Male CNS – Cell Type Explorer

IN17A107(R)[T2]{17A}

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
717
Total Synapses
Post: 480 | Pre: 237
log ratio : -1.02
717
Mean Synapses
Post: 480 | Pre: 237
log ratio : -1.02
ACh(96.5% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (5 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
WTct(UTct-T2)(R)24551.0%-0.4418075.9%
Ov(R)14329.8%-2.64239.7%
VNC-unspecified5210.8%-1.24229.3%
IntTct408.3%-1.86114.6%
LTct00.0%inf10.4%

Connectivity

Inputs

upstream
partner
#NTconns
IN17A107
%
In
CV
SApp134ACh8017.3%0.6
IN17B004 (R)2GABA398.4%0.8
SApp143ACh378.0%0.7
IN12A030 (R)3ACh326.9%0.7
AN02A001 (R)1Glu255.4%0.0
SApp043ACh245.2%0.4
IN06B003 (L)1GABA214.5%0.0
IN00A010 (M)2GABA204.3%0.3
SNpp104ACh173.7%0.3
IN05B016 (L)1GABA163.5%0.0
AN02A001 (L)1Glu153.2%0.0
IN17B003 (R)1GABA132.8%0.0
IN12B002 (L)1GABA112.4%0.0
IN06B079 (L)3GABA81.7%0.6
IN17A106_a (R)1ACh71.5%0.0
IN00A008 (M)1GABA71.5%0.0
AN17B005 (R)1GABA71.5%0.0
IN06B081 (L)2GABA71.5%0.7
SNpp062ACh71.5%0.1
IN17B001 (R)1GABA61.3%0.0
IN16B068_c (R)1Glu40.9%0.0
IN05B016 (R)1GABA30.6%0.0
IN17A112 (R)1ACh30.6%0.0
SNta042ACh30.6%0.3
IN08A011 (R)2Glu30.6%0.3
IN17A108 (R)1ACh20.4%0.0
SNpp071ACh20.4%0.0
SNpp041ACh20.4%0.0
IN13B104 (L)1GABA20.4%0.0
SNpp051ACh20.4%0.0
IN08A016 (R)1Glu20.4%0.0
AN08B010 (R)1ACh20.4%0.0
SNpp092ACh20.4%0.0
IN13A022 (R)1GABA10.2%0.0
IN27X003 (R)1unc10.2%0.0
IN12A007 (R)1ACh10.2%0.0
IN00A022 (M)1GABA10.2%0.0
SNta141ACh10.2%0.0
SNta04,SNta111ACh10.2%0.0
IN11B021_b (R)1GABA10.2%0.0
IN02A061 (R)1Glu10.2%0.0
IN08B104 (R)1ACh10.2%0.0
IN17A109 (R)1ACh10.2%0.0
IN16B068_b (R)1Glu10.2%0.0
IN16B069 (R)1Glu10.2%0.0
IN17A099 (R)1ACh10.2%0.0
IN19A056 (R)1GABA10.2%0.0
SNpp331ACh10.2%0.0
vMS11 (R)1Glu10.2%0.0
IN08B075 (R)1ACh10.2%0.0
IN17A085 (R)1ACh10.2%0.0
IN17A048 (R)1ACh10.2%0.0
SNpp321ACh10.2%0.0
SNpp301ACh10.2%0.0
IN02A008 (L)1Glu10.2%0.0
IN12A010 (R)1ACh10.2%0.0
IN12A006 (R)1ACh10.2%0.0
IN10B023 (L)1ACh10.2%0.0
IN17B015 (R)1GABA10.2%0.0
INXXX008 (L)1unc10.2%0.0
IN06B003 (R)1GABA10.2%0.0
SApp11,SApp181ACh10.2%0.0
AN08B010 (L)1ACh10.2%0.0
DNge103 (R)1GABA10.2%0.0

Outputs

downstream
partner
#NTconns
IN17A107
%
Out
CV
IN16B069 (R)3Glu8316.4%0.3
tpn MN (R)1unc6112.1%0.0
IN16B062 (R)2Glu265.1%0.6
AN17B013 (R)2GABA234.5%0.1
iii1 MN (R)1unc224.3%0.0
IN16B068_a (R)1Glu204.0%0.0
IN17B004 (R)2GABA122.4%0.7
IN12A044 (R)4ACh112.2%0.5
IN00A022 (M)3GABA112.2%0.3
IN16B068_b (R)1Glu102.0%0.0
IN05B010 (L)1GABA102.0%0.0
IN16B068_c (R)1Glu91.8%0.0
IN06B063 (R)1GABA91.8%0.0
IN17A112 (R)2ACh91.8%0.6
IN06B013 (R)1GABA81.6%0.0
IN06B066 (L)3GABA81.6%0.5
IN11B020 (R)3GABA81.6%0.2
IN06B064 (L)1GABA61.2%0.0
IN17A048 (R)1ACh61.2%0.0
IN17B015 (R)1GABA61.2%0.0
ps1 MN (R)1unc61.2%0.0
i2 MN (R)1ACh61.2%0.0
AN17B016 (R)1GABA61.2%0.0
tpn MN (L)1unc51.0%0.0
IN11A001 (R)1GABA51.0%0.0
AN17B016 (L)1GABA51.0%0.0
AN17B005 (R)1GABA51.0%0.0
IN00A039 (M)2GABA51.0%0.2
IN00A057 (M)2GABA51.0%0.2
IN08B104 (R)2ACh40.8%0.5
IN00A056 (M)2GABA40.8%0.5
IN06B077 (L)2GABA40.8%0.5
IN08B001 (R)1ACh30.6%0.0
IN11B025 (R)1GABA30.6%0.0
IN06B003 (R)1GABA30.6%0.0
AN07B045 (R)1ACh30.6%0.0
AN17A003 (R)1ACh30.6%0.0
AN23B001 (R)1ACh30.6%0.0
AN08B099_a (R)2ACh30.6%0.3
IN19B055 (R)1ACh20.4%0.0
IN03B077 (R)1GABA20.4%0.0
IN06B087 (L)1GABA20.4%0.0
IN17A088, IN17A089 (R)1ACh20.4%0.0
IN08B087 (R)1ACh20.4%0.0
IN17B001 (R)1GABA20.4%0.0
IN12B014 (R)1GABA20.4%0.0
INXXX042 (L)1ACh20.4%0.0
IN07B001 (R)1ACh20.4%0.0
AN08B084 (R)1ACh20.4%0.0
AN08B061 (R)1ACh20.4%0.0
AN04A001 (L)1ACh20.4%0.0
AN05B050_c (R)1GABA20.4%0.0
AN08B074 (R)1ACh20.4%0.0
IN19B086 (R)1ACh10.2%0.0
AN09B036 (L)1ACh10.2%0.0
IN11B014 (R)1GABA10.2%0.0
IN17A099 (R)1ACh10.2%0.0
IN17A071, IN17A081 (R)1ACh10.2%0.0
INXXX201 (L)1ACh10.2%0.0
IN12A007 (R)1ACh10.2%0.0
IN05B001 (R)1GABA10.2%0.0
IN06B081 (L)1GABA10.2%0.0
IN17A108 (R)1ACh10.2%0.0
IN11B021_c (R)1GABA10.2%0.0
IN11B021_d (R)1GABA10.2%0.0
IN17A106_a (R)1ACh10.2%0.0
IN17A078 (R)1ACh10.2%0.0
SNpp29,SNpp631ACh10.2%0.0
IN12A061_c (R)1ACh10.2%0.0
IN17A118 (R)1ACh10.2%0.0
IN17A075 (R)1ACh10.2%0.0
vPR6 (R)1ACh10.2%0.0
IN11A015, IN11A027 (R)1ACh10.2%0.0
IN06B071 (L)1GABA10.2%0.0
IN19A056 (R)1GABA10.2%0.0
dMS2 (R)1ACh10.2%0.0
vMS12_e (R)1ACh10.2%0.0
IN05B028 (L)1GABA10.2%0.0
IN13B104 (R)1GABA10.2%0.0
IN17A085 (R)1ACh10.2%0.0
IN11B005 (R)1GABA10.2%0.0
IN17A030 (R)1ACh10.2%0.0
IN05B016 (L)1GABA10.2%0.0
iii3 MN (R)1unc10.2%0.0
IN17A093 (R)1ACh10.2%0.0
IN12A006 (R)1ACh10.2%0.0
IN19B007 (L)1ACh10.2%0.0
IN19B008 (R)1ACh10.2%0.0
IN12B002 (L)1GABA10.2%0.0
IN07B001 (L)1ACh10.2%0.0
IN23B006 (R)1ACh10.2%0.0
AN27X004 (L)1HA10.2%0.0