Male CNS – Cell Type Explorer

IN17A113,IN17A119(R)[T2]{17A}

5
Total Neurons
Right: 2 | Left: 3
log ratio : 0.58
1,169
Total Synapses
Post: 730 | Pre: 439
log ratio : -0.73
584.5
Mean Synapses
Post: 365 | Pre: 219.5
log ratio : -0.73
ACh(95.9% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (7 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
WTct(UTct-T2)(R)43659.7%-0.6328264.2%
WTct(UTct-T2)(L)19526.7%-0.7211826.9%
Ov(R)658.9%-6.0210.2%
IntTct10.1%5.09347.7%
VNC-unspecified263.6%-3.1230.7%
LTct40.5%-2.0010.2%
LegNp(T2)(R)30.4%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
IN17A113,IN17A119
%
In
CV
IN11B015 (R)4GABA107.530.6%0.8
IN11B015 (L)3GABA4713.4%0.7
SNpp167ACh20.55.8%0.5
IN06A005 (L)1GABA10.53.0%0.0
IN17B004 (R)2GABA82.3%0.5
IN03B054 (L)2GABA82.3%0.4
IN10B006 (L)1ACh7.52.1%0.0
IN08B085_a (R)3ACh72.0%0.2
INXXX038 (R)1ACh51.4%0.0
IN02A004 (R)1Glu4.51.3%0.0
AN17B005 (R)1GABA41.1%0.0
IN19B082 (L)2ACh41.1%0.2
IN03B054 (R)1GABA3.51.0%0.0
AN09B009 (L)1ACh3.51.0%0.0
SNpp323ACh3.51.0%0.5
DNp13 (L)1ACh30.9%0.0
IN03A034 (R)1ACh30.9%0.0
IN08B085_a (L)3ACh30.9%0.7
SNxx242unc30.9%0.3
IN03B043 (R)2GABA30.9%0.0
IN05B030 (L)1GABA30.9%0.0
IN12B002 (L)1GABA2.50.7%0.0
IN17B001 (L)1GABA2.50.7%0.0
pMP2 (L)1ACh2.50.7%0.0
IN17A119 (R)1ACh20.6%0.0
IN00A050 (M)1GABA20.6%0.0
DNg45 (L)1ACh20.6%0.0
IN17A116 (R)1ACh20.6%0.0
AN17A004 (R)1ACh20.6%0.0
IN03B085 (L)1GABA20.6%0.0
IN11A004 (L)2ACh20.6%0.5
DNge083 (R)1Glu20.6%0.0
IN17A113,IN17A119 (L)3ACh20.6%0.4
IN03B085 (R)2GABA20.6%0.5
AN27X019 (L)1unc1.50.4%0.0
IN17A042 (R)1ACh1.50.4%0.0
IN17A023 (R)1ACh1.50.4%0.0
AN09B023 (L)1ACh1.50.4%0.0
AN02A001 (R)1Glu1.50.4%0.0
IN06B070 (R)1GABA1.50.4%0.0
IN06A005 (R)1GABA1.50.4%0.0
IN12A005 (R)1ACh1.50.4%0.0
DNa08 (L)1ACh1.50.4%0.0
IN08A011 (R)2Glu1.50.4%0.3
SNta182ACh1.50.4%0.3
IN06B070 (L)2GABA1.50.4%0.3
IN18B034 (L)1ACh1.50.4%0.0
IN03A044 (R)1ACh10.3%0.0
IN17A106_a (R)1ACh10.3%0.0
IN18B042 (L)1ACh10.3%0.0
IN19B090 (L)1ACh10.3%0.0
SNpp331ACh10.3%0.0
DNp68 (L)1ACh10.3%0.0
DNg30 (L)15-HT10.3%0.0
IN12B016 (R)1GABA10.3%0.0
IN03B089 (R)1GABA10.3%0.0
IN11A020 (R)1ACh10.3%0.0
IN12A010 (R)1ACh10.3%0.0
IN17A029 (L)1ACh10.3%0.0
DNp60 (L)1ACh10.3%0.0
DNd03 (R)1Glu10.3%0.0
DNp34 (L)1ACh10.3%0.0
IN11B013 (R)2GABA10.3%0.0
IN12A052_b (L)2ACh10.3%0.0
IN18B042 (R)1ACh10.3%0.0
IN17B001 (R)1GABA10.3%0.0
IN27X007 (R)1unc10.3%0.0
IN06B079 (L)1GABA0.50.1%0.0
IN06A039 (L)1GABA0.50.1%0.0
INXXX095 (L)1ACh0.50.1%0.0
IN03B089 (L)1GABA0.50.1%0.0
IN17A113 (R)1ACh0.50.1%0.0
IN06B059 (L)1GABA0.50.1%0.0
SNpp131ACh0.50.1%0.0
IN11B014 (L)1GABA0.50.1%0.0
IN17A099 (R)1ACh0.50.1%0.0
IN11A004 (R)1ACh0.50.1%0.0
IN19B095 (R)1ACh0.50.1%0.0
IN13B104 (L)1GABA0.50.1%0.0
IN19B094 (R)1ACh0.50.1%0.0
IN12B016 (L)1GABA0.50.1%0.0
IN00A017 (M)1unc0.50.1%0.0
IN18B032 (R)1ACh0.50.1%0.0
IN08B017 (R)1ACh0.50.1%0.0
IN12A006 (R)1ACh0.50.1%0.0
IN19B007 (R)1ACh0.50.1%0.0
IN17B006 (R)1GABA0.50.1%0.0
IN05B008 (L)1GABA0.50.1%0.0
dPR1 (L)1ACh0.50.1%0.0
IN11A001 (R)1GABA0.50.1%0.0
AN08B005 (R)1ACh0.50.1%0.0
SApp101ACh0.50.1%0.0
AN19B017 (L)1ACh0.50.1%0.0
IN13A022 (R)1GABA0.50.1%0.0
IN00A047 (M)1GABA0.50.1%0.0
vMS11 (R)1Glu0.50.1%0.0
IN17A114 (R)1ACh0.50.1%0.0
SNpp381ACh0.50.1%0.0
IN12A052_b (R)1ACh0.50.1%0.0
IN03A029 (R)1ACh0.50.1%0.0
IN19B056 (L)1ACh0.50.1%0.0
IN08A011 (L)1Glu0.50.1%0.0
IN19B058 (L)1ACh0.50.1%0.0
IN05B051 (L)1GABA0.50.1%0.0
IN06B013 (L)1GABA0.50.1%0.0
IN01A031 (L)1ACh0.50.1%0.0
IN10B023 (L)1ACh0.50.1%0.0
dPR1 (R)1ACh0.50.1%0.0
DNp27 (L)1ACh0.50.1%0.0
INXXX063 (L)1GABA0.50.1%0.0
DNge140 (L)1ACh0.50.1%0.0
DNpe056 (R)1ACh0.50.1%0.0

Outputs

downstream
partner
#NTconns
IN17A113,IN17A119
%
Out
CV
EN00B011 (M)2unc83.514.5%0.0
tp2 MN (R)1unc498.5%0.0
ps2 MN (R)1unc457.8%0.0
tp2 MN (L)1unc447.6%0.0
IN06B069 (L)4GABA386.6%0.7
ps2 MN (L)1unc356.1%0.0
DVMn 1a-c (R)3unc28.54.9%0.2
IN06B069 (R)5GABA26.54.6%1.1
IN27X007 (R)1unc20.53.6%0.0
IN06B066 (L)4GABA18.53.2%0.6
DVMn 1a-c (L)3unc122.1%0.6
IN06B059 (L)3GABA9.51.6%0.2
IN03B043 (R)2GABA91.6%0.2
DVMn 3a, b (R)2unc8.51.5%0.1
mesVUM-MJ (M)1unc7.51.3%0.0
vMS12_c (R)1ACh7.51.3%0.0
IN27X007 (L)1unc71.2%0.0
IN06B059 (R)4GABA71.2%0.9
hg3 MN (R)1GABA6.51.1%0.0
IN12A052_b (R)3ACh61.0%0.7
MNwm36 (R)1unc5.51.0%0.0
IN03B046 (R)2GABA5.51.0%0.3
IN03B046 (L)2GABA50.9%0.8
IN11B015 (R)3GABA50.9%0.5
hg3 MN (L)1GABA4.50.8%0.0
IN06B077 (L)2GABA4.50.8%0.8
MNwm35 (R)1unc40.7%0.0
MNwm35 (L)1unc40.7%0.0
IN00A032 (M)2GABA40.7%0.2
vMS12_c (L)1ACh3.50.6%0.0
DVMn 3a, b (L)1unc3.50.6%0.0
IN06B066 (R)2GABA30.5%0.7
IN17A042 (L)1ACh30.5%0.0
hg4 MN (L)1unc2.50.4%0.0
IN12A052_b (L)2ACh2.50.4%0.6
IN17A113,IN17A119 (L)2ACh2.50.4%0.6
IN06B085 (R)3GABA2.50.4%0.3
hg4 MN (R)1unc20.3%0.0
AN10B015 (L)1ACh20.3%0.0
DNp08 (R)1Glu20.3%0.0
MNwm36 (L)1unc20.3%0.0
IN11B015 (L)2GABA20.3%0.5
IN06B079 (L)1GABA1.50.3%0.0
IN12A052_a (R)1ACh1.50.3%0.0
AN27X009 (R)1ACh1.50.3%0.0
IN17A057 (R)1ACh1.50.3%0.0
AN27X019 (L)1unc1.50.3%0.0
IN19B077 (L)1ACh1.50.3%0.0
vMS12_d (R)2ACh1.50.3%0.3
IN17A101 (R)1ACh10.2%0.0
IN06B080 (R)1GABA10.2%0.0
IN19B084 (L)1ACh10.2%0.0
IN17A056 (R)1ACh10.2%0.0
IN19A043 (R)1GABA10.2%0.0
IN03B058 (R)1GABA10.2%0.0
IN01A020 (L)1ACh10.2%0.0
AN27X015 (L)1Glu10.2%0.0
IN19B088 (L)1ACh0.50.1%0.0
IN00A022 (M)1GABA0.50.1%0.0
IN19B057 (R)1ACh0.50.1%0.0
IN06B085 (L)1GABA0.50.1%0.0
IN17A078 (R)1ACh0.50.1%0.0
IN06B052 (L)1GABA0.50.1%0.0
vMS11 (R)1Glu0.50.1%0.0
IN06B063 (R)1GABA0.50.1%0.0
IN18B026 (L)1ACh0.50.1%0.0
tp1 MN (R)1unc0.50.1%0.0
IN02A007 (L)1Glu0.50.1%0.0
IN10B006 (R)1ACh0.50.1%0.0
IN17A040 (R)1ACh0.50.1%0.0
dPR1 (L)1ACh0.50.1%0.0
vMS16 (L)1unc0.50.1%0.0
IN12A043_d (R)1ACh0.50.1%0.0
IN03B052 (R)1GABA0.50.1%0.0
IN19B090 (R)1ACh0.50.1%0.0
DVMn 2a, b (R)1unc0.50.1%0.0
IN08A011 (R)1Glu0.50.1%0.0
IN17A060 (R)1Glu0.50.1%0.0
TN1a_i (R)1ACh0.50.1%0.0
IN17A040 (L)1ACh0.50.1%0.0
IN14B009 (R)1Glu0.50.1%0.0
IN19B023 (R)1ACh0.50.1%0.0
IN02A007 (R)1Glu0.50.1%0.0
AN05B096 (L)1ACh0.50.1%0.0