Male CNS – Cell Type Explorer

IN17A055(R)[T2]{17A}

1
Total Neurons
Right: 1 | Left: 0
log ratio : -inf
1,930
Total Synapses
Post: 1,654 | Pre: 276
log ratio : -2.58
1,930
Mean Synapses
Post: 1,654 | Pre: 276
log ratio : -2.58
ACh(97.1% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (7 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
WTct(UTct-T2)(R)1,10166.6%-2.7116860.9%
VNC-unspecified19812.0%-2.583312.0%
Ov(R)21112.8%-6.1431.1%
IntTct653.9%-0.504616.7%
LTct281.7%-0.22248.7%
LegNp(T2)(R)432.6%-4.4320.7%
PDMN(R)80.5%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
IN17A055
%
In
CV
IN03A011 (R)1ACh1036.5%0.0
IN17A059,IN17A063 (R)2ACh885.5%0.3
IN12A010 (R)1ACh674.2%0.0
IN03B071 (R)6GABA593.7%0.9
IN06B063 (R)5GABA533.3%0.5
IN18B043 (R)1ACh493.1%0.0
IN16B063 (R)2Glu382.4%0.3
IN03B038 (R)1GABA322.0%0.0
SNta135ACh322.0%0.6
IN06A016 (L)1GABA291.8%0.0
IN11A006 (R)2ACh281.8%0.1
IN06B071 (L)3GABA271.7%0.4
IN06B047 (L)6GABA271.7%0.9
IN06B036 (L)2GABA261.6%0.8
IN17B015 (R)1GABA251.6%0.0
IN11A014 (R)2ACh241.5%0.7
IN16B099 (R)5Glu241.5%1.0
IN17A049 (R)2ACh241.5%0.1
IN17B004 (R)2GABA231.4%0.1
IN06B074 (L)5GABA231.4%0.5
IN11A002 (R)2ACh211.3%0.4
IN16B072 (R)1Glu201.3%0.0
IN09A007 (R)1GABA181.1%0.0
DNd03 (R)1Glu181.1%0.0
IN06B038 (L)2GABA171.1%0.3
IN16B068_c (R)1Glu161.0%0.0
IN17A011 (R)1ACh150.9%0.0
INXXX101 (L)1ACh150.9%0.0
IN17A020 (R)2ACh150.9%0.2
DNg74_b (L)1GABA140.9%0.0
IN17A112 (R)2ACh140.9%0.9
IN01A031 (L)1ACh130.8%0.0
IN12A009 (R)1ACh130.8%0.0
AN02A001 (R)1Glu130.8%0.0
IN10B007 (L)1ACh120.8%0.0
TN1a_g (L)2ACh120.8%0.8
dMS2 (R)4ACh120.8%0.6
IN11B004 (R)1GABA110.7%0.0
DNg27 (L)1Glu110.7%0.0
IN12A030 (R)2ACh110.7%0.3
IN06A037 (L)1GABA100.6%0.0
IN10B023 (L)1ACh100.6%0.0
IN12A012 (R)1GABA90.6%0.0
TN1a_i (L)1ACh90.6%0.0
IN06B013 (L)1GABA90.6%0.0
TN1a_g (R)2ACh90.6%0.1
TN1a_i (R)1ACh80.5%0.0
IN13B104 (R)1GABA80.5%0.0
IN06B013 (R)1GABA80.5%0.0
IN02A008 (R)1Glu80.5%0.0
IN06B003 (L)1GABA80.5%0.0
IN04B006 (R)1ACh80.5%0.0
SNpp332ACh80.5%0.5
IN17A043, IN17A046 (R)1ACh70.4%0.0
IN17A033 (R)1ACh70.4%0.0
IN13B104 (L)1GABA70.4%0.0
IN05B028 (L)1GABA70.4%0.0
ANXXX132 (L)1ACh70.4%0.0
DNg108 (L)1GABA70.4%0.0
SNpp042ACh70.4%0.7
IN06B050 (L)1GABA60.4%0.0
AN02A001 (L)1Glu60.4%0.0
SNpp322ACh60.4%0.7
IN03B053 (R)2GABA60.4%0.0
vPR6 (R)2ACh60.4%0.0
SNta184ACh60.4%0.3
IN16B068_b (R)1Glu50.3%0.0
IN17A034 (R)1ACh50.3%0.0
IN12B014 (L)1GABA50.3%0.0
IN10B003 (L)1ACh50.3%0.0
IN17A078 (R)2ACh50.3%0.2
IN06B055 (L)2GABA50.3%0.2
SNpp373ACh50.3%0.3
IN06B080 (R)1GABA40.3%0.0
IN11A004 (R)1ACh40.3%0.0
IN02A008 (L)1Glu40.3%0.0
IN19B107 (L)1ACh40.3%0.0
AN09B013 (L)1ACh40.3%0.0
DNg15 (L)1ACh40.3%0.0
IN19B089 (L)2ACh40.3%0.5
vPR6 (L)2ACh40.3%0.0
IN03B058 (R)3GABA40.3%0.4
IN03A045 (R)2ACh40.3%0.0
SNpp302ACh40.3%0.0
IN11B024_c (R)1GABA30.2%0.0
IN05B016 (L)1GABA30.2%0.0
IN12A007 (R)1ACh30.2%0.0
IN11A021 (R)1ACh30.2%0.0
IN12A044 (R)1ACh30.2%0.0
IN01A024 (L)1ACh30.2%0.0
IN03B084 (R)1GABA30.2%0.0
IN08B035 (L)1ACh30.2%0.0
IN18B035 (L)1ACh30.2%0.0
IN06B042 (R)1GABA30.2%0.0
IN01A017 (L)1ACh30.2%0.0
IN05B033 (R)1GABA30.2%0.0
IN04B002 (R)1ACh30.2%0.0
IN06B006 (R)1GABA30.2%0.0
IN11B004 (L)1GABA30.2%0.0
INXXX038 (R)1ACh30.2%0.0
AN27X004 (L)1HA30.2%0.0
vMS16 (R)1unc30.2%0.0
ANXXX152 (L)1ACh30.2%0.0
AN17B005 (R)1GABA30.2%0.0
DNge122 (L)1GABA30.2%0.0
DNg93 (L)1GABA30.2%0.0
IN00A022 (M)2GABA30.2%0.3
SNta072ACh30.2%0.3
IN06B052 (L)2GABA30.2%0.3
IN00A038 (M)2GABA30.2%0.3
SApp042ACh30.2%0.3
SApp131ACh20.1%0.0
IN11B024_b (R)1GABA20.1%0.0
SNpp101ACh20.1%0.0
SNpp091ACh20.1%0.0
IN11A008 (R)1ACh20.1%0.0
IN17A108 (R)1ACh20.1%0.0
SNta02,SNta091ACh20.1%0.0
IN05B073 (L)1GABA20.1%0.0
SNta021ACh20.1%0.0
IN19A032 (R)1ACh20.1%0.0
SNta111ACh20.1%0.0
IN08B085_a (L)1ACh20.1%0.0
IN08B051_e (R)1ACh20.1%0.0
IN17A099 (R)1ACh20.1%0.0
IN17A027 (R)1ACh20.1%0.0
IN17B017 (R)1GABA20.1%0.0
SNpp311ACh20.1%0.0
IN08B017 (R)1ACh20.1%0.0
IN19B008 (R)1ACh20.1%0.0
IN02A007 (R)1Glu20.1%0.0
IN05B028 (R)1GABA20.1%0.0
IN06B003 (R)1GABA20.1%0.0
dPR1 (L)1ACh20.1%0.0
IN05B010 (L)1GABA20.1%0.0
AN18B004 (L)1ACh20.1%0.0
AN08B005 (R)1ACh20.1%0.0
AN07B032 (L)1ACh20.1%0.0
AN17A003 (R)1ACh20.1%0.0
dMS9 (L)1ACh20.1%0.0
DNge029 (L)1Glu20.1%0.0
DNp34 (L)1ACh20.1%0.0
DNae009 (R)1ACh20.1%0.0
IN12A035 (R)2ACh20.1%0.0
IN11B013 (R)2GABA20.1%0.0
IN16B092 (R)2Glu20.1%0.0
IN03B080 (R)2GABA20.1%0.0
SNta142ACh20.1%0.0
SNta11,SNta142ACh20.1%0.0
IN19B091 (L)2ACh20.1%0.0
IN08A011 (R)2Glu20.1%0.0
vPR9_a (M)2GABA20.1%0.0
IN12B002 (L)2GABA20.1%0.0
IN06B079 (L)1GABA10.1%0.0
dMS5 (R)1ACh10.1%0.0
AN09B036 (L)1ACh10.1%0.0
SNpp061ACh10.1%0.0
IN21A049 (R)1Glu10.1%0.0
IN06A033 (L)1GABA10.1%0.0
IN06B081 (L)1GABA10.1%0.0
INXXX119 (L)1GABA10.1%0.0
INXXX201 (L)1ACh10.1%0.0
IN06B067 (R)1GABA10.1%0.0
IN08B035 (R)1ACh10.1%0.0
IN11A019 (R)1ACh10.1%0.0
IN03B066 (R)1GABA10.1%0.0
IN17A096 (R)1ACh10.1%0.0
IN06A128 (L)1GABA10.1%0.0
IN19B097 (L)1ACh10.1%0.0
IN11B019 (R)1GABA10.1%0.0
IN16B069 (R)1Glu10.1%0.0
IN08B051_d (R)1ACh10.1%0.0
IN04B084 (R)1ACh10.1%0.0
SNxx281ACh10.1%0.0
IN12A057_b (L)1ACh10.1%0.0
IN06B061 (L)1GABA10.1%0.0
IN06B043 (L)1GABA10.1%0.0
IN19A042 (R)1GABA10.1%0.0
IN06B058 (R)1GABA10.1%0.0
INXXX142 (L)1ACh10.1%0.0
IN07B039 (L)1ACh10.1%0.0
IN16B068_a (R)1Glu10.1%0.0
IN08B068 (L)1ACh10.1%0.0
IN17A039 (R)1ACh10.1%0.0
SNta101ACh10.1%0.0
SNta051ACh10.1%0.0
IN12A025 (R)1ACh10.1%0.0
vPR9_c (M)1GABA10.1%0.0
IN08A016 (R)1Glu10.1%0.0
IN18B020 (L)1ACh10.1%0.0
IN05B019 (R)1GABA10.1%0.0
IN19B033 (L)1ACh10.1%0.0
IN17A093 (R)1ACh10.1%0.0
IN03B024 (L)1GABA10.1%0.0
IN10B023 (R)1ACh10.1%0.0
INXXX008 (L)1unc10.1%0.0
TN1a_h (L)1ACh10.1%0.0
IN10B006 (L)1ACh10.1%0.0
INXXX044 (R)1GABA10.1%0.0
IN06B059 (R)1GABA10.1%0.0
IN12A002 (R)1ACh10.1%0.0
IN19B007 (L)1ACh10.1%0.0
IN03A003 (R)1ACh10.1%0.0
AN05B096 (R)1ACh10.1%0.0
AN08B061 (R)1ACh10.1%0.0
AN05B056 (L)1GABA10.1%0.0
AN09B021 (L)1Glu10.1%0.0
AN08B074 (L)1ACh10.1%0.0
ANXXX055 (L)1ACh10.1%0.0
ANXXX002 (L)1GABA10.1%0.0
DNpe056 (R)1ACh10.1%0.0
AN02A002 (R)1Glu10.1%0.0
DNp27 (R)1ACh10.1%0.0

Outputs

downstream
partner
#NTconns
IN17A055
%
Out
CV
b1 MN (R)1unc13425.0%0.0
b2 MN (R)1ACh5810.8%0.0
MNwm35 (R)1unc5710.6%0.0
IN17A049 (R)2ACh458.4%0.1
IN06B013 (L)1GABA224.1%0.0
IN06B013 (R)1GABA122.2%0.0
i2 MN (R)1ACh122.2%0.0
hg4 MN (R)1unc112.1%0.0
IN12A012 (R)1GABA101.9%0.0
IN17A033 (R)1ACh101.9%0.0
vMS16 (R)1unc81.5%0.0
IN12A044 (R)1ACh71.3%0.0
IN11B013 (R)2GABA71.3%0.4
dMS2 (R)3ACh71.3%0.5
hg1 MN (R)1ACh61.1%0.0
IN03B005 (R)1unc61.1%0.0
IN11A019 (R)2ACh61.1%0.7
IN11B024_c (R)1GABA50.9%0.0
IN11A021 (R)1ACh50.9%0.0
IN17A027 (R)1ACh50.9%0.0
IN03A011 (R)1ACh50.9%0.0
IN03B008 (R)1unc50.9%0.0
IN11B004 (L)1GABA50.9%0.0
hg3 MN (R)1GABA40.7%0.0
vMS11 (R)1Glu40.7%0.0
IN08B051_d (R)1ACh40.7%0.0
IN17A039 (R)1ACh40.7%0.0
IN17A035 (R)1ACh40.7%0.0
IN06B036 (L)1GABA30.6%0.0
IN06A016 (L)1GABA30.6%0.0
AN17B016 (L)1GABA30.6%0.0
IN16B069 (R)2Glu30.6%0.3
IN08B003 (L)1GABA20.4%0.0
IN11A028 (R)1ACh20.4%0.0
IN11B023 (R)1GABA20.4%0.0
IN17A034 (R)1ACh20.4%0.0
IN01A024 (L)1ACh20.4%0.0
IN03B024 (R)1GABA20.4%0.0
IN11B004 (R)1GABA20.4%0.0
SNpp372ACh20.4%0.0
IN06B047 (L)2GABA20.4%0.0
IN06B063 (R)2GABA20.4%0.0
IN17A059,IN17A063 (R)2ACh20.4%0.0
IN06B050 (L)1GABA10.2%0.0
IN16B068_c (R)1Glu10.2%0.0
INXXX083 (R)1ACh10.2%0.0
IN06B081 (L)1GABA10.2%0.0
IN08A011 (R)1Glu10.2%0.0
IN16B099 (R)1Glu10.2%0.0
IN07B084 (R)1ACh10.2%0.0
IN12A050_a (R)1ACh10.2%0.0
IN12A035 (R)1ACh10.2%0.0
IN06A032 (R)1GABA10.2%0.0
IN06A033 (R)1GABA10.2%0.0
IN03B063 (R)1GABA10.2%0.0
IN11A027_a (L)1ACh10.2%0.0
IN11A037_a (R)1ACh10.2%0.0
IN16B063 (R)1Glu10.2%0.0
IN07B086 (L)1ACh10.2%0.0
IN08B051_e (R)1ACh10.2%0.0
IN06B038 (L)1GABA10.2%0.0
IN06B043 (L)1GABA10.2%0.0
IN17A064 (R)1ACh10.2%0.0
IN03B053 (R)1GABA10.2%0.0
IN07B039 (L)1ACh10.2%0.0
TN1a_g (L)1ACh10.2%0.0
IN03A045 (R)1ACh10.2%0.0
IN17A048 (R)1ACh10.2%0.0
ps2 MN (R)1unc10.2%0.0
IN12B014 (L)1GABA10.2%0.0
IN12A006 (R)1ACh10.2%0.0
IN12A009 (R)1ACh10.2%0.0
IN04B006 (R)1ACh10.2%0.0
IN19B008 (L)1ACh10.2%0.0
AN18B004 (L)1ACh10.2%0.0
AN08B074 (R)1ACh10.2%0.0
AN17B016 (R)1GABA10.2%0.0