Male CNS – Cell Type Explorer

INXXX374(R)[A9]{TBD}

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
1,050
Total Synapses
Post: 706 | Pre: 344
log ratio : -1.04
1,050
Mean Synapses
Post: 706 | Pre: 344
log ratio : -1.04
GABA(88.2% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (3 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
ANm70099.2%-1.0733497.1%
VNC-unspecified60.8%0.74102.9%
AbNT(R)00.0%0.0000.0%

Connectivity

Inputs

upstream
partner
#NTconns
INXXX374
%
In
CV
INXXX244 (L)1unc11516.8%0.0
IN10B010 (L)1ACh8512.4%0.0
INXXX244 (R)1unc659.5%0.0
INXXX353 (L)2ACh639.2%0.0
INXXX273 (R)2ACh608.7%0.0
IN10B010 (R)1ACh517.4%0.0
SNxx173ACh476.9%0.8
INXXX273 (L)2ACh456.6%0.7
INXXX197 (R)1GABA284.1%0.0
INXXX197 (L)1GABA172.5%0.0
INXXX378 (R)2Glu111.6%0.1
INXXX149 (R)2ACh91.3%0.3
INXXX378 (L)2Glu91.3%0.1
SNch013ACh81.2%0.4
INXXX283 (R)3unc81.2%0.2
INXXX293 (L)2unc71.0%0.4
INXXX209 (L)2unc60.9%0.0
SNxx201ACh50.7%0.0
INXXX209 (R)2unc50.7%0.2
INXXX374 (L)1GABA40.6%0.0
INXXX279 (R)1Glu30.4%0.0
INXXX265 (L)1ACh30.4%0.0
INXXX271 (R)1Glu30.4%0.0
INXXX283 (L)2unc30.4%0.3
INXXX350 (L)1ACh20.3%0.0
DNpe036 (L)1ACh20.3%0.0
DNg70 (R)1GABA20.3%0.0
IN00A027 (M)2GABA20.3%0.0
INXXX302 (R)1ACh10.1%0.0
INXXX293 (R)1unc10.1%0.0
INXXX441 (R)1unc10.1%0.0
INXXX275 (R)1ACh10.1%0.0
INXXX326 (L)1unc10.1%0.0
INXXX386 (R)1Glu10.1%0.0
IN09A005 (L)1unc10.1%0.0
INXXX350 (R)1ACh10.1%0.0
INXXX406 (R)1GABA10.1%0.0
INXXX290 (L)1unc10.1%0.0
INXXX267 (L)1GABA10.1%0.0
INXXX263 (R)1GABA10.1%0.0
INXXX263 (L)1GABA10.1%0.0
INXXX351 (R)1GABA10.1%0.0
IN14A020 (L)1Glu10.1%0.0
INXXX262 (R)1ACh10.1%0.0
IN01A045 (L)1ACh10.1%0.0
INXXX137 (L)1ACh10.1%0.0

Outputs

downstream
partner
#NTconns
INXXX374
%
Out
CV
EN00B010 (M)4unc44142.6%0.2
IN10B010 (L)1ACh706.8%0.0
INXXX378 (R)2Glu585.6%0.3
IN10B010 (R)1ACh474.5%0.0
INXXX244 (L)1unc363.5%0.0
INXXX378 (L)2Glu333.2%0.3
INXXX149 (R)3ACh313.0%1.1
INXXX149 (L)3ACh252.4%0.6
INXXX244 (R)1unc242.3%0.0
EN00B016 (M)3unc242.3%0.4
INXXX473 (R)2GABA201.9%0.7
SNxx173ACh171.6%0.4
INXXX283 (R)3unc171.6%0.2
INXXX137 (L)1ACh141.4%0.0
INXXX441 (R)2unc141.4%0.9
INXXX382_b (R)2GABA141.4%0.4
INXXX283 (L)2unc141.4%0.3
IN06A031 (L)1GABA131.3%0.0
INXXX441 (L)1unc111.1%0.0
IN06A031 (R)1GABA111.1%0.0
INXXX302 (L)2ACh90.9%0.1
INXXX197 (L)2GABA80.8%0.8
MNad09 (R)2unc80.8%0.5
INXXX197 (R)2GABA80.8%0.5
EN00B012 (M)1unc70.7%0.0
MNad09 (L)3unc70.7%0.5
MNad07 (L)2unc50.5%0.2
MNad07 (R)3unc50.5%0.6
INXXX352 (R)1ACh40.4%0.0
INXXX474 (R)2GABA40.4%0.5
INXXX249 (L)1ACh30.3%0.0
INXXX273 (L)2ACh30.3%0.3
MNad50 (R)1unc20.2%0.0
INXXX372 (R)1GABA20.2%0.0
INXXX350 (R)1ACh20.2%0.0
MNad22 (R)1unc20.2%0.0
INXXX265 (L)2ACh20.2%0.0
INXXX382_b (L)1GABA10.1%0.0
INXXX379 (R)1ACh10.1%0.0
INXXX317 (R)1Glu10.1%0.0
MNad66 (R)1unc10.1%0.0
INXXX309 (R)1GABA10.1%0.0
INXXX209 (L)1unc10.1%0.0
MNad13 (L)1unc10.1%0.0
INXXX431 (R)1ACh10.1%0.0
INXXX326 (L)1unc10.1%0.0
EN00B013 (M)1unc10.1%0.0
INXXX370 (L)1ACh10.1%0.0
INXXX241 (R)1ACh10.1%0.0
INXXX269 (R)1ACh10.1%0.0
INXXX256 (R)1GABA10.1%0.0
MNad53 (R)1unc10.1%0.0
INXXX267 (R)1GABA10.1%0.0
INXXX231 (R)1ACh10.1%0.0
IN00A027 (M)1GABA10.1%0.0
INXXX209 (R)1unc10.1%0.0
INXXX034 (M)1unc10.1%0.0
ANXXX150 (L)1ACh10.1%0.0