Male CNS – Cell Type Explorer

IN17A097(R)[T2]{17A}

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
756
Total Synapses
Post: 541 | Pre: 215
log ratio : -1.33
756
Mean Synapses
Post: 541 | Pre: 215
log ratio : -1.33
ACh(85.1% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (5 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
WTct(UTct-T2)(R)42678.7%-1.2318184.2%
WTct(UTct-T2)(L)448.1%-0.762612.1%
Ov(R)5810.7%-3.8641.9%
VNC-unspecified122.2%-1.5841.9%
LTct10.2%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
IN17A097
%
In
CV
SNpp168ACh11321.9%0.9
SApp044ACh387.4%0.5
IN06B079 (L)6GABA377.2%0.7
IN06B085 (L)4GABA316.0%0.3
IN06B069 (L)3GABA254.9%0.9
SNpp051ACh234.5%0.0
IN06B066 (L)7GABA203.9%0.8
IN17A085 (R)2ACh193.7%0.8
IN17A100 (R)1ACh183.5%0.0
IN06B085 (R)4GABA163.1%0.5
IN19B086 (L)3ACh152.9%0.6
IN03B089 (R)4GABA132.5%0.5
IN19A056 (R)3GABA122.3%0.9
IN19A056 (L)2GABA112.1%0.3
INXXX044 (R)1GABA101.9%0.0
IN19B086 (R)4ACh81.6%0.6
DNd03 (R)1Glu61.2%0.0
IN17A111 (L)2ACh61.2%0.7
IN17A111 (R)2ACh61.2%0.3
IN17A100 (L)1ACh51.0%0.0
AN17B005 (R)1GABA51.0%0.0
IN06B069 (R)2GABA51.0%0.2
IN06B074 (L)1GABA40.8%0.0
IN17A097 (L)1ACh40.8%0.0
IN12B016 (R)1GABA30.6%0.0
IN08A040 (R)1Glu30.6%0.0
IN27X003 (L)1unc30.6%0.0
IN00A017 (M)1unc30.6%0.0
IN17B015 (R)1GABA30.6%0.0
DNp48 (L)1ACh30.6%0.0
IN03B091 (R)1GABA20.4%0.0
IN19A043 (R)1GABA20.4%0.0
IN19B070 (L)1ACh20.4%0.0
IN08A011 (R)1Glu20.4%0.0
IN27X007 (R)1unc20.4%0.0
IN12A002 (R)1ACh20.4%0.0
IN17B004 (R)1GABA20.4%0.0
IN12B002 (L)1GABA20.4%0.0
IN03A003 (L)1ACh20.4%0.0
SNpp082ACh20.4%0.0
IN19B067 (R)1ACh10.2%0.0
SNpp091ACh10.2%0.0
IN11B013 (R)1GABA10.2%0.0
SNpp2315-HT10.2%0.0
IN03B058 (L)1GABA10.2%0.0
SNpp281ACh10.2%0.0
IN06B070 (L)1GABA10.2%0.0
SNxx261ACh10.2%0.0
SNpp381ACh10.2%0.0
IN19B091 (L)1ACh10.2%0.0
IN08A040 (L)1Glu10.2%0.0
IN18B042 (L)1ACh10.2%0.0
IN19B082 (L)1ACh10.2%0.0
IN19B077 (L)1ACh10.2%0.0
IN13B104 (R)1GABA10.2%0.0
IN05B016 (L)1GABA10.2%0.0
IN12B016 (L)1GABA10.2%0.0
IN17B003 (R)1GABA10.2%0.0
IN06A005 (L)1GABA10.2%0.0
i2 MN (R)1ACh10.2%0.0
dMS2 (R)1ACh10.2%0.0
IN05B028 (R)1GABA10.2%0.0
IN02A004 (R)1Glu10.2%0.0
IN05B010 (L)1GABA10.2%0.0
IN05B028 (L)1GABA10.2%0.0
AN06B031 (L)1GABA10.2%0.0
DNge150 (M)1unc10.2%0.0

Outputs

downstream
partner
#NTconns
IN17A097
%
Out
CV
mesVUM-MJ (M)1unc7217.5%0.0
IN08A011 (R)5Glu6415.6%0.7
IN03B058 (R)5GABA276.6%0.7
IN17A085 (R)2ACh266.3%0.7
IN19B075 (R)3ACh256.1%0.7
IN11B015 (R)4GABA225.4%0.4
IN03B058 (L)4GABA184.4%0.5
IN08A011 (L)2Glu122.9%0.3
IN19B086 (R)4ACh122.9%0.8
IN06B066 (L)4GABA81.9%0.9
IN17A111 (R)2ACh81.9%0.0
IN03B052 (R)1GABA71.7%0.0
IN17A100 (R)1ACh61.5%0.0
IN17A071, IN17A081 (R)2ACh51.2%0.6
IN19B057 (R)2ACh51.2%0.6
IN19A056 (R)2GABA51.2%0.2
IN11B014 (R)1GABA41.0%0.0
IN17A097 (L)1ACh41.0%0.0
IN19A056 (L)1GABA41.0%0.0
IN11B015 (L)2GABA41.0%0.0
IN03B071 (R)2GABA41.0%0.0
IN19A043 (R)1GABA30.7%0.0
IN17A077 (R)1ACh30.7%0.0
IN19B007 (R)1ACh30.7%0.0
IN19B075 (L)2ACh30.7%0.3
DLMn c-f (R)2unc30.7%0.3
IN03B056 (R)1GABA20.5%0.0
AN05B050_c (L)1GABA20.5%0.0
INXXX095 (L)1ACh20.5%0.0
IN17A111 (L)1ACh20.5%0.0
IN06B061 (L)1GABA20.5%0.0
IN18B042 (R)1ACh20.5%0.0
IN18B042 (L)1ACh20.5%0.0
IN11A006 (R)1ACh20.5%0.0
DVMn 1a-c (R)1unc20.5%0.0
AN05B052 (L)1GABA20.5%0.0
IN06B085 (L)2GABA20.5%0.0
IN17A088, IN17A089 (R)2ACh20.5%0.0
DVMn 1a-c (L)1unc10.2%0.0
IN19B103 (L)1ACh10.2%0.0
IN19B086 (L)1ACh10.2%0.0
IN12B016 (R)1GABA10.2%0.0
IN19B043 (R)1ACh10.2%0.0
IN00A022 (M)1GABA10.2%0.0
IN00A039 (M)1GABA10.2%0.0
MNxm01 (L)1unc10.2%0.0
IN17A101 (R)1ACh10.2%0.0
IN17A100 (L)1ACh10.2%0.0
IN06B069 (L)1GABA10.2%0.0
IN06B079 (L)1GABA10.2%0.0
IN17A095 (R)1ACh10.2%0.0
IN19B057 (L)1ACh10.2%0.0
IN17A072 (R)1ACh10.2%0.0
IN16B099 (R)1Glu10.2%0.0
IN16B072 (R)1Glu10.2%0.0
IN06B083 (L)1GABA10.2%0.0
SNpp161ACh10.2%0.0
IN03B049 (R)1GABA10.2%0.0
IN06B047 (L)1GABA10.2%0.0
IN18B043 (R)1ACh10.2%0.0
SNpp051ACh10.2%0.0
IN00A001 (M)1unc10.2%0.0
IN17A048 (R)1ACh10.2%0.0
DLMn a, b (L)1unc10.2%0.0
IN03B052 (L)1GABA10.2%0.0
IN19B007 (L)1ACh10.2%0.0
IN12B011 (L)1GABA10.2%0.0
IN11A001 (L)1GABA10.2%0.0