Male CNS – Cell Type Explorer

IN19B058(L)[T2]{19B}

4
Total Neurons
Right: 2 | Left: 2
log ratio : 0.00
1,612
Total Synapses
Post: 1,040 | Pre: 572
log ratio : -0.86
806
Mean Synapses
Post: 520 | Pre: 286
log ratio : -0.86
ACh(95.5% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (11 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
WTct(UTct-T2)(R)63060.6%-0.4047883.6%
WTct(UTct-T2)(L)20519.7%-4.6881.4%
Ov(R)918.8%-2.60152.6%
VNC-unspecified484.6%-0.73295.1%
IntTct403.8%-4.3220.3%
ANm60.6%2.00244.2%
HTct(UTct-T3)(R)20.2%3.00162.8%
LTct70.7%-inf00.0%
NTct(UTct-T1)(R)60.6%-inf00.0%
Ov(L)40.4%-inf00.0%
PDMN(R)10.1%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
IN19B058
%
In
CV
SNpp1610ACh51.510.4%1.5
SNxx242unc438.7%0.8
IN19B103 (L)4ACh32.56.6%0.8
SApp1012ACh23.54.7%0.8
IN03B075 (R)2GABA22.54.5%0.1
IN12B016 (L)1GABA21.54.3%0.0
IN03B075 (L)2GABA193.8%0.1
IN12B016 (R)1GABA13.52.7%0.0
IN03B091 (R)6GABA122.4%0.5
IN02A007 (R)1Glu10.52.1%0.0
IN19B031 (R)1ACh102.0%0.0
IN19B031 (L)1ACh9.51.9%0.0
IN03B085 (R)2GABA8.51.7%0.4
IN02A007 (L)1Glu81.6%0.0
IN11B015 (R)2GABA7.51.5%0.3
AN13B002 (L)1GABA6.51.3%0.0
INXXX119 (R)1GABA6.51.3%0.0
DNpe031 (R)2Glu61.2%0.5
INXXX119 (L)1GABA5.51.1%0.0
AN06B031 (L)1GABA51.0%0.0
IN11B015 (L)2GABA51.0%0.0
SNta071ACh40.8%0.0
IN11B013 (R)2GABA40.8%0.2
SNta11,SNta145ACh40.8%0.3
IN19B037 (R)1ACh3.50.7%0.0
DNge150 (M)1unc3.50.7%0.0
SNta04,SNta116ACh3.50.7%0.3
IN01A024 (L)1ACh30.6%0.0
IN23B066 (R)1ACh30.6%0.0
DNpe031 (L)1Glu30.6%0.0
IN06B066 (L)4GABA30.6%0.3
IN13A022 (R)1GABA2.50.5%0.0
IN03B085 (L)1GABA2.50.5%0.0
IN19B083 (L)1ACh2.50.5%0.0
IN03B054 (R)2GABA2.50.5%0.6
SNta042ACh2.50.5%0.2
IN03B091 (L)2GABA2.50.5%0.2
IN03B089 (L)4GABA2.50.5%0.3
IN19B069 (L)1ACh20.4%0.0
IN05B016 (R)1GABA20.4%0.0
INXXX044 (R)1GABA20.4%0.0
ANXXX093 (L)1ACh20.4%0.0
IN19B041 (R)1ACh20.4%0.0
IN19B041 (L)1ACh20.4%0.0
IN17A060 (R)2Glu20.4%0.5
AN05B096 (R)1ACh20.4%0.0
IN19B103 (R)2ACh20.4%0.5
IN19B090 (L)3ACh20.4%0.4
IN03B078 (R)2GABA20.4%0.0
SNxx283ACh20.4%0.4
IN03B089 (R)4GABA20.4%0.0
SNpp121ACh1.50.3%0.0
IN19B072 (L)1ACh1.50.3%0.0
IN03B054 (L)1GABA1.50.3%0.0
IN12A052_b (R)1ACh1.50.3%0.0
IN12A055 (L)1ACh1.50.3%0.0
IN19B083 (R)1ACh1.50.3%0.0
DNpe037 (R)1ACh1.50.3%0.0
DNge135 (L)1GABA1.50.3%0.0
DNpe055 (R)1ACh1.50.3%0.0
DNg27 (L)1Glu1.50.3%0.0
IN19B058 (L)2ACh1.50.3%0.3
IN19B040 (L)2ACh1.50.3%0.3
IN19B062 (L)1ACh1.50.3%0.0
IN06B066 (R)2GABA1.50.3%0.3
IN13A022 (L)2GABA1.50.3%0.3
AN05B004 (L)1GABA1.50.3%0.0
IN12A012 (R)1GABA10.2%0.0
IN17A067 (R)1ACh10.2%0.0
IN19A056 (R)1GABA10.2%0.0
IN06B001 (L)1GABA10.2%0.0
DNde001 (R)1Glu10.2%0.0
IN17A082, IN17A086 (R)1ACh10.2%0.0
IN17A100 (R)1ACh10.2%0.0
IN19B088 (R)1ACh10.2%0.0
SNpp131ACh10.2%0.0
IN00A043 (M)1GABA10.2%0.0
SNta021ACh10.2%0.0
IN18B026 (R)1ACh10.2%0.0
AN06A030 (R)1Glu10.2%0.0
DNa08 (L)1ACh10.2%0.0
DNp48 (R)1ACh10.2%0.0
SNpp282ACh10.2%0.0
IN10B023 (L)2ACh10.2%0.0
IN19B066 (L)1ACh10.2%0.0
SNpp322ACh10.2%0.0
IN27X007 (L)1unc10.2%0.0
AN27X009 (L)1ACh10.2%0.0
IN07B048 (L)2ACh10.2%0.0
IN08A040 (L)2Glu10.2%0.0
IN11A006 (R)2ACh10.2%0.0
IN03B056 (R)1GABA0.50.1%0.0
IN19B067 (R)1ACh0.50.1%0.0
IN00A047 (M)1GABA0.50.1%0.0
IN11A022 (R)1ACh0.50.1%0.0
IN05B016 (L)1GABA0.50.1%0.0
SNpp2315-HT0.50.1%0.0
SNta181ACh0.50.1%0.0
IN06B079 (L)1GABA0.50.1%0.0
SNta02,SNta091ACh0.50.1%0.0
IN06B071 (L)1GABA0.50.1%0.0
IN19B057 (R)1ACh0.50.1%0.0
IN17A056 (R)1ACh0.50.1%0.0
ps2 MN (L)1unc0.50.1%0.0
SNta051ACh0.50.1%0.0
IN01A029 (L)1ACh0.50.1%0.0
SNpp311ACh0.50.1%0.0
SNxx251ACh0.50.1%0.0
IN19B020 (R)1ACh0.50.1%0.0
SNpp301ACh0.50.1%0.0
IN23B005 (R)1ACh0.50.1%0.0
DNae009 (L)1ACh0.50.1%0.0
AN05B009 (L)1GABA0.50.1%0.0
AN05B040 (L)1GABA0.50.1%0.0
ANXXX170 (L)1ACh0.50.1%0.0
AN09B021 (R)1Glu0.50.1%0.0
AN05B021 (L)1GABA0.50.1%0.0
AN17A004 (R)1ACh0.50.1%0.0
AN05B029 (L)1GABA0.50.1%0.0
DNd03 (R)1Glu0.50.1%0.0
DNg80 (R)1Glu0.50.1%0.0
IN19B070 (R)1ACh0.50.1%0.0
IN27X003 (R)1unc0.50.1%0.0
IN03B084 (R)1GABA0.50.1%0.0
IN19B092 (R)1ACh0.50.1%0.0
INXXX133 (R)1ACh0.50.1%0.0
IN00A022 (M)1GABA0.50.1%0.0
IN07B079 (L)1ACh0.50.1%0.0
IN06A072 (L)1GABA0.50.1%0.0
IN19B080 (R)1ACh0.50.1%0.0
IN08A040 (R)1Glu0.50.1%0.0
IN17A119 (R)1ACh0.50.1%0.0
IN19B064 (L)1ACh0.50.1%0.0
IN06A093 (L)1GABA0.50.1%0.0
IN02A040 (R)1Glu0.50.1%0.0
IN02A042 (L)1Glu0.50.1%0.0
SNxx261ACh0.50.1%0.0
IN11B025 (R)1GABA0.50.1%0.0
IN00A057 (M)1GABA0.50.1%0.0
SNpp071ACh0.50.1%0.0
IN17A116 (L)1ACh0.50.1%0.0
IN17A097 (L)1ACh0.50.1%0.0
IN19B058 (R)1ACh0.50.1%0.0
IN17A077 (R)1ACh0.50.1%0.0
IN19B084 (L)1ACh0.50.1%0.0
IN19B057 (L)1ACh0.50.1%0.0
IN17A056 (L)1ACh0.50.1%0.0
IN19B075 (L)1ACh0.50.1%0.0
IN19A056 (L)1GABA0.50.1%0.0
IN03B078 (L)1GABA0.50.1%0.0
IN03B053 (R)1GABA0.50.1%0.0
IN08A011 (L)1Glu0.50.1%0.0
IN03B072 (L)1GABA0.50.1%0.0
IN06B059 (R)1GABA0.50.1%0.0
DVMn 3a, b (L)1unc0.50.1%0.0
IN17A085 (R)1ACh0.50.1%0.0
SNpp051ACh0.50.1%0.0
IN03B038 (R)1GABA0.50.1%0.0
IN00A008 (M)1GABA0.50.1%0.0
INXXX133 (L)1ACh0.50.1%0.0
INXXX173 (L)1ACh0.50.1%0.0
IN19B020 (L)1ACh0.50.1%0.0
IN03B058 (R)1GABA0.50.1%0.0
IN10B023 (R)1ACh0.50.1%0.0
IN27X007 (R)1unc0.50.1%0.0
AN19B001 (L)1ACh0.50.1%0.0
DNpe037 (L)1ACh0.50.1%0.0
vMS16 (R)1unc0.50.1%0.0
AN05B096 (L)1ACh0.50.1%0.0
SApp19,SApp211ACh0.50.1%0.0
AN17A004 (L)1ACh0.50.1%0.0
DNg110 (R)1ACh0.50.1%0.0
AN19B024 (L)1ACh0.50.1%0.0
DNp36 (L)1Glu0.50.1%0.0

Outputs

downstream
partner
#NTconns
IN19B058
%
Out
CV
EN00B011 (M)2unc82.512.1%0.0
ps2 MN (R)1unc7310.7%0.0
DVMn 1a-c (R)3unc55.58.1%0.1
tp2 MN (R)1unc426.1%0.0
IN03B046 (R)2GABA405.9%0.0
IN06B013 (L)1GABA38.55.6%0.0
ps2 MN (L)1unc36.55.3%0.0
IN03B058 (R)5GABA35.55.2%0.8
IN06A025 (R)1GABA17.52.6%0.0
IN03B053 (R)2GABA16.52.4%0.3
MNad28 (R)1unc111.6%0.0
DVMn 3a, b (R)2unc91.3%0.2
IN03B071 (R)5GABA91.3%0.5
IN00A022 (M)3GABA8.51.2%0.4
IN10B023 (L)1ACh7.51.1%0.0
hg3 MN (R)1GABA7.51.1%0.0
IN03B058 (L)4GABA7.51.1%0.6
IN06B085 (L)4GABA7.51.1%0.5
hg3 MN (L)1GABA71.0%0.0
tp2 MN (L)1unc71.0%0.0
IN03B043 (R)2GABA71.0%0.1
IN17A067 (R)1ACh6.51.0%0.0
hi1 MN (R)1unc5.50.8%0.0
IN17A057 (R)1ACh4.50.7%0.0
IN12B016 (R)1GABA4.50.7%0.0
IN19B090 (L)4ACh4.50.7%0.2
IN06B069 (L)1GABA40.6%0.0
IN03B085 (R)2GABA40.6%0.8
hi1 MN (L)1unc40.6%0.0
IN03B089 (R)3GABA40.6%0.4
DVMn 1a-c (L)2unc40.6%0.2
IN17A056 (R)1ACh3.50.5%0.0
MNwm35 (R)1unc3.50.5%0.0
IN00A032 (M)2GABA3.50.5%0.1
IN19B103 (L)3ACh3.50.5%0.2
MNad28 (L)1unc30.4%0.0
hg4 MN (R)1unc30.4%0.0
IN06B013 (R)1GABA30.4%0.0
IN17A075 (R)1ACh30.4%0.0
ANXXX033 (R)1ACh30.4%0.0
IN06B066 (L)4GABA30.4%0.6
IN03B074 (R)2GABA30.4%0.0
IN12A052_b (R)2ACh30.4%0.3
AN05B096 (R)1ACh2.50.4%0.0
INXXX315 (R)1ACh2.50.4%0.0
DVMn 2a, b (R)1unc2.50.4%0.0
IN08A040 (L)1Glu20.3%0.0
IN19B058 (R)1ACh20.3%0.0
IN03B049 (R)1GABA20.3%0.0
IN03B071 (L)2GABA20.3%0.5
IN19B070 (R)2ACh20.3%0.0
IN19B057 (R)2ACh20.3%0.0
IN03B091 (R)2GABA20.3%0.0
IN06B085 (R)3GABA20.3%0.4
IN17B001 (R)1GABA1.50.2%0.0
IN18B026 (L)1ACh1.50.2%0.0
IN00A001 (M)1unc1.50.2%0.0
EAXXX079 (L)1unc1.50.2%0.0
AN05B004 (R)1GABA1.50.2%0.0
hi2 MN (R)2unc1.50.2%0.3
IN19B077 (L)2ACh1.50.2%0.3
IN19B041 (L)1ACh1.50.2%0.0
IN19B058 (L)2ACh1.50.2%0.3
IN19B031 (L)1ACh1.50.2%0.0
IN17A080,IN17A083 (R)3ACh1.50.2%0.0
IN11A048 (L)1ACh10.1%0.0
IN19B086 (R)1ACh10.1%0.0
IN19A043 (L)1GABA10.1%0.0
IN03B075 (R)1GABA10.1%0.0
IN19B075 (L)1ACh10.1%0.0
IN19B041 (R)1ACh10.1%0.0
SNpp161ACh10.1%0.0
mesVUM-MJ (M)1unc10.1%0.0
SNpp051ACh10.1%0.0
IN11A048 (R)1ACh10.1%0.0
IN19B066 (L)2ACh10.1%0.0
IN19B084 (L)1ACh10.1%0.0
IN03B056 (R)2GABA10.1%0.0
IN19B067 (R)2ACh10.1%0.0
IN08A011 (R)2Glu10.1%0.0
IN19B075 (R)2ACh10.1%0.0
INXXX045 (L)1unc0.50.1%0.0
SNta071ACh0.50.1%0.0
SNxx251ACh0.50.1%0.0
IN17A113,IN17A119 (R)1ACh0.50.1%0.0
IN19B064 (L)1ACh0.50.1%0.0
IN17A113 (R)1ACh0.50.1%0.0
IN19B062 (L)1ACh0.50.1%0.0
IN19B084 (R)1ACh0.50.1%0.0
IN19B072 (L)1ACh0.50.1%0.0
IN06A039 (R)1GABA0.50.1%0.0
IN12A002 (R)1ACh0.50.1%0.0
IN17A060 (R)1Glu0.50.1%0.0
IN08A040 (R)1Glu0.50.1%0.0
IN27X003 (R)1unc0.50.1%0.0
IN00A057 (M)1GABA0.50.1%0.0
IN19B077 (R)1ACh0.50.1%0.0
IN11B013 (R)1GABA0.50.1%0.0
IN19B043 (R)1ACh0.50.1%0.0
IN00A047 (M)1GABA0.50.1%0.0
IN03B054 (R)1GABA0.50.1%0.0
IN17A104 (R)1ACh0.50.1%0.0
IN19B103 (R)1ACh0.50.1%0.0
EN27X010 (R)1unc0.50.1%0.0
SNpp2315-HT0.50.1%0.0
IN17A084 (R)1ACh0.50.1%0.0
IN06B083 (L)1GABA0.50.1%0.0
IN27X003 (L)1unc0.50.1%0.0
IN17A059,IN17A063 (R)1ACh0.50.1%0.0
IN11A004 (R)1ACh0.50.1%0.0
IN02A024 (R)1Glu0.50.1%0.0
IN03B024 (R)1GABA0.50.1%0.0
EN00B001 (M)1unc0.50.1%0.0
IN12B011 (L)1GABA0.50.1%0.0
AN27X009 (R)1ACh0.50.1%0.0
EAXXX079 (R)1unc0.50.1%0.0
DNge150 (M)1unc0.50.1%0.0