Male CNS – Cell Type Explorer

IN21A095(R)[T2]{21A}

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
350
Total Synapses
Post: 257 | Pre: 93
log ratio : -1.47
350
Mean Synapses
Post: 257 | Pre: 93
log ratio : -1.47
Glu(84.8% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (6 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
LegNp(T2)(R)14857.6%-0.967681.7%
LTct7529.2%-3.2388.6%
MesoLN(R)93.5%-1.1744.3%
IntTct135.1%-inf00.0%
mVAC(T2)(R)72.7%-0.4955.4%
HTct(UTct-T3)(R)51.9%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
IN21A095
%
In
CV
SNxx301ACh146.1%0.0
IN19A015 (R)1GABA146.1%0.0
IN23B018 (R)2ACh146.1%0.4
IN16B018 (R)1GABA125.3%0.0
IN17A061 (R)2ACh125.3%0.2
IN04B018 (L)2ACh114.8%0.1
IN21A011 (R)1Glu104.4%0.0
IN09A001 (R)1GABA73.1%0.0
DNpe032 (R)1ACh73.1%0.0
IN07B007 (L)1Glu73.1%0.0
IN13A010 (R)1GABA62.6%0.0
AN00A006 (M)2GABA62.6%0.0
IN21A018 (R)1ACh52.2%0.0
ANXXX023 (R)1ACh52.2%0.0
DNpe032 (L)1ACh52.2%0.0
IN08B087 (L)1ACh41.8%0.0
IN13A003 (R)1GABA41.8%0.0
DNp22 (R)1ACh41.8%0.0
IN03B020 (L)2GABA41.8%0.0
IN10B038 (L)1ACh31.3%0.0
IN20A.22A070,IN20A.22A080 (R)1ACh31.3%0.0
AN05B097 (L)1ACh31.3%0.0
IN14A085_a (L)1Glu20.9%0.0
IN13A044 (R)1GABA20.9%0.0
IN20A.22A039 (R)1ACh20.9%0.0
IN14A086 (L)1Glu20.9%0.0
IN13B090 (L)1GABA20.9%0.0
IN09A074 (R)1GABA20.9%0.0
IN09A043 (R)1GABA20.9%0.0
IN14A077 (L)1Glu20.9%0.0
IN09A012 (R)1GABA20.9%0.0
IN14A014 (L)1Glu20.9%0.0
IN02A026 (L)1Glu20.9%0.0
IN19A008 (R)1GABA20.9%0.0
DNp17 (R)1ACh20.9%0.0
ANXXX082 (L)1ACh20.9%0.0
IN04B018 (R)2ACh20.9%0.0
IN03B020 (R)2GABA20.9%0.0
IN13B032 (L)1GABA10.4%0.0
IN09A078 (R)1GABA10.4%0.0
IN13A034 (R)1GABA10.4%0.0
IN14A070 (L)1Glu10.4%0.0
IN19A021 (R)1GABA10.4%0.0
IN12B027 (L)1GABA10.4%0.0
IN20A.22A070 (R)1ACh10.4%0.0
IN03A060 (R)1ACh10.4%0.0
Sternotrochanter MN (R)1unc10.4%0.0
IN13A072 (R)1GABA10.4%0.0
IN13B064 (L)1GABA10.4%0.0
IN13B060 (L)1GABA10.4%0.0
IN12B088 (L)1GABA10.4%0.0
IN14A085_b (L)1Glu10.4%0.0
IN07B065 (R)1ACh10.4%0.0
IN13B087 (L)1GABA10.4%0.0
IN08B055 (R)1ACh10.4%0.0
IN12B029 (R)1GABA10.4%0.0
IN08B056 (L)1ACh10.4%0.0
IN12B024_c (L)1GABA10.4%0.0
IN03A033 (R)1ACh10.4%0.0
IN12B031 (L)1GABA10.4%0.0
IN01B017 (R)1GABA10.4%0.0
IN06B029 (L)1GABA10.4%0.0
IN12B012 (L)1GABA10.4%0.0
IN06B019 (R)1GABA10.4%0.0
IN18B011 (R)1ACh10.4%0.0
IN07B007 (R)1Glu10.4%0.0
IN07B002 (L)1ACh10.4%0.0
IN07B001 (L)1ACh10.4%0.0
DNge079 (R)1GABA10.4%0.0
AN07B025 (R)1ACh10.4%0.0
AN14A003 (L)1Glu10.4%0.0
DNg51 (L)1ACh10.4%0.0
DNg34 (R)1unc10.4%0.0
DNp73 (L)1ACh10.4%0.0

Outputs

downstream
partner
#NTconns
IN21A095
%
Out
CV
Sternotrochanter MN (R)2unc4135.3%0.5
IN19A008 (R)1GABA1311.2%0.0
Tr extensor MN (R)2unc119.5%0.8
MNml80 (R)1unc76.0%0.0
IN03B032 (R)1GABA76.0%0.0
IN20A.22A001 (R)1ACh43.4%0.0
IN04B012 (L)1ACh32.6%0.0
IN12B012 (L)1GABA32.6%0.0
AN02A001 (L)1Glu32.6%0.0
STTMm (R)2unc32.6%0.3
IN21A080 (R)1Glu21.7%0.0
IN14A077 (L)1Glu21.7%0.0
GFC2 (R)1ACh21.7%0.0
IN19A015 (R)1GABA21.7%0.0
IN21A078 (R)1Glu10.9%0.0
Fe reductor MN (R)1unc10.9%0.0
IN13A072 (R)1GABA10.9%0.0
IN12B045 (L)1GABA10.9%0.0
IN08B064 (R)1ACh10.9%0.0
Tergotr. MN (R)1unc10.9%0.0
IN21A042 (R)1Glu10.9%0.0
IN14B009 (R)1Glu10.9%0.0
IN13B008 (L)1GABA10.9%0.0
IN18B011 (L)1ACh10.9%0.0
IN18B009 (L)1ACh10.9%0.0
IN18B011 (R)1ACh10.9%0.0
IN07B007 (R)1Glu10.9%0.0