Male CNS – Cell Type Explorer

LCNOp(R)[PC]{02A_put2}

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
3,597
Total Synapses
Post: 2,992 | Pre: 605
log ratio : -2.31
3,597
Mean Synapses
Post: 2,992 | Pre: 605
log ratio : -2.31
Glu(81.3% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (10 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
NO1,01033.8%-0.8157595.0%
LAL(R)1,46849.1%-6.71142.3%
CRE(R)32510.9%-4.88111.8%
CentralBrain-unspecified1555.2%-4.9550.8%
bL(R)120.4%-inf00.0%
BU(R)70.2%-inf00.0%
VES(R)70.2%-inf00.0%
gL(R)40.1%-inf00.0%
AB(R)30.1%-inf00.0%
b'L(R)10.0%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
LCNOp
%
In
CV
PFNp_a (R)34ACh69423.7%0.4
PFL3 (L)12ACh2297.8%0.3
PFNp_b (R)48ACh1725.9%1.1
PVLP114 (R)1ACh1595.4%0.0
LAL152 (L)1ACh1354.6%0.0
LAL043_a (R)2unc1344.6%0.1
LAL153 (L)1ACh1153.9%0.0
LAL043_d (R)1GABA832.8%0.0
LAL043_c (R)1GABA792.7%0.0
DNpe027 (R)1ACh682.3%0.0
CRE041 (R)1GABA632.2%0.0
PFNp_e (R)10ACh561.9%0.9
PLP161 (R)2ACh521.8%0.0
LAL043_b (R)1unc451.5%0.0
PLP162 (R)2ACh451.5%0.3
CRE200m (L)4Glu411.4%0.6
SMP192 (R)1ACh361.2%0.0
LAL175 (R)2ACh331.1%0.2
SMP192 (L)1ACh321.1%0.0
WED010 (R)3ACh311.1%0.6
VES010 (R)1GABA291.0%0.0
LAL109 (R)2GABA260.9%0.3
OA-VPM3 (L)1OA240.8%0.0
LAL303m (R)2ACh230.8%0.0
OA-VUMa1 (M)2OA220.8%0.0
PS206 (L)1ACh160.5%0.0
PVLP138 (L)1ACh140.5%0.0
CRE041 (L)1GABA130.4%0.0
OA-VPM3 (R)1OA130.4%0.0
CRE086 (R)3ACh130.4%0.3
PFNp_d (R)7ACh130.4%0.4
CRE005 (L)2ACh100.3%0.2
LAL043_e (R)1GABA90.3%0.0
LAL163 (L)1ACh90.3%0.0
AOTU026 (R)1ACh90.3%0.0
LAL160 (R)1ACh90.3%0.0
CB1213 (R)2ACh90.3%0.3
ExR6 (R)1Glu80.3%0.0
FB4F_a (R)2Glu80.3%0.8
CRE005 (R)2ACh80.3%0.0
FB1H (R)1DA70.2%0.0
LAL040 (L)1GABA70.2%0.0
MBON30 (R)1Glu70.2%0.0
FB4H (R)1Glu70.2%0.0
FB1C (L)2DA70.2%0.1
PFNp_c (R)6ACh70.2%0.3
LAL123 (L)1unc60.2%0.0
MBON27 (R)1ACh60.2%0.0
SMP184 (L)1ACh60.2%0.0
LAL054 (R)1Glu60.2%0.0
PPM1205 (R)1DA60.2%0.0
LAL009 (R)1ACh60.2%0.0
ExR1 (R)2ACh60.2%0.3
CRE011 (R)1ACh50.2%0.0
LAL175 (L)1ACh50.2%0.0
LAL163 (R)1ACh50.2%0.0
LAL052 (R)1Glu50.2%0.0
CRE013 (R)1GABA50.2%0.0
CRE013 (L)1GABA40.1%0.0
LAL040 (R)1GABA40.1%0.0
LAL060_b (R)1GABA40.1%0.0
CB2713 (R)1ACh40.1%0.0
CRE106 (R)1ACh40.1%0.0
AOTU006 (R)1ACh40.1%0.0
LAL119 (R)1ACh40.1%0.0
LAL159 (R)1ACh40.1%0.0
AOTU027 (R)1ACh40.1%0.0
DNa11 (R)1ACh40.1%0.0
LAL157 (L)1ACh40.1%0.0
LPT31 (R)2ACh40.1%0.0
SMP544 (R)1GABA30.1%0.0
FB1C (R)1DA30.1%0.0
ATL037 (R)1ACh30.1%0.0
CRE085 (L)1ACh30.1%0.0
IB069 (L)1ACh30.1%0.0
WEDPN18 (R)1ACh30.1%0.0
SMP147 (L)1GABA30.1%0.0
FB1B (L)1Glu30.1%0.0
AVLP093 (R)1GABA30.1%0.0
LAL300m (R)1ACh30.1%0.0
LAL176 (R)1ACh30.1%0.0
LAL164 (L)1ACh30.1%0.0
AOTU028 (R)1ACh30.1%0.0
LAL152 (R)1ACh30.1%0.0
LAL161 (R)1ACh30.1%0.0
LAL127 (R)2GABA30.1%0.3
LAL022 (R)1ACh20.1%0.0
CRE043_a1 (R)1GABA20.1%0.0
CRE022 (L)1Glu20.1%0.0
LAL156_a (R)1ACh20.1%0.0
FB1H (L)1DA20.1%0.0
LAL030_a (R)1ACh20.1%0.0
LAL124 (L)1Glu20.1%0.0
LAL010 (R)1ACh20.1%0.0
LAL113 (R)1GABA20.1%0.0
FB1B (R)1Glu20.1%0.0
CRE039_a (L)1Glu20.1%0.0
CRE080_b (R)1ACh20.1%0.0
FB4I (R)1Glu20.1%0.0
GNG134 (R)1ACh20.1%0.0
LAL008 (R)1Glu20.1%0.0
SIP064 (L)1ACh20.1%0.0
SIP004 (R)1ACh20.1%0.0
LHPV8a1 (R)1ACh20.1%0.0
LAL046 (R)1GABA20.1%0.0
VES018 (R)1GABA20.1%0.0
ExR1 (L)1ACh20.1%0.0
LAL108 (R)1Glu20.1%0.0
OA-VUMa8 (M)1OA20.1%0.0
PFNm_b (R)2ACh20.1%0.0
SA3 (L)2Glu20.1%0.0
PS077 (R)2GABA20.1%0.0
CB1355 (R)2ACh20.1%0.0
AVLP752m (R)2ACh20.1%0.0
LAL060_a (R)1GABA10.0%0.0
PS124 (R)1ACh10.0%0.0
LAL121 (R)1Glu10.0%0.0
FB4F_b (R)1Glu10.0%0.0
PFL2 (R)1ACh10.0%0.0
CRE023 (R)1Glu10.0%0.0
DNpe023 (R)1ACh10.0%0.0
SMP157 (R)1ACh10.0%0.0
PS233 (R)1ACh10.0%0.0
LAL199 (R)1ACh10.0%0.0
FB4G (R)1Glu10.0%0.0
PS203 (L)1ACh10.0%0.0
CB2341 (R)1ACh10.0%0.0
LAL042 (L)1Glu10.0%0.0
LAL011 (R)1ACh10.0%0.0
FB4F_c (R)1Glu10.0%0.0
LAL082 (R)1unc10.0%0.0
CRE070 (L)1ACh10.0%0.0
LAL165 (L)1ACh10.0%0.0
SMP040 (R)1Glu10.0%0.0
AVLP579 (L)1ACh10.0%0.0
MBON34 (L)1Glu10.0%0.0
SA1_b (R)1Glu10.0%0.0
AOTU001 (R)1ACh10.0%0.0
CRE037 (L)1Glu10.0%0.0
FB5V_a (R)1Glu10.0%0.0
CRE038 (R)1Glu10.0%0.0
FB5K (R)1Glu10.0%0.0
PS018 (R)1ACh10.0%0.0
PLP222 (L)1ACh10.0%0.0
WED009 (R)1ACh10.0%0.0
LC33 (R)1Glu10.0%0.0
LAL008 (L)1Glu10.0%0.0
FB5V_b (R)1Glu10.0%0.0
LAL056 (R)1GABA10.0%0.0
ATL036 (R)1Glu10.0%0.0
LAL104 (R)1GABA10.0%0.0
CRE059 (L)1ACh10.0%0.0
FB4C (R)1Glu10.0%0.0
ATL044 (R)1ACh10.0%0.0
PLP038 (R)1Glu10.0%0.0
FB4Y (R)15-HT10.0%0.0
FB2D (R)1Glu10.0%0.0
SMP714m (L)1ACh10.0%0.0
PVLP200m_a (R)1ACh10.0%0.0
PLP036 (R)1Glu10.0%0.0
LAL164 (R)1ACh10.0%0.0
LAL185 (R)1ACh10.0%0.0
PS139 (R)1Glu10.0%0.0
PPL108 (L)1DA10.0%0.0
LT51 (R)1Glu10.0%0.0
WED008 (R)1ACh10.0%0.0
WED007 (R)1ACh10.0%0.0
LAL139 (R)1GABA10.0%0.0
DNg97 (L)1ACh10.0%0.0
VES005 (R)1ACh10.0%0.0
PS060 (R)1GABA10.0%0.0
LAL100 (L)1GABA10.0%0.0
LAL015 (R)1ACh10.0%0.0
SMP385 (L)1unc10.0%0.0
PPL108 (R)1DA10.0%0.0
CL333 (L)1ACh10.0%0.0
AVLP562 (R)1ACh10.0%0.0
SMP109 (R)1ACh10.0%0.0
LAL120_a (R)1Glu10.0%0.0
FB5L (R)1Glu10.0%0.0
SMP163 (R)1GABA10.0%0.0
LCNOpm (L)1Glu10.0%0.0
PS013 (R)1ACh10.0%0.0
CRE040 (R)1GABA10.0%0.0
LAL123 (R)1unc10.0%0.0
PS059 (R)1GABA10.0%0.0
MBON20 (R)1GABA10.0%0.0
CRE074 (R)1Glu10.0%0.0
5-HTPMPV03 (L)15-HT10.0%0.0
OA-VUMa6 (M)1OA10.0%0.0

Outputs

downstream
partner
#NTconns
LCNOp
%
Out
CV
PFNp_a (R)34ACh1,87450.2%0.4
PFNp_e (R)11ACh58715.7%0.3
PFNp_b (R)56ACh56915.2%1.0
PFNp_d (R)15ACh46012.3%0.5
PFNp_c (R)13ACh922.5%1.2
PFNm_b (R)4ACh300.8%1.1
LCNOpm (L)1Glu210.6%0.0
OA-VPM3 (R)1OA140.4%0.0
OA-VPM3 (L)1OA120.3%0.0
vDeltaM (R)2ACh70.2%0.4
PFNm_a (R)5ACh70.2%0.3
FB1H (L)1DA50.1%0.0
CRE004 (L)1ACh40.1%0.0
FB1C (R)2DA30.1%0.3
CRE043_a1 (R)1GABA20.1%0.0
PEN_a(PEN1) (R)1ACh20.1%0.0
LAL152 (L)1ACh20.1%0.0
LAL159 (R)1ACh20.1%0.0
FB1C (L)2DA20.1%0.0
CRE200m (L)2Glu20.1%0.0
CB3865 (R)2Glu20.1%0.0
CRE071 (R)1ACh10.0%0.0
CRE041 (R)1GABA10.0%0.0
FB1H (R)1DA10.0%0.0
SMP544 (R)1GABA10.0%0.0
LAL121 (R)1Glu10.0%0.0
LAL134 (R)1GABA10.0%0.0
AOTU025 (R)1ACh10.0%0.0
LAL043_c (R)1GABA10.0%0.0
IB047 (L)1ACh10.0%0.0
LAL043_a (R)1unc10.0%0.0
AVLP579 (L)1ACh10.0%0.0
vDeltaA_a (L)1ACh10.0%0.0
LAL043_b (R)1unc10.0%0.0
CRE068 (R)1ACh10.0%0.0
CRE043_a2 (R)1GABA10.0%0.0
CRE059 (R)1ACh10.0%0.0
SAD047 (R)1Glu10.0%0.0
LAL177 (R)1ACh10.0%0.0
FB2D (R)1Glu10.0%0.0
LAL193 (R)1ACh10.0%0.0
AVLP705m (R)1ACh10.0%0.0
LAL175 (L)1ACh10.0%0.0
DNp52 (R)1ACh10.0%0.0
AN27X013 (R)1unc10.0%0.0
LAL100 (R)1GABA10.0%0.0
LAL137 (R)1ACh10.0%0.0
SMP014 (R)1ACh10.0%0.0
LAL120_a (R)1Glu10.0%0.0
SMP163 (R)1GABA10.0%0.0
PVLP114 (R)1ACh10.0%0.0
CRE040 (R)1GABA10.0%0.0
DNc02 (L)1unc10.0%0.0
OA-VUMa8 (M)1OA10.0%0.0
OA-VUMa1 (M)1OA10.0%0.0