Male CNS – Cell Type Explorer

IN21A039(R)[T3]{21A}

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
533
Total Synapses
Post: 398 | Pre: 135
log ratio : -1.56
533
Mean Synapses
Post: 398 | Pre: 135
log ratio : -1.56
Glu(63.7% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (3 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
LegNp(T3)(R)39699.5%-1.5713398.5%
ANm20.5%-inf00.0%
MetaLN(R)00.0%inf21.5%

Connectivity

Inputs

upstream
partner
#NTconns
IN21A039
%
In
CV
IN13A002 (R)1GABA359.4%0.0
IN21A014 (R)1Glu277.3%0.0
AN19B001 (L)2ACh277.3%0.5
IN17A028 (R)2ACh143.8%0.4
AN18B001 (L)1ACh133.5%0.0
IN19A011 (R)1GABA102.7%0.0
SNppxx1ACh102.7%0.0
IN04B075 (R)1ACh102.7%0.0
DNp18 (R)1ACh102.7%0.0
IN12B003 (L)1GABA92.4%0.0
IN23B001 (L)1ACh82.2%0.0
IN19A005 (R)1GABA71.9%0.0
AN18B001 (R)1ACh71.9%0.0
IN04B044 (R)2ACh71.9%0.4
IN13B074 (L)1GABA61.6%0.0
IN09A049 (R)1GABA61.6%0.0
IN21A006 (R)1Glu61.6%0.0
DNg108 (L)1GABA61.6%0.0
IN21A023,IN21A024 (R)2Glu61.6%0.3
IN19B003 (L)1ACh51.3%0.0
IN17A001 (R)1ACh51.3%0.0
IN20A.22A039 (R)2ACh51.3%0.2
IN20A.22A007 (R)1ACh41.1%0.0
aSP22 (R)1ACh41.1%0.0
IN11A015, IN11A027 (R)2ACh41.1%0.5
IN13A030 (R)3GABA41.1%0.4
IN21A054 (R)3Glu41.1%0.4
IN01A066 (L)1ACh30.8%0.0
IN13A059 (R)1GABA30.8%0.0
INXXX466 (R)1ACh30.8%0.0
IN13B013 (L)1GABA30.8%0.0
IN13B009 (L)1GABA30.8%0.0
IN13B004 (L)1GABA30.8%0.0
IN13B005 (L)1GABA30.8%0.0
IN23B001 (R)1ACh30.8%0.0
DNg74_a (L)1GABA30.8%0.0
INXXX464 (R)1ACh20.5%0.0
IN01A012 (L)1ACh20.5%0.0
IN12B023 (L)1GABA20.5%0.0
INXXX053 (R)1GABA20.5%0.0
IN18B050 (L)1ACh20.5%0.0
IN04B048 (R)1ACh20.5%0.0
IN12B073 (L)1GABA20.5%0.0
IN09A042 (R)1GABA20.5%0.0
IN21A047_a (R)1Glu20.5%0.0
IN12B036 (L)1GABA20.5%0.0
IN13B018 (L)1GABA20.5%0.0
IN21A004 (R)1ACh20.5%0.0
IN08A006 (R)1GABA20.5%0.0
IN13A001 (R)1GABA20.5%0.0
IN14B005 (L)1Glu20.5%0.0
DNpe017 (R)1ACh20.5%0.0
DNa13 (R)1ACh20.5%0.0
DNd05 (R)1ACh20.5%0.0
AN18B053 (L)1ACh20.5%0.0
DNg79 (L)1ACh20.5%0.0
DNge063 (L)1GABA20.5%0.0
IN20A.22A060 (R)2ACh20.5%0.0
SNpp512ACh20.5%0.0
IN21A055 (R)1Glu10.3%0.0
IN13A069 (R)1GABA10.3%0.0
IN08A007 (R)1Glu10.3%0.0
IN20A.22A006 (R)1ACh10.3%0.0
IN07B001 (R)1ACh10.3%0.0
IN12B012 (L)1GABA10.3%0.0
IN09A090 (R)1GABA10.3%0.0
IN06B028 (R)1GABA10.3%0.0
IN20A.22A064 (R)1ACh10.3%0.0
Ti extensor MN (R)1unc10.3%0.0
IN16B108 (R)1Glu10.3%0.0
IN13A045 (R)1GABA10.3%0.0
IN21A037 (R)1Glu10.3%0.0
IN12B068_b (R)1GABA10.3%0.0
IN16B074 (R)1Glu10.3%0.0
IN04B063 (R)1ACh10.3%0.0
IN04B062 (R)1ACh10.3%0.0
IN01A026 (L)1ACh10.3%0.0
IN04B032 (R)1ACh10.3%0.0
IN01A026 (R)1ACh10.3%0.0
IN21A036 (R)1Glu10.3%0.0
GFC3 (R)1ACh10.3%0.0
IN16B029 (R)1Glu10.3%0.0
IN06B030 (L)1GABA10.3%0.0
IN01A016 (L)1ACh10.3%0.0
IN06B008 (R)1GABA10.3%0.0
IN21A016 (R)1Glu10.3%0.0
IN13A009 (R)1GABA10.3%0.0
INXXX025 (R)1ACh10.3%0.0
IN07B001 (L)1ACh10.3%0.0
IN13A003 (R)1GABA10.3%0.0
IN21A008 (R)1Glu10.3%0.0
IN26X001 (R)1GABA10.3%0.0
IN19A007 (R)1GABA10.3%0.0
IN06B035 (R)1GABA10.3%0.0
IN12A001 (R)1ACh10.3%0.0
DNp05 (L)1ACh10.3%0.0
AN19B001 (R)1ACh10.3%0.0
DNp18 (L)1ACh10.3%0.0

Outputs

downstream
partner
#NTconns
IN21A039
%
Out
CV
Ti extensor MN (R)2unc5920.8%0.8
Sternotrochanter MN (R)3unc4014.1%0.3
GFC3 (R)3ACh258.8%1.0
INXXX464 (R)1ACh155.3%0.0
IN17A001 (R)1ACh134.6%0.0
IN11A015, IN11A027 (R)1ACh113.9%0.0
IN21A002 (R)1Glu103.5%0.0
IN13A001 (R)1GABA93.2%0.0
IN20A.22A007 (R)2ACh62.1%0.3
IN16B029 (R)1Glu51.8%0.0
Pleural remotor/abductor MN (R)1unc51.8%0.0
Sternal anterior rotator MN (R)1unc51.8%0.0
IN13A045 (R)2GABA51.8%0.6
Tr extensor MN (R)1unc41.4%0.0
IN21A015 (R)1Glu41.4%0.0
IN08A002 (R)1Glu41.4%0.0
IN13A040 (R)2GABA41.4%0.5
IN09A003 (R)1GABA31.1%0.0
IN19A030 (R)1GABA31.1%0.0
IN14A004 (L)1Glu31.1%0.0
IN20A.22A060 (R)2ACh31.1%0.3
IN19A011 (R)1GABA20.7%0.0
IN08A007 (R)1Glu20.7%0.0
IN16B020 (R)1Glu20.7%0.0
IN03A004 (R)1ACh20.7%0.0
IN14A045 (L)1Glu20.7%0.0
IN04B075 (R)1ACh20.7%0.0
INXXX022 (L)1ACh20.7%0.0
IN21A003 (R)1Glu20.7%0.0
IN07B002 (L)1ACh20.7%0.0
AN19B001 (L)2ACh20.7%0.0
IN03A070 (R)1ACh10.4%0.0
Tr flexor MN (R)1unc10.4%0.0
IN01A082 (L)1ACh10.4%0.0
IN19A005 (R)1GABA10.4%0.0
IN13A030 (R)1GABA10.4%0.0
IN19A104 (R)1GABA10.4%0.0
IN04B043_a (R)1ACh10.4%0.0
IN04B110 (R)1ACh10.4%0.0
IN03A064 (R)1ACh10.4%0.0
IN21A037 (R)1Glu10.4%0.0
IN13B048 (L)1GABA10.4%0.0
IN08A019 (R)1Glu10.4%0.0
IN04B062 (R)1ACh10.4%0.0
IN19A016 (R)1GABA10.4%0.0
IN16B041 (R)1Glu10.4%0.0
IN17A028 (R)1ACh10.4%0.0
IN01A016 (L)1ACh10.4%0.0
IN18B013 (R)1ACh10.4%0.0
IN04B031 (R)1ACh10.4%0.0
IN21A014 (R)1Glu10.4%0.0
MNhl02 (R)1unc10.4%0.0
IN19B027 (R)1ACh10.4%0.0
IN19A014 (R)1ACh10.4%0.0
IN19B012 (L)1ACh10.4%0.0
IN09A006 (R)1GABA10.4%0.0
DNg14 (L)1ACh10.4%0.0
AN18B053 (L)1ACh10.4%0.0
AN19B009 (R)1ACh10.4%0.0