Male CNS – Cell Type Explorer

IN17A085(L)[T2]{17A}

4
Total Neurons
Right: 2 | Left: 2
log ratio : 0.00
2,225
Total Synapses
Post: 1,570 | Pre: 655
log ratio : -1.26
1,112.5
Mean Synapses
Post: 785 | Pre: 327.5
log ratio : -1.26
ACh(91.9% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (7 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
WTct(UTct-T2)(L)1,06968.1%-0.9057287.3%
Ov(L)44228.2%-2.547611.6%
VNC-unspecified412.6%-4.3620.3%
IntTct50.3%-1.3220.3%
ADMN(L)60.4%-inf00.0%
LTct20.1%0.5830.5%
WTct(UTct-T2)(R)50.3%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
IN17A085
%
In
CV
SNpp168ACh98.512.9%0.9
SApp044ACh95.512.5%0.3
IN06B079 (R)6GABA749.7%0.5
SNpp051ACh618.0%0.0
IN18B043 (L)1ACh43.55.7%0.0
IN17B004 (L)1GABA38.55.0%0.0
SNta074ACh202.6%0.8
SNpp092ACh182.3%0.4
SNta051ACh172.2%0.0
SNxx266ACh141.8%1.4
SNta064ACh13.51.8%1.0
IN19B086 (R)4ACh131.7%0.7
vMS11 (L)7Glu131.7%0.7
AN02A001 (L)1Glu121.6%0.0
IN17B015 (L)1GABA10.51.4%0.0
AN17B005 (L)1GABA101.3%0.0
IN17A085 (L)2ACh8.51.1%0.3
SNta133ACh70.9%0.8
INXXX044 (L)2GABA6.50.8%0.8
SNta021ACh6.50.8%0.0
SApp133ACh6.50.8%0.3
SNpp062ACh60.8%0.5
IN19A056 (L)2GABA60.8%0.3
IN05B016 (R)1GABA5.50.7%0.0
IN17A097 (L)1ACh50.7%0.0
IN08A011 (L)7Glu50.7%0.3
IN11A001 (L)1GABA4.50.6%0.0
SNxx252ACh4.50.6%0.1
IN02A010 (L)2Glu40.5%0.0
SNta02,SNta093ACh3.50.5%0.5
IN06B079 (L)2GABA3.50.5%0.1
IN06B085 (R)3GABA3.50.5%0.4
IN06B066 (R)3GABA3.50.5%0.2
SNxx241unc30.4%0.0
IN12B016 (L)1GABA30.4%0.0
IN19B067 (L)2ACh30.4%0.7
ANXXX264 (L)1GABA2.50.3%0.0
IN06B083 (R)1GABA2.50.3%0.0
IN06B071 (R)2GABA2.50.3%0.2
IN19B086 (L)3ACh2.50.3%0.6
IN12A002 (L)1ACh2.50.3%0.0
IN06B069 (R)3GABA2.50.3%0.3
IN05B010 (R)1GABA20.3%0.0
IN19A043 (L)1GABA20.3%0.0
IN17A078 (L)2ACh20.3%0.5
SNpp383ACh20.3%0.4
IN13B104 (L)1GABA20.3%0.0
IN17B001 (L)1GABA20.3%0.0
IN12B002 (R)2GABA20.3%0.0
IN06B074 (R)3GABA20.3%0.4
IN03B089 (L)3GABA20.3%0.4
IN17A093 (L)2ACh20.3%0.0
IN13A022 (L)2GABA20.3%0.5
IN12A030 (L)2ACh20.3%0.5
SNpp333ACh20.3%0.4
IN16B068_b (L)1Glu1.50.2%0.0
IN00A008 (M)1GABA1.50.2%0.0
AN27X004 (R)1HA1.50.2%0.0
IN19A042 (L)1GABA1.50.2%0.0
IN17A100 (L)1ACh1.50.2%0.0
IN17B001 (R)1GABA1.50.2%0.0
INXXX063 (R)1GABA1.50.2%0.0
IN05B001 (L)1GABA1.50.2%0.0
IN01A031 (R)1ACh1.50.2%0.0
IN11B021_b (L)2GABA1.50.2%0.3
IN08B104 (L)2ACh1.50.2%0.3
IN17A064 (L)2ACh1.50.2%0.3
AN02A001 (R)1Glu1.50.2%0.0
INXXX008 (R)1unc1.50.2%0.0
DNd03 (L)1Glu1.50.2%0.0
IN19B091 (R)3ACh1.50.2%0.0
IN17A088, IN17A089 (L)2ACh1.50.2%0.3
IN17A112 (L)1ACh10.1%0.0
SNpp311ACh10.1%0.0
IN12B016 (R)1GABA10.1%0.0
IN11A020 (L)1ACh10.1%0.0
IN11B013 (L)1GABA10.1%0.0
SNpp2315-HT10.1%0.0
IN19B057 (L)1ACh10.1%0.0
SNpp611ACh10.1%0.0
IN27X003 (L)1unc10.1%0.0
IN00A001 (M)1unc10.1%0.0
DNge150 (M)1unc10.1%0.0
IN03B058 (L)2GABA10.1%0.0
IN19A057 (L)1GABA10.1%0.0
SNta112ACh10.1%0.0
SNpp372ACh10.1%0.0
IN18B043 (R)1ACh10.1%0.0
SApp102ACh10.1%0.0
AN08B074 (L)2ACh10.1%0.0
IN19A056 (R)2GABA10.1%0.0
IN08A040 (L)2Glu10.1%0.0
AN08B047 (L)1ACh0.50.1%0.0
IN00A022 (M)1GABA0.50.1%0.0
IN16B062 (L)1Glu0.50.1%0.0
SNpp111ACh0.50.1%0.0
SNpp281ACh0.50.1%0.0
IN17A106_a (L)1ACh0.50.1%0.0
IN16B068_c (L)1Glu0.50.1%0.0
IN18B049 (R)1ACh0.50.1%0.0
IN18B042 (L)1ACh0.50.1%0.0
vPR6 (L)1ACh0.50.1%0.0
IN18B042 (R)1ACh0.50.1%0.0
IN17A033 (L)1ACh0.50.1%0.0
IN06B077 (R)1GABA0.50.1%0.0
IN16B072 (L)1Glu0.50.1%0.0
IN17A035 (L)1ACh0.50.1%0.0
IN18B035 (R)1ACh0.50.1%0.0
SNpp321ACh0.50.1%0.0
IN17A059,IN17A063 (L)1ACh0.50.1%0.0
INXXX076 (R)1ACh0.50.1%0.0
IN01A017 (R)1ACh0.50.1%0.0
IN10B006 (R)1ACh0.50.1%0.0
IN03A003 (L)1ACh0.50.1%0.0
vMS16 (R)1unc0.50.1%0.0
vMS16 (L)1unc0.50.1%0.0
AN17A004 (L)1ACh0.50.1%0.0
DNge149 (M)1unc0.50.1%0.0
DNg98 (L)1GABA0.50.1%0.0
IN27X003 (R)1unc0.50.1%0.0
IN19B067 (R)1ACh0.50.1%0.0
IN16B063 (L)1Glu0.50.1%0.0
IN11B025 (L)1GABA0.50.1%0.0
IN17A095 (L)1ACh0.50.1%0.0
IN03B046 (L)1GABA0.50.1%0.0
IN17A102 (L)1ACh0.50.1%0.0
IN03B089 (R)1GABA0.50.1%0.0
IN06B085 (L)1GABA0.50.1%0.0
SNpp211ACh0.50.1%0.0
IN11B021_c (L)1GABA0.50.1%0.0
IN17A106_b (L)1ACh0.50.1%0.0
IN17A071, IN17A081 (L)1ACh0.50.1%0.0
IN19B075 (L)1ACh0.50.1%0.0
IN23B006 (L)1ACh0.50.1%0.0
IN07B048 (L)1ACh0.50.1%0.0
IN03B053 (L)1GABA0.50.1%0.0
IN13B104 (R)1GABA0.50.1%0.0
IN06B070 (R)1GABA0.50.1%0.0
INXXX201 (R)1ACh0.50.1%0.0
IN00A017 (M)1unc0.50.1%0.0
IN12B014 (L)1GABA0.50.1%0.0
IN27X007 (R)1unc0.50.1%0.0
IN06A005 (R)1GABA0.50.1%0.0
INXXX095 (R)1ACh0.50.1%0.0
INXXX008 (L)1unc0.50.1%0.0
IN05B028 (L)1GABA0.50.1%0.0
AN09A005 (L)1unc0.50.1%0.0
ANXXX027 (R)1ACh0.50.1%0.0
AN08B084 (L)1ACh0.50.1%0.0
AN23B001 (L)1ACh0.50.1%0.0
DNge138 (M)1unc0.50.1%0.0

Outputs

downstream
partner
#NTconns
IN17A085
%
Out
CV
IN08A011 (L)7Glu9912.6%1.0
IN06B047 (R)6GABA98.512.5%1.0
tpn MN (L)1unc80.510.2%0.0
IN18B043 (L)1ACh29.53.8%0.0
IN11B014 (L)2GABA263.3%0.9
IN19A043 (L)2GABA24.53.1%0.2
IN17A078 (L)3ACh222.8%0.1
IN17A049 (L)3ACh21.52.7%0.8
IN03B058 (L)6GABA151.9%0.8
IN17A064 (L)4ACh13.51.7%0.6
IN17A118 (L)1ACh121.5%0.0
IN12A002 (L)1ACh111.4%0.0
IN03B071 (L)5GABA111.4%0.6
i2 MN (L)1ACh10.51.3%0.0
IN11A001 (L)1GABA10.51.3%0.0
IN00A022 (M)4GABA10.51.3%0.5
IN18B042 (R)2ACh101.3%0.1
IN17A109, IN17A120 (L)2ACh91.1%0.2
IN17A085 (L)2ACh8.51.1%0.3
DVMn 1a-c (L)1unc8.51.1%0.0
IN17A071, IN17A081 (L)2ACh81.0%0.4
AN17A003 (L)1ACh7.51.0%0.0
tpn MN (R)1unc70.9%0.0
IN17A097 (L)1ACh70.9%0.0
IN05B016 (L)1GABA70.9%0.0
IN19A056 (L)2GABA70.9%0.4
IN18B042 (L)2ACh6.50.8%0.1
IN08B104 (L)2ACh6.50.8%0.4
IN19A057 (L)1GABA60.8%0.0
IN05B016 (R)2GABA60.8%0.3
IN17A099 (L)2ACh5.50.7%0.5
AN05B050_c (R)2GABA5.50.7%0.8
IN00A039 (M)2GABA5.50.7%0.1
IN10B006 (R)1ACh4.50.6%0.0
IN16B072 (L)1Glu4.50.6%0.0
IN19B057 (L)3ACh4.50.6%0.7
IN11B020 (L)3GABA40.5%0.4
IN03B058 (R)2GABA40.5%0.5
IN12A044 (L)4ACh40.5%0.4
IN16B016 (L)1Glu3.50.4%0.0
IN03B052 (L)1GABA30.4%0.0
IN17B015 (L)1GABA30.4%0.0
AN08B074 (L)2ACh30.4%0.7
IN18B027 (L)1ACh30.4%0.0
IN19B008 (L)1ACh30.4%0.0
AN08B047 (L)1ACh2.50.3%0.0
dMS2 (L)1ACh2.50.3%0.0
IN03B074 (L)1GABA2.50.3%0.0
IN03B024 (L)1GABA2.50.3%0.0
IN08B006 (L)1ACh2.50.3%0.0
IN06B066 (R)3GABA2.50.3%0.6
IN06B061 (R)2GABA2.50.3%0.2
IN19A049 (L)1GABA20.3%0.0
AN08B047 (R)1ACh20.3%0.0
IN17A045 (L)1ACh20.3%0.0
IN17A112 (L)1ACh20.3%0.0
IN13B080 (R)1GABA20.3%0.0
IN13B008 (R)1GABA20.3%0.0
IN02A004 (L)1Glu20.3%0.0
DNd03 (L)1Glu20.3%0.0
IN06B059 (L)2GABA20.3%0.5
vMS11 (L)2Glu20.3%0.5
INXXX008 (R)1unc20.3%0.0
IN02A010 (L)2Glu20.3%0.0
SNpp164ACh20.3%0.0
IN12A043_b (R)1ACh1.50.2%0.0
IN03B076 (L)1GABA1.50.2%0.0
IN06B040 (R)1GABA1.50.2%0.0
AN06B031 (R)1GABA1.50.2%0.0
AN17B016 (R)1GABA1.50.2%0.0
dPR1 (R)1ACh1.50.2%0.0
IN01A031 (R)1ACh1.50.2%0.0
INXXX119 (R)1GABA1.50.2%0.0
IN06B071 (R)2GABA1.50.2%0.3
IN11A002 (L)2ACh1.50.2%0.3
dPR1 (L)1ACh1.50.2%0.0
ANXXX033 (L)1ACh1.50.2%0.0
IN06B085 (L)2GABA1.50.2%0.3
IN17A111 (L)2ACh1.50.2%0.3
IN17A106_b (L)1ACh1.50.2%0.0
IN01A017 (R)1ACh1.50.2%0.0
IN03B046 (L)2GABA1.50.2%0.3
IN17B004 (L)1GABA10.1%0.0
IN00A047 (M)1GABA10.1%0.0
IN17A095 (L)1ACh10.1%0.0
IN03B077 (L)1GABA10.1%0.0
IN11B021_b (L)1GABA10.1%0.0
IN19B103 (R)1ACh10.1%0.0
IN12A046_b (L)1ACh10.1%0.0
IN19B086 (L)1ACh10.1%0.0
DVMn 3a, b (L)1unc10.1%0.0
IN11B013 (L)1GABA10.1%0.0
ANXXX264 (L)1GABA10.1%0.0
AN08B061 (L)1ACh10.1%0.0
IN19B070 (R)1ACh10.1%0.0
IN16B062 (L)1Glu10.1%0.0
IN17A100 (L)1ACh10.1%0.0
IN02A042 (L)1Glu10.1%0.0
IN06A037 (L)1GABA10.1%0.0
mesVUM-MJ (M)1unc10.1%0.0
IN12A006 (L)1ACh10.1%0.0
AN08B099_d (L)1ACh10.1%0.0
AN01A021 (R)1ACh10.1%0.0
IN06B079 (R)2GABA10.1%0.0
IN19B075 (L)1ACh10.1%0.0
IN16B068_a (L)1Glu10.1%0.0
IN17A107 (L)1ACh10.1%0.0
IN19B067 (L)2ACh10.1%0.0
AN05B097 (L)1ACh10.1%0.0
AN08B074 (R)1ACh10.1%0.0
AN17B016 (L)1GABA10.1%0.0
SNpp091ACh0.50.1%0.0
IN08B003 (L)1GABA0.50.1%0.0
IN19B043 (R)1ACh0.50.1%0.0
IN19A042 (L)1GABA0.50.1%0.0
INXXX011 (L)1ACh0.50.1%0.0
IN11B019 (L)1GABA0.50.1%0.0
IN11B021_c (L)1GABA0.50.1%0.0
IN11B025 (L)1GABA0.50.1%0.0
IN19B091 (R)1ACh0.50.1%0.0
IN05B028 (R)1GABA0.50.1%0.0
SNpp131ACh0.50.1%0.0
IN08B051_c (R)1ACh0.50.1%0.0
IN06B074 (R)1GABA0.50.1%0.0
IN17A072 (L)1ACh0.50.1%0.0
IN17A075 (L)1ACh0.50.1%0.0
IN19B043 (L)1ACh0.50.1%0.0
IN03B053 (L)1GABA0.50.1%0.0
IN08B078 (R)1ACh0.50.1%0.0
IN06B077 (R)1GABA0.50.1%0.0
IN00A038 (M)1GABA0.50.1%0.0
IN17B001 (R)1GABA0.50.1%0.0
IN12B016 (L)1GABA0.50.1%0.0
iii1 MN (L)1unc0.50.1%0.0
IN12A005 (L)1ACh0.50.1%0.0
b2 MN (L)1ACh0.50.1%0.0
INXXX095 (R)1ACh0.50.1%0.0
DNg70 (R)1GABA0.50.1%0.0
IN19B086 (R)1ACh0.50.1%0.0
IN19A056 (R)1GABA0.50.1%0.0
IN27X003 (R)1unc0.50.1%0.0
IN17A048 (L)1ACh0.50.1%0.0
IN17A088, IN17A089 (L)1ACh0.50.1%0.0
IN06B085 (R)1GABA0.50.1%0.0
IN19B090 (R)1ACh0.50.1%0.0
IN16B069 (L)1Glu0.50.1%0.0
SNta071ACh0.50.1%0.0
IN16B068_b (L)1Glu0.50.1%0.0
IN16B068_c (L)1Glu0.50.1%0.0
IN23B061 (L)1ACh0.50.1%0.0
IN17A093 (L)1ACh0.50.1%0.0
SNxx241unc0.50.1%0.0
SNta021ACh0.50.1%0.0
IN11A004 (L)1ACh0.50.1%0.0
IN17A057 (L)1ACh0.50.1%0.0
IN17A085 (R)1ACh0.50.1%0.0
IN13B104 (L)1GABA0.50.1%0.0
IN17A059,IN17A063 (L)1ACh0.50.1%0.0
IN19B031 (L)1ACh0.50.1%0.0
DLMn c-f (L)1unc0.50.1%0.0
IN12B014 (L)1GABA0.50.1%0.0
hg3 MN (L)1GABA0.50.1%0.0
MNwm35 (L)1unc0.50.1%0.0
AN23B001 (L)1ACh0.50.1%0.0
AN09B007 (R)1ACh0.50.1%0.0
AN17A026 (L)1ACh0.50.1%0.0
DNpe031 (L)1Glu0.50.1%0.0