Male CNS – Cell Type Explorer

INXXX240(R)[A8]{TBD}

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
2,551
Total Synapses
Post: 1,557 | Pre: 994
log ratio : -0.65
2,551
Mean Synapses
Post: 1,557 | Pre: 994
log ratio : -0.65
ACh(88.0% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (3 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
ANm1,54399.1%-0.6598198.7%
VNC-unspecified100.6%0.38131.3%
AbNT(R)40.3%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
INXXX240
%
In
CV
SNxx173ACh31921.2%0.1
INXXX271 (R)2Glu17211.4%0.3
INXXX149 (L)2ACh1228.1%0.3
INXXX197 (R)2GABA916.0%0.9
IN14A020 (L)3Glu724.8%0.4
IN02A030 (R)2Glu543.6%0.0
SNxx0710ACh513.4%0.8
INXXX197 (L)2GABA503.3%0.9
INXXX352 (R)2ACh432.9%0.2
INXXX370 (L)2ACh422.8%0.3
INXXX369 (L)3GABA352.3%0.7
IN00A033 (M)2GABA291.9%0.4
INXXX267 (L)2GABA251.7%0.3
INXXX273 (L)1ACh231.5%0.0
IN27X001 (L)1GABA211.4%0.0
INXXX149 (R)3ACh171.1%0.7
INXXX209 (R)2unc171.1%0.2
INXXX370 (R)3ACh171.1%0.3
INXXX324 (R)1Glu151.0%0.0
INXXX474 (R)2GABA130.9%0.8
IN01A045 (R)3ACh130.9%0.9
INXXX240 (L)1ACh100.7%0.0
INXXX263 (L)2GABA100.7%0.4
IN10B010 (L)1ACh90.6%0.0
INXXX297 (R)2ACh90.6%0.3
DNg102 (L)2GABA90.6%0.1
INXXX317 (R)1Glu80.5%0.0
INXXX267 (R)2GABA80.5%0.8
INXXX418 (L)2GABA80.5%0.0
INXXX393 (R)1ACh70.5%0.0
IN00A024 (M)1GABA70.5%0.0
IN00A027 (M)1GABA70.5%0.0
INXXX279 (L)2Glu70.5%0.4
INXXX209 (L)2unc70.5%0.4
INXXX360 (R)1GABA60.4%0.0
IN01A065 (L)1ACh60.4%0.0
INXXX372 (R)2GABA60.4%0.7
INXXX382_b (R)1GABA50.3%0.0
INXXX225 (R)1GABA50.3%0.0
SNxx092ACh50.3%0.6
INXXX326 (R)3unc50.3%0.6
INXXX473 (R)2GABA50.3%0.2
IN23B042 (L)1ACh40.3%0.0
SNch011ACh40.3%0.0
INXXX293 (L)1unc40.3%0.0
DNg50 (L)1ACh40.3%0.0
INXXX326 (L)2unc40.3%0.5
IN01A045 (L)2ACh40.3%0.5
INXXX231 (R)1ACh30.2%0.0
IN01A043 (R)1ACh30.2%0.0
INXXX262 (R)1ACh30.2%0.0
INXXX283 (R)1unc30.2%0.0
INXXX290 (L)1unc30.2%0.0
INXXX137 (L)1ACh30.2%0.0
SNxx112ACh30.2%0.3
INXXX279 (R)2Glu30.2%0.3
IN01A043 (L)2ACh30.2%0.3
INXXX378 (R)1Glu20.1%0.0
INXXX283 (L)1unc20.1%0.0
INXXX244 (L)1unc20.1%0.0
INXXX442 (R)1ACh20.1%0.0
INXXX275 (R)1ACh20.1%0.0
SNxx201ACh20.1%0.0
INXXX265 (L)1ACh20.1%0.0
IN07B061 (R)1Glu20.1%0.0
INXXX282 (L)1GABA20.1%0.0
INXXX399 (R)1GABA20.1%0.0
INXXX228 (R)1ACh20.1%0.0
INXXX263 (R)1GABA20.1%0.0
INXXX346 (L)1GABA20.1%0.0
INXXX084 (R)1ACh20.1%0.0
ANXXX196 (L)1ACh20.1%0.0
DNg70 (R)1GABA20.1%0.0
SNxx082ACh20.1%0.0
INXXX399 (L)2GABA20.1%0.0
INXXX303 (R)1GABA10.1%0.0
INXXX292 (L)1GABA10.1%0.0
INXXX287 (R)1GABA10.1%0.0
INXXX181 (R)1ACh10.1%0.0
INXXX293 (R)1unc10.1%0.0
INXXX244 (R)1unc10.1%0.0
INXXX237 (L)1ACh10.1%0.0
IN14A029 (R)1unc10.1%0.0
INXXX446 (L)1ACh10.1%0.0
IN14A029 (L)1unc10.1%0.0
SNxx231ACh10.1%0.0
INXXX393 (L)1ACh10.1%0.0
INXXX268 (R)1GABA10.1%0.0
INXXX418 (R)1GABA10.1%0.0
INXXX474 (L)1GABA10.1%0.0
INXXX275 (L)1ACh10.1%0.0
INXXX290 (R)1unc10.1%0.0
INXXX322 (R)1ACh10.1%0.0
INXXX215 (R)1ACh10.1%0.0
INXXX045 (R)1unc10.1%0.0
INXXX273 (R)1ACh10.1%0.0
IN12B010 (L)1GABA10.1%0.0
INXXX246 (L)1ACh10.1%0.0
INXXX257 (R)1GABA10.1%0.0
INXXX052 (L)1ACh10.1%0.0
DNge136 (L)1GABA10.1%0.0
DNg66 (M)1unc10.1%0.0
DNge136 (R)1GABA10.1%0.0
DNg70 (L)1GABA10.1%0.0
DNg98 (R)1GABA10.1%0.0

Outputs

downstream
partner
#NTconns
INXXX240
%
Out
CV
INXXX352 (R)2ACh29613.0%0.0
INXXX231 (R)4ACh24710.8%0.6
INXXX297 (R)4ACh1185.2%0.6
INXXX212 (R)2ACh1165.1%0.4
INXXX137 (L)1ACh1124.9%0.0
INXXX197 (R)1GABA1014.4%0.0
INXXX149 (R)3ACh1014.4%1.3
INXXX350 (R)2ACh904.0%0.2
INXXX137 (R)1ACh683.0%0.0
INXXX379 (R)1ACh602.6%0.0
EN00B020 (M)1unc582.5%0.0
INXXX244 (L)1unc542.4%0.0
ANXXX099 (R)1ACh542.4%0.0
SNxx0712ACh542.4%0.4
IN06A098 (R)2GABA532.3%0.7
MNad66 (R)1unc512.2%0.0
INXXX244 (R)1unc482.1%0.0
MNad66 (L)1unc401.8%0.0
IN01A045 (R)3ACh271.2%1.1
IN16B049 (R)2Glu231.0%0.9
ANXXX099 (L)1ACh190.8%0.0
INXXX217 (R)3GABA190.8%0.1
INXXX212 (L)1ACh180.8%0.0
IN01A043 (R)2ACh170.7%0.3
INXXX197 (L)1GABA160.7%0.0
MNad65 (R)1unc160.7%0.0
IN00A033 (M)2GABA160.7%0.6
INXXX474 (R)2GABA160.7%0.1
INXXX267 (L)1GABA150.7%0.0
IN01A045 (L)2ACh150.7%0.7
INXXX269 (R)4ACh120.5%0.4
MNad61 (R)1unc110.5%0.0
AN09B042 (L)1ACh110.5%0.0
INXXX348 (R)1GABA100.4%0.0
MNad22 (R)1unc100.4%0.0
INXXX372 (R)2GABA100.4%0.8
INXXX209 (L)2unc100.4%0.6
INXXX181 (R)1ACh90.4%0.0
INXXX285 (R)1ACh80.4%0.0
INXXX452 (R)1GABA80.4%0.0
AN05B004 (R)1GABA80.4%0.0
AN19A018 (R)2ACh80.4%0.5
EN00B002 (M)1unc70.3%0.0
INXXX231 (L)2ACh70.3%0.4
INXXX209 (R)2unc70.3%0.4
INXXX326 (R)3unc70.3%0.5
MNad62 (R)1unc60.3%0.0
INXXX181 (L)1ACh60.3%0.0
IN19B078 (R)2ACh60.3%0.7
INXXX293 (L)2unc60.3%0.3
INXXX283 (R)2unc60.3%0.3
INXXX269 (L)3ACh60.3%0.4
EN00B013 (M)1unc50.2%0.0
IN07B061 (R)1Glu50.2%0.0
ANXXX084 (L)1ACh50.2%0.0
AN05B004 (L)1GABA50.2%0.0
INXXX149 (L)2ACh50.2%0.6
INXXX454 (R)2ACh50.2%0.6
EN00B004 (M)2unc50.2%0.6
INXXX446 (R)4ACh50.2%0.3
INXXX370 (L)1ACh40.2%0.0
INXXX267 (R)1GABA40.2%0.0
INXXX382_b (R)2GABA40.2%0.5
IN14A020 (L)2Glu40.2%0.5
INXXX265 (L)2ACh40.2%0.0
INXXX473 (R)1GABA30.1%0.0
INXXX317 (R)1Glu30.1%0.0
INXXX299 (R)1ACh30.1%0.0
INXXX446 (L)1ACh30.1%0.0
INXXX262 (R)1ACh30.1%0.0
EN00B012 (M)1unc30.1%0.0
IN01A048 (L)1ACh30.1%0.0
IN00A027 (M)1GABA30.1%0.0
INXXX285 (L)1ACh30.1%0.0
INXXX352 (L)1ACh30.1%0.0
INXXX084 (L)1ACh30.1%0.0
INXXX217 (L)1GABA30.1%0.0
ANXXX084 (R)1ACh30.1%0.0
IN02A059 (L)2Glu30.1%0.3
INXXX377 (R)1Glu20.1%0.0
INXXX122 (R)1ACh20.1%0.0
IN01A043 (L)1ACh20.1%0.0
INXXX293 (R)1unc20.1%0.0
INXXX431 (R)1ACh20.1%0.0
INXXX275 (R)1ACh20.1%0.0
INXXX386 (R)1Glu20.1%0.0
INXXX382_b (L)1GABA20.1%0.0
INXXX403 (R)1GABA20.1%0.0
INXXX300 (R)1GABA20.1%0.0
INXXX263 (L)1GABA20.1%0.0
MNad68 (R)1unc20.1%0.0
INXXX084 (R)1ACh20.1%0.0
INXXX032 (R)1ACh20.1%0.0
IN06A064 (R)1GABA20.1%0.0
IN19B078 (L)2ACh20.1%0.0
INXXX273 (L)2ACh20.1%0.0
EN00B010 (M)2unc20.1%0.0
IN10B010 (L)1ACh10.0%0.0
IN09A005 (R)1unc10.0%0.0
IN16B049 (L)1Glu10.0%0.0
INXXX271 (R)1Glu10.0%0.0
INXXX456 (R)1ACh10.0%0.0
SNxx171ACh10.0%0.0
IN01A065 (L)1ACh10.0%0.0
INXXX388 (L)1GABA10.0%0.0
INXXX282 (R)1GABA10.0%0.0
INXXX396 (L)1GABA10.0%0.0
INXXX290 (R)1unc10.0%0.0
EN00B003 (M)1unc10.0%0.0
INXXX228 (R)1ACh10.0%0.0
INXXX246 (R)1ACh10.0%0.0
INXXX273 (R)1ACh10.0%0.0
INXXX243 (R)1GABA10.0%0.0
INXXX246 (L)1ACh10.0%0.0
MNad64 (L)1GABA10.0%0.0
MNad61 (L)1unc10.0%0.0
ANXXX254 (R)1ACh10.0%0.0
ANXXX150 (L)1ACh10.0%0.0
AN00A006 (M)1GABA10.0%0.0