Male CNS – Cell Type Explorer

INXXX336(R)[A9]{TBD}

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
1,567
Total Synapses
Post: 1,235 | Pre: 332
log ratio : -1.90
1,567
Mean Synapses
Post: 1,235 | Pre: 332
log ratio : -1.90
GABA(86.8% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (3 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
ANm1,22999.5%-1.89332100.0%
VNC-unspecified40.3%-inf00.0%
AbNT(R)20.2%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
INXXX336
%
In
CV
DNp58 (L)1ACh23019.3%0.0
INXXX319 (L)1GABA14612.2%0.0
DNp58 (R)1ACh12310.3%0.0
INXXX319 (R)1GABA12110.1%0.0
DNg80 (L)1Glu1038.6%0.0
DNg80 (R)1Glu958.0%0.0
INXXX239 (R)2ACh887.4%0.1
INXXX239 (L)2ACh726.0%0.3
MNad17 (L)3ACh322.7%0.4
IN09A005 (R)1unc201.7%0.0
MNad17 (R)1ACh161.3%0.0
INXXX221 (R)2unc151.3%0.9
INXXX329 (R)2Glu110.9%0.3
INXXX221 (L)2unc100.8%0.0
INXXX329 (L)2Glu90.8%0.3
IN10B011 (R)1ACh80.7%0.0
IN09A005 (L)2unc80.7%0.2
INXXX377 (L)1Glu70.6%0.0
DNp48 (R)1ACh70.6%0.0
DNp48 (L)1ACh70.6%0.0
DNpe036 (L)1ACh60.5%0.0
INXXX452 (R)1GABA40.3%0.0
MNad13 (L)1unc40.3%0.0
AN09B018 (R)1ACh30.3%0.0
INXXX386 (R)2Glu30.3%0.3
INXXX452 (L)2GABA30.3%0.3
INXXX409 (R)1GABA20.2%0.0
MNad12 (R)1unc20.2%0.0
SNxx201ACh20.2%0.0
INXXX345 (L)1GABA20.2%0.0
INXXX343 (L)1GABA20.2%0.0
INXXX184 (L)1ACh20.2%0.0
INXXX167 (L)1ACh20.2%0.0
IN10B011 (L)1ACh20.2%0.0
DNc01 (R)1unc20.2%0.0
DNc01 (L)1unc20.2%0.0
INXXX386 (L)2Glu20.2%0.0
INXXX328 (R)2GABA20.2%0.0
INXXX283 (L)1unc10.1%0.0
SNch011ACh10.1%0.0
INXXX077 (L)1ACh10.1%0.0
INXXX418 (R)1GABA10.1%0.0
INXXX288 (R)1ACh10.1%0.0
IN14A029 (R)1unc10.1%0.0
INXXX343 (R)1GABA10.1%0.0
MNad12 (L)1unc10.1%0.0
INXXX385 (L)1GABA10.1%0.0
IN05B013 (L)1GABA10.1%0.0
INXXX158 (R)1GABA10.1%0.0
INXXX223 (L)1ACh10.1%0.0
INXXX184 (R)1ACh10.1%0.0
INXXX077 (R)1ACh10.1%0.0
AN09B037 (R)1unc10.1%0.0
DNge151 (M)1unc10.1%0.0
DNg33 (L)1ACh10.1%0.0
DNc02 (L)1unc10.1%0.0

Outputs

downstream
partner
#NTconns
INXXX336
%
Out
CV
MNad22 (R)1unc17415.5%0.0
MNad22 (L)1unc16214.4%0.0
INXXX183 (R)1GABA11610.3%0.0
INXXX183 (L)1GABA11410.2%0.0
INXXX239 (L)2ACh958.5%0.2
MNad17 (L)4ACh827.3%0.9
INXXX239 (R)2ACh797.0%0.1
MNad17 (R)2ACh736.5%0.5
MNad04,MNad48 (R)3unc464.1%0.3
MNad04,MNad48 (L)2unc393.5%0.1
AN09B037 (L)2unc302.7%0.3
AN09B037 (R)2unc302.7%0.1
INXXX343 (R)1GABA90.8%0.0
DNg80 (L)1Glu70.6%0.0
MNad69 (L)1unc60.5%0.0
INXXX345 (L)1GABA60.5%0.0
MNad12 (L)1unc50.4%0.0
MNad12 (R)2unc50.4%0.6
EN00B027 (M)2unc50.4%0.6
INXXX343 (L)1GABA40.4%0.0
INXXX345 (R)1GABA40.4%0.0
INXXX184 (L)1ACh30.3%0.0
IN10B011 (R)1ACh30.3%0.0
INXXX418 (R)2GABA30.3%0.3
MNad13 (R)1unc20.2%0.0
INXXX319 (R)1GABA20.2%0.0
INXXX137 (L)1ACh20.2%0.0
IN10B011 (L)1ACh20.2%0.0
INXXX409 (R)2GABA20.2%0.0
IN09A005 (R)1unc10.1%0.0
INXXX386 (L)1Glu10.1%0.0
INXXX328 (R)1GABA10.1%0.0
INXXX077 (L)1ACh10.1%0.0
MNad07 (R)1unc10.1%0.0
MNad69 (R)1unc10.1%0.0
INXXX221 (L)1unc10.1%0.0
INXXX388 (L)1GABA10.1%0.0
INXXX221 (R)1unc10.1%0.0
INXXX319 (L)1GABA10.1%0.0
INXXX184 (R)1ACh10.1%0.0
DNc01 (R)1unc10.1%0.0
DNpe036 (L)1ACh10.1%0.0