Male CNS – Cell Type Explorer

JO-EV1(R)

50
Neurons
Right: 19 | Left: 31
log ratio : 0.71
3,800
Synapses
Post: 1,533 | Pre: 2,267
log ratio : 0.56
8,079
Connections
Upstream: 1,296 | Downstream: 6,783
log ratio : 2.39
ACh (87.9% CL)
Neurotransmitter
200
Synapses per Neuron
Post: 80.7 | Pre: 119.3
log ratio : 0.56
425.2
Connections per Neuron
Upstream: 68.2 | Downstream: 357
log ratio : 2.39

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (3 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
SAD1,49197.3%0.592,23898.7%
CentralBrain-unspecified302.0%-0.66190.8%
WED(R)120.8%-0.26100.4%

Connectivity

Inputs

upstream
partner
#NTconns
JO-EV1
%
In
CV
CB0986 (R)7GABA12.418.2%0.7
AMMC026 (R)5GABA9.914.5%0.3
SAD113 (R)2GABA811.7%0.4
SAD114 (R)1GABA6.69.6%0.0
SAD030 (R)3GABA4.66.7%0.3
AMMC027 (R)2GABA4.36.2%0.1
CB1942 (R)2GABA3.95.8%0.4
JO-EV113ACh2.53.6%0.5
AMMC015 (R)2GABA2.43.5%1.0
GNG440 (R)4GABA2.23.2%0.5
IPS001 (R)5GABA2.13.1%0.6
WED204 (R)2GABA0.81.2%0.6
WED202 (R)1GABA0.71.0%0.0
SAD112_a (R)1GABA0.71.0%0.0
AMMC021 (R)2GABA0.60.8%0.5
AMMC019 (R)3GABA0.40.6%0.4
JO-EV62ACh0.40.6%0.2
SAD004 (R)3ACh0.40.6%0.4
JO-CM3ACh0.40.5%0.5
AMMC004 (R)3GABA0.40.5%0.2
JO-unclear4ACh0.30.5%0.6
CB2351 (R)1GABA0.30.4%0.0
AMMC018 (R)3GABA0.30.4%0.3
JO-ED2_a1ACh0.20.3%0.0
CB1145 (R)2GABA0.20.3%0.5
CB3646 (R)1ACh0.20.3%0.0
JO-CL3ACh0.20.3%0.4
AMMC011 (R)1ACh0.20.2%0.0
AMMC005 (L)1Glu0.20.2%0.0
SAD093 (R)1ACh0.10.2%0.0
WED207 (R)1GABA0.10.2%0.0
ALIN5 (R)1GABA0.10.2%0.0
WED057 (R)1GABA0.10.2%0.0
JO-ED2_b2ACh0.10.2%0.0
CB2440 (R)2GABA0.10.2%0.0
DNg106 (L)2GABA0.10.2%0.0
JO-EV22ACh0.10.2%0.0
ALIN2 (R)1ACh0.10.2%0.0
JO-EV51ACh0.10.1%0.0
WED080 (L)1GABA0.10.1%0.0
SAD112_b (R)1GABA0.10.1%0.0
SAD080 (R)1Glu0.10.1%0.0
SAD117 (R)1GABA0.10.1%0.0
CB4094 (R)1ACh0.10.1%0.0
SAD077 (R)1Glu0.10.1%0.0
WED055_a (R)1GABA0.10.1%0.0
CB2228 (R)1GABA0.10.1%0.0
SAD078 (R)1unc0.10.1%0.0
AMMC031 (R)1GABA0.10.1%0.0
CB1094 (R)1Glu0.10.1%0.0
SAD051_b (R)1ACh0.10.1%0.0
DNge138 (M)1unc0.10.1%0.0
GNG633 (R)1GABA0.10.1%0.0
CB2558 (R)1ACh0.10.1%0.0
CB3747 (R)1GABA0.10.1%0.0
CB3320 (R)1GABA0.10.1%0.0
AMMC014 (R)1ACh0.10.1%0.0
AMMC023 (L)1GABA0.10.1%0.0
SAD003 (R)1ACh0.10.1%0.0
AN06B090 (L)1GABA0.10.1%0.0
SAD005 (R)1ACh0.10.1%0.0
JO-ED2_c1ACh0.10.1%0.0
AMMC010 (R)1ACh0.10.1%0.0
AMMC025 (R)1GABA0.10.1%0.0
WED031 (R)1GABA0.10.1%0.0
CB0540 (R)1GABA0.10.1%0.0
CB3745 (R)1GABA0.10.1%0.0
SAD072 (R)1GABA0.10.1%0.0

Outputs

downstream
partner
#NTconns
JO-EV1
%
Out
CV
SAD004 (R)5ACh66.718.7%0.3
AMMC026 (R)5GABA23.76.6%0.3
AMMC028 (R)2GABA23.26.5%0.1
DNp73 (R)1ACh16.44.6%0.0
WED203 (R)1GABA13.83.9%0.0
CB0986 (R)7GABA13.63.8%0.5
SAD113 (R)2GABA72.0%0.3
ALIN2 (R)1ACh6.71.9%0.0
AMMC027 (R)2GABA6.71.9%0.2
CB2440 (R)5GABA5.91.7%0.7
SAD114 (R)1GABA5.81.6%0.0
CB4182 (R)1ACh5.51.5%0.0
SAD003 (R)3ACh5.51.5%0.6
SAD077 (R)4Glu5.41.5%0.4
CB2521 (R)1ACh4.71.3%0.0
SAD049 (R)1ACh4.51.3%0.0
SAD030 (R)4GABA4.31.2%0.6
DNg09_a (R)2ACh4.31.2%0.2
DNge111 (R)3ACh4.21.2%0.6
AMMC015 (R)4GABA3.91.1%0.9
CB2431 (R)3GABA3.71.0%0.1
AMMC011 (R)1ACh3.61.0%0.0
SAD034 (R)1ACh3.61.0%0.0
CB1094 (R)5Glu3.51.0%0.5
AMMC021 (R)2GABA3.51.0%0.3
WEDPN8C (R)7ACh3.41.0%0.3
DNg29 (R)1ACh3.20.9%0.0
ALIN6 (R)1GABA3.10.9%0.0
SAD112_a (R)1GABA30.8%0.0
WED208 (R)1GABA2.90.8%0.0
CB1076 (R)2ACh2.90.8%0.4
SAD078 (R)2unc2.80.8%0.7
CB2585 (R)3ACh2.80.8%0.3
ALIN6 (L)1GABA2.70.8%0.0
CB3745 (R)2GABA2.70.8%0.1
JO-EV112ACh2.50.7%0.6
CB3682 (R)1ACh2.30.6%0.0
WED207 (R)3GABA2.20.6%0.6
IPS001 (R)5GABA2.20.6%0.4
WED202 (R)1GABA2.10.6%0.0
CB2940 (R)1ACh2.10.6%0.0
DNg07 (R)7ACh2.10.6%0.8
SAD093 (R)1ACh1.80.5%0.0
AMMC006 (R)4Glu1.70.5%0.8
CB3320 (R)3GABA1.60.5%0.4
CB3743 (R)1GABA1.60.4%0.0
CB3588 (R)1ACh1.50.4%0.0
CB3865 (R)5Glu1.30.4%1.3
DNge181 (R)2ACh1.30.4%0.5
SAD011 (R)3GABA1.30.4%0.7
DNp33 (R)1ACh1.20.3%0.0
DNge145 (R)2ACh1.20.3%0.2
SAD079 (R)1Glu1.10.3%0.0
DNge184 (R)1ACh1.10.3%0.0
DNg09_b (R)1ACh1.10.3%0.0
DNg99 (R)1GABA1.10.3%0.0
CB4104 (R)3ACh1.10.3%0.6
SAD080 (R)1Glu10.3%0.0
SAD052 (R)1ACh10.3%0.0
GNG440 (R)3GABA10.3%0.3
WED069 (R)1ACh0.90.3%0.0
WED099 (R)2Glu0.90.3%0.3
WED057 (R)2GABA0.90.3%0.4
SAD112_b (R)1GABA0.90.3%0.0
CB2153 (R)2ACh0.90.3%0.6
CB2558 (R)5ACh0.90.3%0.7
CB3646 (R)1ACh0.80.2%0.0
SAD116 (R)2Glu0.80.2%0.0
CB0540 (R)1GABA0.80.2%0.0
DNg106 (R)4GABA0.80.2%0.8
CB3588 (L)1ACh0.80.2%0.0
CB3747 (R)1GABA0.80.2%0.0
AMMC005 (L)4Glu0.80.2%0.5
SAD051_b (R)1ACh0.70.2%0.0
CB0591 (R)1ACh0.70.2%0.0
AMMC014 (R)1ACh0.70.2%0.0
SAD112_c (R)1GABA0.70.2%0.0
CB3870 (R)2Glu0.70.2%0.8
CB2081_b (R)2ACh0.70.2%0.2
AMMC007 (L)2Glu0.60.2%0.2
CB3738 (R)1GABA0.60.2%0.0
CB3710 (R)1ACh0.60.2%0.0
WEDPN8B (R)4ACh0.60.2%0.4
WED055_a (R)1GABA0.60.2%0.0
CB3742 (R)1GABA0.60.2%0.0
CB1145 (R)2GABA0.60.2%0.3
DNge091 (R)3ACh0.60.2%0.5
ATL030 (R)1Glu0.50.1%0.0
CB1942 (R)1GABA0.50.1%0.0
CB3581 (R)1ACh0.50.1%0.0
JO-CL3ACh0.50.1%0.4
DNge043 (R)1ACh0.50.1%0.0
SAD005 (R)1ACh0.50.1%0.0
AVLP116 (R)1ACh0.40.1%0.0
CB3870 (L)2Glu0.40.1%0.5
WED204 (R)2GABA0.40.1%0.8
WED167 (R)3ACh0.40.1%0.5
CB0214 (R)1GABA0.40.1%0.0
CB3581 (L)1ACh0.40.1%0.0
WEDPN14 (R)1ACh0.40.1%0.0
AMMC019 (R)3GABA0.40.1%0.2
SAD110 (R)2GABA0.40.1%0.1
SAD107 (R)1GABA0.30.1%0.0
AMMC034_a (R)1ACh0.30.1%0.0
CB2228 (R)1GABA0.30.1%0.0
SAD014 (R)1GABA0.30.1%0.0
AMMC009 (R)1GABA0.30.1%0.0
SAD111 (R)1GABA0.30.1%0.0
AMMC025 (R)1GABA0.30.1%0.0
CB3739 (R)2GABA0.30.1%0.3
JO-EV64ACh0.30.1%0.3
GNG126 (R)1GABA0.30.1%0.0
DNg110 (R)2ACh0.30.1%0.6
AMMC012 (R)1ACh0.30.1%0.0
SAD072 (R)1GABA0.30.1%0.0
JO-ED12ACh0.30.1%0.2
PS312 (R)1Glu0.30.1%0.0
AMMC031 (R)2GABA0.30.1%0.6
CB4094 (R)2ACh0.30.1%0.6
AMMC030 (R)1GABA0.20.1%0.0
CL056 (R)1GABA0.20.1%0.0
AMMC022 (R)1GABA0.20.1%0.0
DNge113 (R)1ACh0.20.1%0.0
SAD076 (R)1Glu0.20.1%0.0
DNge041 (R)1ACh0.20.1%0.0
AMMC035 (R)2GABA0.20.1%0.0
JO-CM2ACh0.20.1%0.5
SAD001 (R)2ACh0.20.1%0.0
AMMC021 (L)1GABA0.20.0%0.0
AMMC032 (R)1GABA0.20.0%0.0
JO-ED2_c1ACh0.20.0%0.0
pIP1 (R)1ACh0.20.0%0.0
SAD019 (R)1GABA0.20.0%0.0
JO-ED2_a2ACh0.20.0%0.3
WED108 (R)1ACh0.20.0%0.0
ALIN5 (R)1GABA0.20.0%0.0
SAD006 (R)1ACh0.20.0%0.0
CB1493 (R)1ACh0.20.0%0.0
AMMC036 (R)1ACh0.20.0%0.0
CB3746 (R)1GABA0.20.0%0.0
CB4176 (R)2GABA0.20.0%0.3
CB1849 (R)2ACh0.20.0%0.3
JO-EV23ACh0.20.0%0.0
JO-unclear3ACh0.20.0%0.0
JO-EV51ACh0.10.0%0.0
GNG144 (R)1GABA0.10.0%0.0
DNg51 (R)1ACh0.10.0%0.0
WED106 (L)1GABA0.10.0%0.0
CB0466 (R)1GABA0.10.0%0.0
AMMC033 (R)1GABA0.10.0%0.0
CB4247 (R)1GABA0.10.0%0.0
DNg06 (R)1ACh0.10.0%0.0
CB3381 (R)1GABA0.10.0%0.0
AMMC018 (R)1GABA0.10.0%0.0
CB2084 (R)1GABA0.10.0%0.0
AMMC006 (L)1Glu0.10.0%0.0
AMMC023 (L)1GABA0.10.0%0.0
PS126 (L)1ACh0.10.0%0.0
AMMC004 (R)1GABA0.10.0%0.0
DNp12 (R)1ACh0.10.0%0.0
CB2309 (R)2ACh0.10.0%0.0
PS234 (R)1ACh0.10.0%0.0
DNg106 (L)1GABA0.10.0%0.0
GNG666 (R)1ACh0.10.0%0.0
JO-EV31ACh0.10.0%0.0
DNg02_a (R)1ACh0.10.0%0.0
JO-ED2_b1ACh0.10.0%0.0
WED031 (R)1GABA0.10.0%0.0
CB1023 (L)1Glu0.10.0%0.0
CB2351 (R)1GABA0.10.0%0.0
ATL030 (L)1Glu0.10.0%0.0
WEDPN12 (R)1Glu0.10.0%0.0
GNG634 (R)1GABA0.10.0%0.0
AMMC037 (R)1GABA0.10.0%0.0
AMMC010 (R)1ACh0.10.0%0.0
AMMC022 (L)1GABA0.10.0%0.0
CB3631 (R)1ACh0.10.0%0.0
GNG308 (R)1Glu0.10.0%0.0
DNge084 (R)1GABA0.10.0%0.0
AMMC011 (L)1ACh0.10.0%0.0
AN06B090 (L)1GABA0.10.0%0.0
DNge090 (R)1ACh0.10.0%0.0
DNg08 (R)1GABA0.10.0%0.0
AMMC005 (R)1Glu0.10.0%0.0
AMMC013 (R)1ACh0.10.0%0.0