Male CNS – Cell Type Explorer

JO-ED2_c

14
Neurons
Right: 5 | Left: 9
log ratio : 0.85
5,301
Synapses
Right: 1,381 | Left: 3,920
log ratio : 1.51
11,553
Connections
Right: 2,697 | Left: 8,856
log ratio : 1.72
ACh (82.6% CL)
Neurotransmitter
378.6
Synapses per Neuron
Right: 276.2 | Left: 435.6
log ratio : 0.66
825.2
Connections per Neuron
Right: 539.4 | Left: 984
log ratio : 0.87

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (3 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
SAD1,93899.0%0.783,32899.6%
CentralBrain-unspecified160.8%-2.0040.1%
WED40.2%1.46110.3%

Connectivity

Inputs

upstream
partner
#NTconns
JO-ED2_c
%
In
CV
AMMC0199GABA25.921.1%0.3
SAD1134GABA13.210.8%0.2
JO-ED2_c14ACh108.2%0.7
CB19424GABA9.57.8%0.3
AMMC0189GABA7.56.1%0.3
SAD112_a2GABA4.63.8%0.0
AMMC0273GABA4.33.5%0.1
AMMC0324GABA3.93.2%0.4
AMMC0254GABA3.63.0%0.4
JO-ED114ACh3.52.9%0.7
SAD1142GABA3.42.7%0.0
CB20844GABA2.92.4%0.5
JO-ED2_b9ACh2.72.2%1.3
AMMC0046GABA2.52.0%0.4
JO-ED2_a14ACh2.42.0%0.9
SAD112_b2GABA21.6%0.0
DNge138 (M)2unc1.81.5%0.5
CB23512GABA1.71.4%0.0
AMMC0078Glu1.41.2%0.6
AMMC0034GABA1.41.1%0.5
AMMC0262GABA1.21.0%0.8
AMMC0213GABA0.90.8%0.1
SAD0302GABA0.90.7%0.0
GNG4402GABA0.80.6%0.0
JO-CM4ACh0.60.5%0.7
CB09865GABA0.60.5%0.6
JO-EV14ACh0.60.5%0.5
CB41764GABA0.60.5%0.3
CB40974Glu0.60.5%0.5
JO-EV64ACh0.50.4%0.2
JO-EV22ACh0.40.4%0.7
AMMC0225GABA0.40.4%0.2
SAD112_c2GABA0.40.4%0.0
AMMC0053Glu0.40.3%0.6
SAD1172GABA0.40.3%0.6
AMMC0331GABA0.30.2%0.0
CB33811GABA0.30.2%0.0
CB37393GABA0.30.2%0.4
CB10943Glu0.30.2%0.2
SAD0931ACh0.20.2%0.0
GNG6341GABA0.20.2%0.0
CB27511GABA0.20.2%0.0
GNG3082Glu0.20.2%0.0
JO-EV51ACh0.10.1%0.0
PS0761GABA0.10.1%0.0
JO-FV2ACh0.10.1%0.0
ALIN21ACh0.10.1%0.0
5-HTPMPV0315-HT0.10.1%0.0
CB38652Glu0.10.1%0.0
ATL0302Glu0.10.1%0.0
CB38702Glu0.10.1%0.0
CB21531ACh0.10.1%0.0
CB24401GABA0.10.1%0.0
AMMC0111ACh0.10.1%0.0
CB05171Glu0.10.1%0.0
MeVC91ACh0.10.1%0.0
JO-DP1ACh0.10.1%0.0
SAD1111GABA0.10.1%0.0
DNge0911ACh0.10.1%0.0
DNge0471unc0.10.1%0.0
WED0991Glu0.10.1%0.0
CB25581ACh0.10.1%0.0
AMMC0281GABA0.10.1%0.0
AMMC0081Glu0.10.1%0.0
LPT591Glu0.10.1%0.0
JO-B4_b1ACh0.10.1%0.0
CB10121Glu0.10.1%0.0
DNc021unc0.10.1%0.0
CB42471GABA0.10.1%0.0
WED1001Glu0.10.1%0.0
PS3121Glu0.10.1%0.0
CB37421GABA0.10.1%0.0
AMMC0201GABA0.10.1%0.0
WEDPN91ACh0.10.1%0.0
JO-CL1ACh0.10.1%0.0
CB02141GABA0.10.1%0.0

Outputs

downstream
partner
#NTconns
JO-ED2_c
%
Out
CV
AMMC0226GABA95.913.6%0.1
AMMC0079Glu7911.2%0.4
AMMC0068Glu38.15.4%0.4
AMMC01910GABA32.14.6%0.3
CB36464ACh30.14.3%0.5
DNg0714ACh25.93.7%0.5
SAD0777Glu21.63.1%0.4
CB35812ACh20.42.9%0.0
DNge0918ACh13.61.9%1.1
SAD0342ACh12.81.8%0.0
SAD0049ACh12.21.7%0.5
AMMC0372GABA11.91.7%0.0
CB33206GABA11.31.6%0.2
PS3122Glu111.6%0.0
CB37397GABA10.81.5%0.6
CB35882ACh10.71.5%0.0
JO-ED2_c13ACh101.4%0.6
CB10948Glu9.91.4%0.9
AMMC0233GABA9.41.3%0.6
AMMC00511Glu8.91.3%0.9
AMMC0324GABA8.31.2%0.3
MeVC92ACh7.91.1%0.0
AMMC0273GABA6.81.0%0.1
DNge0842GABA6.60.9%0.0
CB38659Glu6.50.9%0.7
WEDPN92ACh6.30.9%0.0
GNG3082Glu6.20.9%0.0
GNG1262GABA6.10.9%0.0
DNb052ACh5.50.8%0.0
AMMC0257GABA5.40.8%0.9
CB21534ACh5.10.7%0.5
SAD1134GABA50.7%0.2
AMMC0265GABA4.80.7%0.8
WED264GABA4.60.7%0.1
DNg063ACh40.6%0.6
CB37412GABA40.6%0.0
AMMC0188GABA3.90.6%0.3
ALIN22ACh3.80.5%0.0
CB37423GABA3.70.5%0.4
WED1004Glu3.70.5%0.5
DNge138 (M)2unc3.60.5%0.6
JO-ED2_b12ACh3.60.5%0.7
SAD112_a2GABA3.60.5%0.0
DNg992GABA3.50.5%0.0
DNge1115ACh3.50.5%0.6
DNge1454ACh3.50.5%0.5
CB25585ACh3.40.5%1.0
JO-ED114ACh3.20.5%0.6
AMMC0214GABA3.10.4%0.6
DNbe0012ACh3.10.4%0.0
WED2032GABA30.4%0.0
CB38704Glu30.4%0.5
OCG061ACh2.90.4%0.0
CB40942ACh2.80.4%0.0
PS0763GABA2.70.4%0.1
DNp121ACh2.40.3%0.0
CB20844GABA2.40.3%0.5
AMMC0046GABA2.10.3%0.4
SAD112_b2GABA2.10.3%0.0
AMMC0332GABA20.3%0.0
CB05172Glu1.90.3%0.0
WED0993Glu1.90.3%0.5
CB36312ACh1.90.3%0.0
IB0962Glu1.60.2%0.0
CB40976Glu1.50.2%0.6
CB10304ACh1.40.2%0.3
SAD112_c2GABA1.40.2%0.0
SAD0762Glu1.40.2%0.0
ALIN52GABA1.40.2%0.0
CB33812GABA1.40.2%0.0
JO-ED2_a12ACh1.30.2%0.6
CB41764GABA1.30.2%0.8
AMMC0206GABA1.30.2%0.1
CB19424GABA1.20.2%0.1
ATL0302Glu1.20.2%0.0
CB10762ACh1.10.2%0.0
PS0801Glu1.10.2%0.0
AMMC0035GABA1.10.2%0.5
DNg1063GABA10.1%0.3
CB09865GABA10.1%0.4
SAD1142GABA0.90.1%0.0
CB23512GABA0.90.1%0.0
SAD0302GABA0.90.1%0.0
CB24313GABA0.90.1%0.1
DNge0432ACh0.90.1%0.0
AMMC0121ACh0.80.1%0.0
JO-CM7ACh0.80.1%0.7
DNp192ACh0.80.1%0.0
WED2073GABA0.80.1%0.5
GNG4402GABA0.80.1%0.0
CB42471GABA0.70.1%0.0
CB07583GABA0.70.1%0.3
CB24404GABA0.70.1%0.4
SAD0932ACh0.70.1%0.0
DNg09_a1ACh0.60.1%0.0
SAD1112GABA0.60.1%0.0
CB25212ACh0.60.1%0.0
AMMC0132ACh0.60.1%0.0
SAD1071GABA0.60.1%0.0
5-HTPMPV0315-HT0.60.1%0.0
CB06302ACh0.60.1%0.0
AMMC0313GABA0.60.1%0.2
IB0972Glu0.60.1%0.0
CB24751ACh0.50.1%0.0
AMMC034_b1ACh0.50.1%0.0
CB27891ACh0.50.1%0.0
CB26642ACh0.50.1%0.0
WED143_c3ACh0.50.1%0.0
GNG3122Glu0.50.1%0.0
DNp102ACh0.50.1%0.0
WED0254GABA0.50.1%0.3
CB10122Glu0.40.1%0.3
AMMC0382GABA0.40.1%0.0
WED0801GABA0.40.1%0.0
JO-EV23ACh0.40.1%0.6
CB26532Glu0.40.1%0.0
DNge0901ACh0.30.0%0.0
AN01A0891ACh0.30.0%0.0
pIP11ACh0.30.0%0.0
SAD0801Glu0.30.0%0.0
DNp731ACh0.30.0%0.0
WED143_d1ACh0.30.0%0.0
JO-EV14ACh0.30.0%0.0
GNG6381GABA0.30.0%0.0
CB15852ACh0.30.0%0.0
SAD0032ACh0.30.0%0.0
AMMC0021GABA0.20.0%0.0
CB41431GABA0.20.0%0.0
WED0981Glu0.20.0%0.0
SAD1171GABA0.20.0%0.0
OCC01b1ACh0.20.0%0.0
GNG4281Glu0.20.0%0.0
JO-EV62ACh0.20.0%0.3
AMMC0152GABA0.20.0%0.0
CB14932ACh0.20.0%0.0
DNge0162ACh0.20.0%0.0
GNG1441GABA0.10.0%0.0
CB27511GABA0.10.0%0.0
AN07B0041ACh0.10.0%0.0
AMMC0301GABA0.10.0%0.0
SAD0521ACh0.10.0%0.0
SAD0721GABA0.10.0%0.0
CB42281ACh0.10.0%0.0
CB27101ACh0.10.0%0.0
AMMC0081Glu0.10.0%0.0
SAD0791Glu0.10.0%0.0
GNG6341GABA0.10.0%0.0
AMMC0111ACh0.10.0%0.0
DNg081GABA0.10.0%0.0
SAD1161Glu0.10.0%0.0
DNp311ACh0.10.0%0.0
SAD0471Glu0.10.0%0.0
LPT591Glu0.10.0%0.0
SAD051_b2ACh0.10.0%0.0
CB40382ACh0.10.0%0.0
CB03071GABA0.10.0%0.0
CB22051ACh0.10.0%0.0
CB05911ACh0.10.0%0.0
WED0041ACh0.10.0%0.0
DNb041Glu0.10.0%0.0
AMMC0141ACh0.10.0%0.0
CB37981GABA0.10.0%0.0
AN07B101_a1ACh0.10.0%0.0
WED143_a1ACh0.10.0%0.0
JO-FV1ACh0.10.0%0.0
LAL0641ACh0.10.0%0.0
DNpe0321ACh0.10.0%0.0
CB40371ACh0.10.0%0.0
JO-CL1ACh0.10.0%0.0
AMMC0091GABA0.10.0%0.0
JO-mz1ACh0.10.0%0.0
CB1394_a1Glu0.10.0%0.0
CB10231Glu0.10.0%0.0
CB05331ACh0.10.0%0.0
AMMC0241GABA0.10.0%0.0
DNge0471unc0.10.0%0.0
JO-unclear1ACh0.10.0%0.0
AMMC0291GABA0.10.0%0.0
GNG6581ACh0.10.0%0.0
WED2021GABA0.10.0%0.0
SAD1101GABA0.10.0%0.0
CB3673b1ACh0.10.0%0.0