Male CNS – Cell Type Explorer

IN19A098(L)[T1]{19A}

14
Total Neurons
Right: 10 | Left: 4
log ratio : -1.32
860
Total Synapses
Post: 622 | Pre: 238
log ratio : -1.39
215
Mean Synapses
Post: 155.5 | Pre: 59.5
log ratio : -1.39
GABA(78.5% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (4 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
LegNp(T1)(L)38862.4%-1.3615163.4%
LegNp(T1)(R)22035.4%-1.398435.3%
VNC-unspecified121.9%-2.5820.8%
VProN(L)20.3%-1.0010.4%

Connectivity

Inputs

upstream
partner
#NTconns
IN19A098
%
In
CV
IN12B020 (R)3GABA5.55.2%0.3
IN09A006 (L)2GABA4.84.5%0.6
SNpp514ACh4.54.2%0.8
DNge098 (L)1GABA4.24.0%0.0
DNge098 (R)1GABA43.8%0.0
IN16B055 (L)3Glu43.8%0.6
AN04B004 (L)2ACh2.52.4%0.8
IN16B060 (L)2Glu2.52.4%0.0
IN12B020 (L)3GABA2.22.1%0.5
AN12B060 (R)4GABA21.9%0.6
IN10B004 (R)1ACh1.81.6%0.0
IN03A065 (L)3ACh1.81.6%0.4
SNppxx4ACh1.81.6%0.5
AN12B011 (R)1GABA1.51.4%0.0
DNge060 (L)1Glu1.51.4%0.0
SNpp524ACh1.51.4%0.6
AN12B060 (L)5GABA1.51.4%0.3
IN10B003 (R)1ACh1.21.2%0.0
SNpp451ACh1.21.2%0.0
IN16B050 (R)1Glu1.21.2%0.0
IN14B011 (R)3Glu1.21.2%0.6
IN20A.22A008 (L)2ACh1.21.2%0.2
IN16B055 (R)2Glu1.21.2%0.2
IN12B060 (R)1GABA10.9%0.0
DNge019 (L)1ACh10.9%0.0
DNge048 (R)1ACh10.9%0.0
IN13B015 (L)1GABA10.9%0.0
IN19A103 (R)2GABA10.9%0.5
IN09A006 (R)1GABA10.9%0.0
AN09A007 (R)1GABA10.9%0.0
DNge060 (R)1Glu10.9%0.0
SNpp393ACh10.9%0.4
IN16B080 (L)2Glu10.9%0.0
IN13B015 (R)1GABA0.80.7%0.0
IN09A009 (L)1GABA0.80.7%0.0
IN09A068 (L)1GABA0.80.7%0.0
IN04B086 (L)1ACh0.80.7%0.0
IN16B060 (R)1Glu0.80.7%0.0
IN06B033 (L)1GABA0.80.7%0.0
INXXX029 (R)1ACh0.80.7%0.0
IN23B037 (R)1ACh0.80.7%0.0
DNg101 (R)1ACh0.80.7%0.0
IN16B114 (L)1Glu0.80.7%0.0
ANXXX002 (R)1GABA0.80.7%0.0
IN12B060 (L)1GABA0.80.7%0.0
IN04B078 (L)1ACh0.80.7%0.0
IN19A103 (L)1GABA0.80.7%0.0
IN16B038 (R)1Glu0.80.7%0.0
ANXXX008 (R)1unc0.80.7%0.0
IN26X001 (R)1GABA0.80.7%0.0
IN19A098 (R)3GABA0.80.7%0.0
IN09A069 (L)1GABA0.50.5%0.0
IN08A005 (L)1Glu0.50.5%0.0
IN16B038 (L)1Glu0.50.5%0.0
INXXX194 (L)1Glu0.50.5%0.0
IN09A080, IN09A085 (L)1GABA0.50.5%0.0
DNg101 (L)1ACh0.50.5%0.0
IN14A033 (L)1Glu0.50.5%0.0
IN16B032 (L)1Glu0.50.5%0.0
IN13B005 (R)1GABA0.50.5%0.0
DNge076 (R)1GABA0.50.5%0.0
IN13A058 (L)1GABA0.50.5%0.0
IN13A058 (R)1GABA0.50.5%0.0
IN16B032 (R)1Glu0.50.5%0.0
IN04B034 (L)1ACh0.50.5%0.0
INXXX045 (L)1unc0.50.5%0.0
AN12B055 (L)1GABA0.50.5%0.0
DNge019 (R)1ACh0.50.5%0.0
IN03A094 (L)1ACh0.50.5%0.0
IN19A098 (L)2GABA0.50.5%0.0
IN03A065 (R)1ACh0.50.5%0.0
IN04B008 (L)1ACh0.50.5%0.0
IN04B008 (R)1ACh0.50.5%0.0
IN17A016 (L)1ACh0.50.5%0.0
IN03A066 (R)2ACh0.50.5%0.0
IN23B072 (L)1ACh0.20.2%0.0
IN13A035 (L)1GABA0.20.2%0.0
IN20A.22A012 (L)1ACh0.20.2%0.0
IN13A071 (R)1GABA0.20.2%0.0
IN12B044_e (L)1GABA0.20.2%0.0
IN03A085 (L)1ACh0.20.2%0.0
IN16B075 (L)1Glu0.20.2%0.0
IN04B009 (L)1ACh0.20.2%0.0
IN04B026 (L)1ACh0.20.2%0.0
IN08B060 (R)1ACh0.20.2%0.0
IN16B030 (L)1Glu0.20.2%0.0
IN21A020 (L)1ACh0.20.2%0.0
IN21A011 (L)1Glu0.20.2%0.0
IN17A020 (R)1ACh0.20.2%0.0
IN03A010 (L)1ACh0.20.2%0.0
INXXX089 (R)1ACh0.20.2%0.0
AN19B015 (R)1ACh0.20.2%0.0
DNg74_a (R)1GABA0.20.2%0.0
IN23B013 (R)1ACh0.20.2%0.0
IN13A006 (L)1GABA0.20.2%0.0
IN03A006 (R)1ACh0.20.2%0.0
IN19A121 (L)1GABA0.20.2%0.0
IN16B050 (L)1Glu0.20.2%0.0
IN03A019 (R)1ACh0.20.2%0.0
IN21A011 (R)1Glu0.20.2%0.0
IN08A007 (R)1Glu0.20.2%0.0
ANXXX131 (R)1ACh0.20.2%0.0
IN14A037 (L)1Glu0.20.2%0.0
IN08A007 (L)1Glu0.20.2%0.0
IN08A026 (L)1Glu0.20.2%0.0
IN04B111 (R)1ACh0.20.2%0.0
IN17A016 (R)1ACh0.20.2%0.0
IN13A060 (L)1GABA0.20.2%0.0
IN14A026 (L)1Glu0.20.2%0.0
IN13A038 (L)1GABA0.20.2%0.0
IN20A.22A018 (R)1ACh0.20.2%0.0
IN08A030 (R)1Glu0.20.2%0.0
IN13A006 (R)1GABA0.20.2%0.0
IN09A068 (R)1GABA0.20.2%0.0
IN09A080, IN09A085 (R)1GABA0.20.2%0.0
IN13A059 (R)1GABA0.20.2%0.0
IN09A009 (R)1GABA0.20.2%0.0
IN16B058 (L)1Glu0.20.2%0.0
IN01A041 (L)1ACh0.20.2%0.0
IN08A034 (L)1Glu0.20.2%0.0
IN03A066 (L)1ACh0.20.2%0.0
IN03A022 (R)1ACh0.20.2%0.0
IN14A026 (R)1Glu0.20.2%0.0
IN26X002 (L)1GABA0.20.2%0.0
IN16B022 (R)1Glu0.20.2%0.0
IN03B042 (R)1GABA0.20.2%0.0
IN13B004 (L)1GABA0.20.2%0.0
IN19A003 (R)1GABA0.20.2%0.0
INXXX045 (R)1unc0.20.2%0.0
IN09A004 (R)1GABA0.20.2%0.0
AN01A014 (R)1ACh0.20.2%0.0
AN17A015 (R)1ACh0.20.2%0.0
DNge024 (R)1ACh0.20.2%0.0
AN09A007 (L)1GABA0.20.2%0.0
DNge076 (L)1GABA0.20.2%0.0
IN21A006 (L)1Glu0.20.2%0.0
IN14A048, IN14A102 (R)1Glu0.20.2%0.0
IN20A.22A013 (R)1ACh0.20.2%0.0

Outputs

downstream
partner
#NTconns
IN19A098
%
Out
CV
SNpp514ACh10.240.2%0.5
SNpp525ACh4.818.6%0.5
SNppxx3ACh3.814.7%0.4
IN13A006 (L)1GABA13.9%0.0
SNpp391ACh0.82.9%0.0
ANXXX218 (R)1ACh0.52.0%0.0
IN19A098 (L)2GABA0.52.0%0.0
IN19A098 (R)1GABA0.21.0%0.0
IN13B013 (R)1GABA0.21.0%0.0
IN14A021 (L)1Glu0.21.0%0.0
IN16B055 (L)1Glu0.21.0%0.0
IN08A026 (L)1Glu0.21.0%0.0
IN14A021 (R)1Glu0.21.0%0.0
AN17A003 (L)1ACh0.21.0%0.0
IN01A074 (R)1ACh0.21.0%0.0
IN13B005 (R)1GABA0.21.0%0.0
AN07B013 (L)1Glu0.21.0%0.0
IN19A121 (L)1GABA0.21.0%0.0
IN19A103 (L)1GABA0.21.0%0.0
IN13A041 (L)1GABA0.21.0%0.0
IN16B034 (R)1Glu0.21.0%0.0
IN21A009 (R)1Glu0.21.0%0.0
INXXX036 (L)1ACh0.21.0%0.0