Male CNS – Cell Type Explorer

IN17A109(R)[T2]{17A}

1
Total Neurons
Right: 1 | Left: 0
log ratio : -inf
1,001
Total Synapses
Post: 771 | Pre: 230
log ratio : -1.75
1,001
Mean Synapses
Post: 771 | Pre: 230
log ratio : -1.75
ACh(97.4% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (9 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
Ov(R)35345.8%-1.1116370.9%
WTct(UTct-T2)(R)15019.5%-3.23167.0%
VNC-unspecified12316.0%-2.55219.1%
mVAC(T2)(R)709.1%-2.32146.1%
LegNp(T1)(R)354.5%-1.54125.2%
mVAC(T1)(R)293.8%-3.8620.9%
LegNp(T2)(R)91.2%-inf00.0%
IntTct00.0%inf20.9%
LTct20.3%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
IN17A109
%
In
CV
SNpp615ACh8211.1%0.4
SNpp092ACh537.2%0.0
AN02A001 (R)1Glu456.1%0.0
SApp045ACh364.9%0.8
DNge141 (L)1GABA314.2%0.0
SNta051ACh243.2%0.0
AN17B002 (R)1GABA233.1%0.0
SNta136ACh212.8%0.7
SNpp383ACh192.6%0.5
IN00A010 (M)2GABA192.6%0.1
SNxx282ACh182.4%0.4
SNpp427ACh182.4%0.7
IN12B002 (L)1GABA162.2%0.0
SNta333ACh152.0%0.6
IN09A073 (R)3GABA121.6%0.5
IN08B104 (R)2ACh121.6%0.0
IN17A112 (R)1ACh111.5%0.0
IN00A008 (M)1GABA111.5%0.0
IN00A007 (M)1GABA101.3%0.0
DNd03 (R)1Glu101.3%0.0
DNpe031 (R)2Glu101.3%0.4
SNpp461ACh91.2%0.0
IN18B043 (R)1ACh91.2%0.0
IN17A118 (R)2ACh91.2%0.8
AN17B007 (R)1GABA81.1%0.0
IN23B005 (R)2ACh81.1%0.8
SNpp121ACh70.9%0.0
ANXXX109 (R)1GABA70.9%0.0
IN12A030 (R)2ACh70.9%0.4
SNta021ACh60.8%0.0
SNpp051ACh60.8%0.0
AN17B009 (R)1GABA60.8%0.0
SNpp302ACh60.8%0.7
SNta02,SNta094ACh60.8%0.3
IN09A062 (R)1GABA50.7%0.0
INXXX056 (L)1unc50.7%0.0
AN12B001 (L)1GABA50.7%0.0
IN08B105 (R)1ACh40.5%0.0
IN13B104 (L)1GABA40.5%0.0
AN17B002 (L)1GABA40.5%0.0
AN09B007 (L)1ACh40.5%0.0
SNta072ACh40.5%0.5
IN08B085_a (R)2ACh40.5%0.5
IN17A099 (R)2ACh40.5%0.0
IN20A.22A078 (R)1ACh30.4%0.0
SNpp061ACh30.4%0.0
IN09A078 (R)1GABA30.4%0.0
SNpp101ACh30.4%0.0
IN17A085 (R)1ACh30.4%0.0
IN17B017 (R)1GABA30.4%0.0
AN08B099_h (R)1ACh30.4%0.0
AN17B007 (L)1GABA30.4%0.0
AN12B001 (R)1GABA30.4%0.0
dMS5 (R)1ACh20.3%0.0
IN23B074 (L)1ACh20.3%0.0
IN12B002 (R)1GABA20.3%0.0
IN17A109, IN17A120 (R)1ACh20.3%0.0
IN09A067 (R)1GABA20.3%0.0
IN09B038 (L)1ACh20.3%0.0
IN23B008 (R)1ACh20.3%0.0
SNpp311ACh20.3%0.0
IN05B010 (L)1GABA20.3%0.0
IN05B028 (L)1GABA20.3%0.0
AN05B053 (L)1GABA20.3%0.0
AN08B101 (R)1ACh20.3%0.0
AN08B097 (R)1ACh20.3%0.0
AN09B015 (L)1ACh20.3%0.0
AN01B002 (R)1GABA20.3%0.0
AN12B006 (L)1unc20.3%0.0
AN02A001 (L)1Glu20.3%0.0
SNta102ACh20.3%0.0
IN06B078 (R)2GABA20.3%0.0
IN17A078 (R)2ACh20.3%0.0
IN06B043 (L)2GABA20.3%0.0
IN01B007 (R)1GABA10.1%0.0
SNpp281ACh10.1%0.0
IN11B019 (R)1GABA10.1%0.0
IN00A004 (M)1GABA10.1%0.0
IN20A.22A083 (R)1ACh10.1%0.0
IN20A.22A062 (R)1ACh10.1%0.0
IN11B021_c (R)1GABA10.1%0.0
IN10B052 (R)1ACh10.1%0.0
IN12A064 (R)1ACh10.1%0.0
SNxx261ACh10.1%0.0
IN09A075 (R)1GABA10.1%0.0
IN08B051_c (R)1ACh10.1%0.0
IN09A019 (L)1GABA10.1%0.0
IN09A023 (R)1GABA10.1%0.0
IN23B006 (L)1ACh10.1%0.0
IN09A019 (R)1GABA10.1%0.0
IN00A025 (M)1GABA10.1%0.0
INXXX173 (R)1ACh10.1%0.0
IN01A031 (L)1ACh10.1%0.0
IN23B006 (R)1ACh10.1%0.0
IN00A003 (M)1GABA10.1%0.0
INXXX044 (R)1GABA10.1%0.0
IN05B028 (R)1GABA10.1%0.0
INXXX038 (R)1ACh10.1%0.0
DNg24 (R)1GABA10.1%0.0
AN09A005 (L)1unc10.1%0.0
AN08B094 (R)1ACh10.1%0.0
AN08B101 (L)1ACh10.1%0.0
AN06B031 (L)1GABA10.1%0.0
INXXX063 (L)1GABA10.1%0.0
ANXXX264 (R)1GABA10.1%0.0
AN17B011 (R)1GABA10.1%0.0
AN09B015 (R)1ACh10.1%0.0
INXXX056 (R)1unc10.1%0.0
AN12B006 (R)1unc10.1%0.0
AN17B008 (R)1GABA10.1%0.0
DNg104 (L)1unc10.1%0.0
AN12B004 (R)1GABA10.1%0.0
DNge138 (M)1unc10.1%0.0

Outputs

downstream
partner
#NTconns
IN17A109
%
Out
CV
AN09B023 (L)2ACh8013.1%1.0
AN17B005 (R)1GABA569.2%0.0
AN12B001 (R)1GABA416.7%0.0
IN09A019 (R)3GABA396.4%0.4
IN00A063 (M)6GABA315.1%0.7
IN05B010 (L)1GABA294.8%0.0
DNge122 (L)1GABA213.4%0.0
IN00A065 (M)4GABA213.4%1.1
AN09B023 (R)1ACh172.8%0.0
IN09A032 (R)2GABA162.6%0.2
AN08B101 (R)3ACh132.1%0.3
IN17B001 (R)1GABA122.0%0.0
IN17A090 (R)1ACh111.8%0.0
AN09B007 (L)1ACh111.8%0.0
IN09A019 (L)2GABA101.6%0.8
INXXX044 (R)2GABA91.5%0.8
IN00A045 (M)2GABA91.5%0.6
IN23B005 (R)1ACh81.3%0.0
ANXXX027 (L)2ACh81.3%0.8
IN07B012 (R)2ACh81.3%0.2
IN00A060 (M)1GABA71.1%0.0
IN06B013 (L)1GABA71.1%0.0
IN11A025 (R)2ACh71.1%0.4
tpn MN (R)1unc61.0%0.0
IN17A109, IN17A120 (R)1ACh50.8%0.0
IN16B072 (R)1Glu50.8%0.0
IN00A004 (M)1GABA50.8%0.0
AN12B004 (R)1GABA50.8%0.0
IN08B085_a (R)1ACh40.7%0.0
AN09B009 (L)1ACh40.7%0.0
IN06B016 (L)1GABA30.5%0.0
IN17B015 (R)1GABA30.5%0.0
INXXX007 (L)1GABA30.5%0.0
IN17A118 (R)2ACh30.5%0.3
IN17A099 (R)2ACh30.5%0.3
IN17B004 (R)2GABA30.5%0.3
IN05B028 (R)2GABA30.5%0.3
IN02A042 (R)1Glu20.3%0.0
IN16B068_c (R)1Glu20.3%0.0
IN08B105 (R)1ACh20.3%0.0
IN06B078 (R)1GABA20.3%0.0
IN17A088, IN17A089 (R)1ACh20.3%0.0
IN06B043 (L)1GABA20.3%0.0
IN17A048 (R)1ACh20.3%0.0
IN05B019 (R)1GABA20.3%0.0
IN00A007 (M)1GABA20.3%0.0
IN06B013 (R)1GABA20.3%0.0
i2 MN (R)1ACh20.3%0.0
AN08B099_h (R)1ACh20.3%0.0
AN09B021 (L)1Glu20.3%0.0
AN09B021 (R)1Glu20.3%0.0
AN18B032 (L)1ACh20.3%0.0
AN17A004 (R)1ACh20.3%0.0
AN09B029 (R)1ACh20.3%0.0
AN17B016 (L)1GABA20.3%0.0
AN17B016 (R)1GABA20.3%0.0
AN17B009 (R)1GABA20.3%0.0
DNge122 (R)1GABA20.3%0.0
SNta072ACh20.3%0.0
IN05B028 (L)2GABA20.3%0.0
IN00A010 (M)1GABA10.2%0.0
IN17A107 (R)1ACh10.2%0.0
IN00A014 (M)1GABA10.2%0.0
IN03A057 (R)1ACh10.2%0.0
SNxx251ACh10.2%0.0
IN23B014 (R)1ACh10.2%0.0
SNpp421ACh10.2%0.0
IN08B104 (R)1ACh10.2%0.0
IN06B081 (R)1GABA10.2%0.0
IN10B052 (R)1ACh10.2%0.0
IN06B087 (L)1GABA10.2%0.0
SNpp011ACh10.2%0.0
IN17A111 (R)1ACh10.2%0.0
IN17A106_a (R)1ACh10.2%0.0
IN17A078 (R)1ACh10.2%0.0
IN17A072 (R)1ACh10.2%0.0
SNpp061ACh10.2%0.0
IN00A052 (M)1GABA10.2%0.0
SNpp101ACh10.2%0.0
IN00A049 (M)1GABA10.2%0.0
IN08B068 (R)1ACh10.2%0.0
IN17A034 (R)1ACh10.2%0.0
IN08B075 (R)1ACh10.2%0.0
SNta331ACh10.2%0.0
IN08B051_d (L)1ACh10.2%0.0
IN03A045 (R)1ACh10.2%0.0
IN09A023 (R)1GABA10.2%0.0
IN16B068_a (R)1Glu10.2%0.0
INXXX056 (L)1unc10.2%0.0
INXXX045 (L)1unc10.2%0.0
IN12B086 (L)1GABA10.2%0.0
IN18B012 (R)1ACh10.2%0.0
IN10B023 (R)1ACh10.2%0.0
IN06B061 (L)1GABA10.2%0.0
AN17B007 (R)1GABA10.2%0.0
AN17B002 (R)1GABA10.2%0.0
AN09B024 (R)1ACh10.2%0.0