Male CNS – Cell Type Explorer

INXXX456(R)[A8]{TBD}

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
601
Total Synapses
Post: 415 | Pre: 186
log ratio : -1.16
601
Mean Synapses
Post: 415 | Pre: 186
log ratio : -1.16
ACh(95.3% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (1 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
ANm415100.0%-1.16186100.0%

Connectivity

Inputs

upstream
partner
#NTconns
INXXX456
%
In
CV
INXXX197 (L)1GABA4612.1%0.0
INXXX197 (R)1GABA3910.2%0.0
INXXX303 (L)1GABA297.6%0.0
INXXX149 (L)3ACh287.3%1.3
INXXX149 (R)1ACh236.0%0.0
INXXX279 (L)2Glu195.0%0.6
INXXX279 (R)2Glu184.7%0.6
SNxx092ACh153.9%0.7
INXXX372 (L)2GABA82.1%0.5
INXXX378 (L)2Glu82.1%0.5
INXXX209 (L)2unc71.8%0.1
INXXX474 (L)2GABA71.8%0.1
INXXX369 (L)3GABA71.8%0.5
INXXX442 (R)1ACh61.6%0.0
IN06A031 (L)1GABA51.3%0.0
ANXXX196 (L)1ACh51.3%0.0
INXXX372 (R)2GABA51.3%0.6
INXXX350 (R)2ACh51.3%0.6
INXXX378 (R)2Glu51.3%0.2
INXXX474 (R)2GABA51.3%0.2
INXXX293 (L)2unc41.0%0.5
IN14A020 (R)2Glu41.0%0.5
INXXX302 (L)2ACh41.0%0.5
INXXX473 (R)2GABA41.0%0.0
INXXX290 (L)2unc41.0%0.0
INXXX456 (L)1ACh30.8%0.0
SNxx081ACh30.8%0.0
INXXX228 (L)1ACh30.8%0.0
INXXX421 (R)1ACh30.8%0.0
INXXX283 (R)2unc30.8%0.3
INXXX283 (L)2unc30.8%0.3
INXXX442 (L)2ACh30.8%0.3
INXXX290 (R)2unc30.8%0.3
INXXX473 (L)2GABA30.8%0.3
INXXX217 (R)1GABA20.5%0.0
INXXX379 (R)1ACh20.5%0.0
INXXX267 (L)1GABA20.5%0.0
SNxx071ACh20.5%0.0
INXXX382_b (R)1GABA20.5%0.0
INXXX382_b (L)1GABA20.5%0.0
IN01A043 (R)1ACh20.5%0.0
INXXX267 (R)1GABA20.5%0.0
ANXXX084 (R)2ACh20.5%0.0
IN10B010 (L)1ACh10.3%0.0
INXXX329 (R)1Glu10.3%0.0
INXXX303 (R)1GABA10.3%0.0
INXXX353 (R)1ACh10.3%0.0
INXXX448 (L)1GABA10.3%0.0
INXXX317 (L)1Glu10.3%0.0
INXXX302 (R)1ACh10.3%0.0
INXXX240 (R)1ACh10.3%0.0
INXXX446 (R)1ACh10.3%0.0
INXXX293 (R)1unc10.3%0.0
INXXX244 (R)1unc10.3%0.0
ANXXX150 (R)1ACh10.3%0.0
SNxx171ACh10.3%0.0
INXXX399 (L)1GABA10.3%0.0
INXXX399 (R)1GABA10.3%0.0
INXXX243 (R)1GABA10.3%0.0
INXXX258 (R)1GABA10.3%0.0
IN14B008 (R)1Glu10.3%0.0
INXXX217 (L)1GABA10.3%0.0
INXXX350 (L)1ACh10.3%0.0
INXXX352 (L)1ACh10.3%0.0
INXXX209 (R)1unc10.3%0.0
INXXX137 (L)1ACh10.3%0.0
ANXXX254 (L)1ACh10.3%0.0
DNg66 (M)1unc10.3%0.0
DNd04 (R)1Glu10.3%0.0

Outputs

downstream
partner
#NTconns
INXXX456
%
Out
CV
MNad66 (L)1unc396.6%0.0
INXXX197 (L)1GABA264.4%0.0
INXXX209 (L)2unc244.1%0.3
INXXX212 (L)2ACh233.9%0.1
INXXX348 (L)2GABA223.7%0.5
INXXX293 (L)2unc223.7%0.1
IN06A031 (L)1GABA213.6%0.0
ANXXX150 (L)2ACh213.6%0.1
IN06A031 (R)1GABA142.4%0.0
MNad65 (L)1unc142.4%0.0
INXXX474 (R)2GABA142.4%0.0
INXXX137 (L)1ACh132.2%0.0
INXXX372 (L)2GABA132.2%0.7
INXXX279 (L)2Glu132.2%0.7
INXXX231 (L)3ACh132.2%0.1
MNad66 (R)1unc122.0%0.0
MNad15 (L)2unc122.0%0.8
INXXX197 (R)2GABA122.0%0.5
MNad65 (R)1unc101.7%0.0
ANXXX150 (R)2ACh101.7%0.2
EN00B020 (M)1unc91.5%0.0
MNad19 (R)1unc91.5%0.0
INXXX279 (R)2Glu91.5%0.3
INXXX416 (L)2unc91.5%0.1
INXXX303 (L)1GABA81.4%0.0
INXXX442 (R)2ACh71.2%0.1
INXXX293 (R)2unc71.2%0.1
INXXX372 (R)2GABA71.2%0.1
INXXX403 (L)1GABA50.9%0.0
INXXX309 (L)1GABA50.9%0.0
INXXX137 (R)1ACh50.9%0.0
INXXX149 (R)1ACh50.9%0.0
INXXX442 (L)2ACh50.9%0.6
IN14A020 (R)2Glu50.9%0.6
INXXX474 (L)2GABA50.9%0.6
EN00B016 (M)2unc50.9%0.2
INXXX209 (R)2unc50.9%0.2
ANXXX084 (R)2ACh50.9%0.2
INXXX416 (R)1unc40.7%0.0
INXXX275 (L)1ACh40.7%0.0
INXXX302 (L)1ACh40.7%0.0
MNad19 (L)1unc40.7%0.0
INXXX258 (L)2GABA40.7%0.5
MNad20 (L)2unc40.7%0.0
INXXX273 (R)2ACh40.7%0.0
ANXXX084 (L)2ACh40.7%0.0
INXXX052 (R)1ACh30.5%0.0
INXXX388 (R)1GABA30.5%0.0
ANXXX196 (L)1ACh30.5%0.0
AN09B037 (L)1unc30.5%0.0
EN00B010 (M)2unc30.5%0.3
INXXX149 (L)2ACh30.5%0.3
INXXX456 (L)1ACh20.3%0.0
INXXX273 (L)1ACh20.3%0.0
INXXX302 (R)1ACh20.3%0.0
INXXX230 (R)1GABA20.3%0.0
INXXX181 (R)1ACh20.3%0.0
INXXX407 (L)1ACh20.3%0.0
INXXX473 (L)1GABA20.3%0.0
INXXX382_b (L)1GABA20.3%0.0
INXXX473 (R)1GABA20.3%0.0
IN14A020 (L)1Glu20.3%0.0
INXXX301 (R)1ACh20.3%0.0
INXXX188 (L)1GABA20.3%0.0
INXXX228 (R)1ACh20.3%0.0
INXXX267 (L)1GABA20.3%0.0
MNad17 (R)1ACh20.3%0.0
IN01A045 (L)1ACh20.3%0.0
IN18B033 (R)1ACh20.3%0.0
IN06A064 (L)1GABA20.3%0.0
INXXX217 (R)1GABA20.3%0.0
ANXXX254 (L)1ACh20.3%0.0
AN09B037 (R)1unc20.3%0.0
INXXX262 (L)1ACh10.2%0.0
INXXX269 (L)1ACh10.2%0.0
INXXX351 (L)1GABA10.2%0.0
MNad50 (R)1unc10.2%0.0
INXXX405 (R)1ACh10.2%0.0
INXXX230 (L)1GABA10.2%0.0
INXXX267 (R)1GABA10.2%0.0
INXXX421 (L)1ACh10.2%0.0
MNad62 (R)1unc10.2%0.0
INXXX317 (L)1Glu10.2%0.0
MNad67 (L)1unc10.2%0.0
INXXX260 (R)1ACh10.2%0.0
INXXX431 (L)1ACh10.2%0.0
EN00B012 (M)1unc10.2%0.0
INXXX345 (R)1GABA10.2%0.0
INXXX394 (L)1GABA10.2%0.0
INXXX263 (L)1GABA10.2%0.0
INXXX348 (R)1GABA10.2%0.0
EN00B004 (M)1unc10.2%0.0
INXXX247 (L)1ACh10.2%0.0
INXXX283 (R)1unc10.2%0.0
INXXX382_b (R)1GABA10.2%0.0
INXXX231 (R)1ACh10.2%0.0
INXXX258 (R)1GABA10.2%0.0
IN05B013 (R)1GABA10.2%0.0
INXXX265 (L)1ACh10.2%0.0
INXXX217 (L)1GABA10.2%0.0
MNad67 (R)1unc10.2%0.0
INXXX352 (L)1ACh10.2%0.0
INXXX290 (L)1unc10.2%0.0
MNad64 (L)1GABA10.2%0.0
MNad61 (L)1unc10.2%0.0