.2%0.0
CB1626 (R)1unc20.2%0.0
CB2092 (R)1ACh20.2%0.0
CB1432 (R)1GABA20.2%0.0
CB1981 (R)1Glu20.2%0.0
CB1771 (R)1ACh20.2%0.0
LHAV1d1 (R)1ACh20.2%0.0
LH002m (R)1ACh20.2%0.0
CB2522 (R)1ACh20.2%0.0
CB3023 (R)1ACh20.2%0.0
SLP113 (R)1ACh20.2%0.0
LHAD2c3 (R)1ACh20.2%0.0
LHAD1b2_d (R)1ACh20.2%0.0
CB1300 (R)1ACh20.2%0.0
CB1655 (R)1ACh20.2%0.0
LHAV3e3_a (R)1ACh20.2%0.0
LHAV3m1 (R)1GABA20.2%0.0
LHCENT1 (R)1GABA20.2%0.0
LHPV5c1_a (R)2ACh20.2%0.0
LHAV5c1 (R)2ACh20.2%0.0
SLP008 (R)1Glu10.1%0.0
SMP170 (R)1Glu10.1%0.0
LHPD4c1 (R)1ACh10.1%0.0
CB2754 (R)1ACh10.1%0.0
OA-VPM3 (L)1OA10.1%0.0
PAM11 (R)1DA10.1%0.0
LHPV5b2 (R)1ACh10.1%0.0
CB4134 (R)1Glu10.1%0.0
CB4131 (R)1Glu10.1%0.0
SMP426 (R)1Glu10.1%0.0
CB2934 (R)1ACh10.1%0.0
SIP015 (R)1Glu10.1%0.0
CB1089 (R)1ACh10.1%0.0
CB2174 (R)1ACh10.1%0.0
CB2720 (R)1ACh10.1%0.0
CB2467 (R)1ACh10.1%0.0
SMP126 (L)1Glu10.1%0.0
CB1060 (R)1ACh10.1%0.0
CB2292 (R)1unc10.1%0.0
LHAV6a7 (R)1ACh10.1%0.0
LHPD4a1 (R)1Glu10.1%0.0
CB4087 (R)1ACh10.1%0.0
LHAV6a5 (R)1ACh10.1%0.0
CB2958 (R)1unc10.1%0.0
CB3318 (R)1ACh10.1%0.0
LHPV4a5 (R)1Glu10.1%0.0
LHPD3a2_c (R)1Glu10.1%0.0
CB1850 (R)1Glu10.1%0.0
CB2480 (R)1GABA10.1%0.0
LHAV6a4 (R)1ACh10.1%0.0
SIP005 (R)1Glu10.1%0.0
LHAV3b2_b (R)1ACh10.1%0.0
CB1619 (R)1GABA10.1%0.0
LHPV5c1 (R)1ACh10.1%0.0
CB2851 (R)1GABA10.1%0.0
LHPD4a2 (R)1Glu10.1%0.0
CB4100 (R)1ACh10.1%0.0
LHAD1a3 (R)1ACh10.1%0.0
LHAD1f1 (R)1Glu10.1%0.0
LHPD2a2 (R)1ACh10.1%0.0
SMP201 (R)1Glu10.1%0.0
CB2448 (R)1GABA10.1%0.0
LHPV2a3 (R)1GABA10.1%0.0
CB4220 (R)1ACh10.1%0.0
LHPV4b1 (R)1Glu10.1%0.0
LHAV2e4_b (R)1ACh10.1%0.0
LHAD1a2 (R)1ACh10.1%0.0
CB2831 (R)1GABA10.1%0.0
CB4141 (R)1ACh10.1%0.0
SMP307 (R)1unc10.1%0.0
CB2045 (R)1ACh10.1%0.0
CB2805 (R)1ACh10.1%0.0
CB2048 (R)1ACh10.1%0.0
SMP399_a (R)1ACh10.1%0.0
CB4125 (R)1unc10.1%0.0
SMP335 (R)1Glu10.1%0.0
LHAV4j1 (R)1GABA10.1%0.0
CB1405 (R)1Glu10.1%0.0
LHAV6b1 (R)1ACh10.1%0.0
CB2691 (R)1GABA10.1%0.0
SLP376 (R)1Glu10.1%0.0
CB1365 (R)1Glu10.1%0.0
LHAV2m1 (R)1GABA10.1%0.0
LHAV3b12 (R)1ACh10.1%0.0
LHAV3a1_c (R)1ACh10.1%0.0
SLP237 (R)1ACh10.1%0.0
LHAD1h1 (R)1GABA10.1%0.0
LHPV4j4 (R)1Glu10.1%0.0
MBON24 (R)1ACh10.1%0.0
CL021 (R)1ACh10.1%0.0
LHPD5d1 (R)1ACh10.1%0.0
PLP130 (R)1ACh10.1%0.0
LHAV3k1 (R)1ACh10.1%0.0
SLP441 (R)1ACh10.1%0.0
LHCENT9 (R)1GABA10.1%0.0
LHCENT8 (R)1GABA10.1%0.0
DM3_adPN (R)1ACh10.1%0.0
SMP177 (R)1ACh10.1%0.0