Male CNS – Cell Type Explorer

IN16B068_b[T2]{16B} ⧉

2
Neurons
Right: 1 | Left: 1
log ratio : 0.00
2,422
Synapses
Right: 1,006 | Left: 1,416
log ratio : 0.49
3,296
Connections
Right: 1,339 | Left: 1,957
log ratio : 0.55
Glu (80.8% CL)
Neurotransmitter
1,211
Synapses per Neuron
Right: 1,006 | Left: 1,416
log ratio : 0.49
1,648
Connections per Neuron
Right: 1,339 | Left: 1,957
log ratio : 0.55

Neuron Visualization ⧉ ⤓

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

Download neurons

Downloads one file per neuron that this page sends to the viewer (the neurons of this type plus any partners ticked in the tables below), packed into a single zip file. Neurons without a file are listed in missing_body_ids.txt inside the zip.

Format

screenshot of the 'copy URL' button in Neuroglancer Changes made inside Neuroglancer are invisible to the Cell Type Explorer. To download exactly the neurons selected in Neuroglancer, copy the URL from Neuroglancer and paste it here:

ROI Innervation (6 ROIs)

ROI Name∑
In
%
In
log
ratio
∑
Out
%
Out
WTct(UTct-T2)1,43675.5%-1.6246689.8%
Ov30115.8%-3.15346.6%
VNC-unspecified1075.6%-3.42101.9%
IntTct351.8%-3.5430.6%
LegNp(T2)191.0%-1.6661.2%
ADMN50.3%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
IN16B068_b
%
In
CV
SNpp094ACh11312.3%0.1
IN03A0032ACh95.510.4%0.0
IN12A0024ACh83.59.1%0.2
IN02A0106Glu74.58.1%0.9
SApp049ACh495.3%0.8
IN17A106_a2ACh32.53.5%0.0
IN17A0952ACh28.53.1%0.0
AN19B0014ACh272.9%0.5
IN06B07911GABA222.4%0.7
TN1a_g4ACh222.4%0.5
IN11B0197GABA212.3%0.2
SNpp335ACh20.52.2%0.5
IN17A0994ACh202.2%0.7
dMS52ACh161.7%0.0
IN12A0304ACh151.6%0.5
SNta068ACh14.51.6%0.7
IN17A1072ACh14.51.6%0.0
IN11B021_c4GABA13.51.5%0.0
INXXX0632GABA131.4%0.0
SNpp312ACh121.3%0.1
SNta054ACh10.51.1%0.5
IN18B0523ACh9.51.0%0.5
IN17A1122ACh91.0%0.0
IN03B0589GABA91.0%0.5
IN11B021_e3GABA7.50.8%0.3
IN06B0331GABA70.8%0.0
AN18B0042ACh70.8%0.0
TN1a_h2ACh5.50.6%0.0
IN01A0172ACh50.5%0.0
IN19B0072ACh50.5%0.0
IN19B0913ACh4.50.5%0.3
IN08A0116Glu4.50.5%0.1
IN17A106_b1ACh40.4%0.0
IN07B0982ACh40.4%0.0
IN13B1042GABA40.4%0.0
IN16B0694Glu40.4%0.3
IN19B0894ACh3.50.4%0.3
IN18B0432ACh3.50.4%0.0
IN17A0644ACh3.50.4%0.1
AN06B0312GABA3.50.4%0.0
IN06A0371GABA30.3%0.0
SNpp132ACh30.3%0.7
SNpp302ACh30.3%0.0
IN05B0082GABA30.3%0.0
IN18B0092ACh30.3%0.0
IN19B0082ACh30.3%0.0
SNpp381ACh2.50.3%0.0
IN05B0661GABA2.50.3%0.0
SNpp322ACh2.50.3%0.2
IN11B021_b3GABA2.50.3%0.3
IN11B0143GABA2.50.3%0.0
TN1a_i2ACh2.50.3%0.0
AN27X0081HA20.2%0.0
SNpp042ACh20.2%0.0
SNta123ACh20.2%0.4
IN16B068_a2Glu20.2%0.0
IN13B0082GABA20.2%0.0
IN07B0991ACh1.50.2%0.0
SNxx281ACh1.50.2%0.0
IN08B0781ACh1.50.2%0.0
DNge0291Glu1.50.2%0.0
SNta02,SNta092ACh1.50.2%0.3
IN17A0782ACh1.50.2%0.0
DNd032Glu1.50.2%0.0
IN17A0342ACh1.50.2%0.0
vMS113Glu1.50.2%0.0
dMS23ACh1.50.2%0.0
IN06A0052GABA1.50.2%0.0
IN18B0491ACh10.1%0.0
IN06B0381GABA10.1%0.0
IN06B0711GABA10.1%0.0
SNta071ACh10.1%0.0
IN13A0221GABA10.1%0.0
IN12A0092ACh10.1%0.0
IN11A0192ACh10.1%0.0
IN11B021_d2GABA10.1%0.0
IN06B0132GABA10.1%0.0
IN12A0062ACh10.1%0.0
vMS162unc10.1%0.0
IN19B0022ACh10.1%0.0
IN01A0111ACh0.50.1%0.0
IN16B0621Glu0.50.1%0.0
IN06B0661GABA0.50.1%0.0
IN19A0571GABA0.50.1%0.0
IN18B0201ACh0.50.1%0.0
IN16B0991Glu0.50.1%0.0
IN17A1141ACh0.50.1%0.0
IN06B0831GABA0.50.1%0.0
IN00A057 (M)1GABA0.50.1%0.0
IN06B0741GABA0.50.1%0.0
IN17A0971ACh0.50.1%0.0
IN17A1161ACh0.50.1%0.0
IN17A0851ACh0.50.1%0.0
IN06A0401GABA0.50.1%0.0
IN06B0701GABA0.50.1%0.0
IN16B068_c1Glu0.50.1%0.0
IN11A0251ACh0.50.1%0.0
IN27X0031unc0.50.1%0.0
IN17A0901ACh0.50.1%0.0
IN08B0681ACh0.50.1%0.0
IN11B0131GABA0.50.1%0.0
IN19B0821ACh0.50.1%0.0
IN16B0721Glu0.50.1%0.0
IN04B0551ACh0.50.1%0.0
IN11A0041ACh0.50.1%0.0
IN18B0351ACh0.50.1%0.0
IN17B0151GABA0.50.1%0.0
AN17B0021GABA0.50.1%0.0
SApp141ACh0.50.1%0.0
AN17A0031ACh0.50.1%0.0
DNge150 (M)1unc0.50.1%0.0
DNge0491ACh0.50.1%0.0
IN06B0471GABA0.50.1%0.0
IN11B021_a1GABA0.50.1%0.0
IN03B0741GABA0.50.1%0.0
IN17A0741ACh0.50.1%0.0
IN11A0211ACh0.50.1%0.0
IN19B0771ACh0.50.1%0.0
SNpp061ACh0.50.1%0.0
IN19B0941ACh0.50.1%0.0
IN18B0421ACh0.50.1%0.0
IN18B0341ACh0.50.1%0.0
IN17A0391ACh0.50.1%0.0
IN17A0291ACh0.50.1%0.0
IN03B0361GABA0.50.1%0.0
INXXX0081unc0.50.1%0.0
INXXX0441GABA0.50.1%0.0
INXXX0951ACh0.50.1%0.0
AN05B0691GABA0.50.1%0.0
AN09B0291ACh0.50.1%0.0
AN06B0891GABA0.50.1%0.0
AN02A0011Glu0.50.1%0.0

Outputs

downstream
partner
#NTconns
IN16B068_b
%
Out
CV
IN19B0082ACh145.520.0%0.0
MNwm352unc119.516.4%0.0
dMS210ACh608.2%0.9
ps2 MN2Glu476.4%0.0
tp1 MN2Glu38.55.3%0.0
IN06B0616GABA34.54.7%0.6
IN06B0132GABA334.5%0.0
b2 MN2Glu19.52.7%0.0
IN17A0332ACh16.52.3%0.0
IN17A0272ACh162.2%0.0
IN17A0495ACh152.1%0.2
IN03B05810GABA152.1%0.7
IN03B0534GABA91.2%0.3
IN17A0392ACh91.2%0.0
hg4 MN2unc6.50.9%0.0
IN11A0012GABA60.8%0.0
IN11B0195GABA50.7%0.5
IN11B024_b2GABA4.50.6%0.1
IN11A0193ACh4.50.6%0.0
IN17A059,IN17A0633ACh4.50.6%0.3
hg3 MN2Glu40.5%0.0
IN17A0342ACh40.5%0.0
IN16B0162Glu40.5%0.0
IN11B024_c3GABA3.50.5%0.1
IN08B0032GABA3.50.5%0.0
IN01A0312ACh3.50.5%0.0
IN06B0432GABA3.50.5%0.0
dMS52ACh30.4%0.0
IN06B0476GABA30.4%0.0
IN12A0092ACh30.4%0.0
IN17B0152GABA30.4%0.0
vMS113Glu30.4%0.2
IN17A0551ACh2.50.3%0.0
IN18B0272ACh2.50.3%0.0
IN16B068_a2Glu2.50.3%0.0
IN17A0852ACh2.50.3%0.0
INXXX2162ACh2.50.3%0.0
IN10B0061ACh20.3%0.0
IN08B1043ACh20.3%0.4
IN19B0902ACh20.3%0.0
IN16B0693Glu20.3%0.2
IN17A1123ACh20.3%0.0
IN17A0951ACh1.50.2%0.0
IN03A0031ACh1.50.2%0.0
IN11A0282ACh1.50.2%0.3
IN16B068_c2Glu1.50.2%0.0
IN08A0112Glu1.50.2%0.0
IN19B0952ACh1.50.2%0.0
IN11B0042GABA1.50.2%0.0
IN12A0442ACh1.50.2%0.0
IN06B0633GABA1.50.2%0.0
IN12A0023ACh1.50.2%0.0
AN08B0473ACh1.50.2%0.0
IN17B0041GABA10.1%0.0
IN06B0691GABA10.1%0.0
IN19B0771ACh10.1%0.0
vMS12_a1ACh10.1%0.0
IN12A0181ACh10.1%0.0
dPR11ACh10.1%0.0
IN02A0102Glu10.1%0.0
IN00A022 (M)1GABA10.1%0.0
vMS12_b1ACh10.1%0.0
AN08B0612ACh10.1%0.0
IN08A0432Glu10.1%0.0
IN17A1072ACh10.1%0.0
vPR62ACh10.1%0.0
IN11B0132GABA10.1%0.0
IN16B0722Glu10.1%0.0
IN18B0352ACh10.1%0.0
IN17A0231ACh0.50.1%0.0
IN03B0461GABA0.50.1%0.0
IN06B0521GABA0.50.1%0.0
IN03B0591GABA0.50.1%0.0
IN17A1141ACh0.50.1%0.0
IN06B0791GABA0.50.1%0.0
IN05B0731GABA0.50.1%0.0
IN11B021_c1GABA0.50.1%0.0
IN19B0911ACh0.50.1%0.0
SNpp131ACh0.50.1%0.0
IN17A106_b1ACh0.50.1%0.0
IN17A0721ACh0.50.1%0.0
IN06B0501GABA0.50.1%0.0
vMS12_e1ACh0.50.1%0.0
IN17A0991ACh0.50.1%0.0
IN06B0711GABA0.50.1%0.0
IN18B0341ACh0.50.1%0.0
IN17A0571ACh0.50.1%0.0
IN19B0311ACh0.50.1%0.0
IN13A0221GABA0.50.1%0.0
IN10B0231ACh0.50.1%0.0
TN1a_g1ACh0.50.1%0.0
AN10B0151ACh0.50.1%0.0
ps1 MN1unc0.50.1%0.0
IN19A0031GABA0.50.1%0.0
IN11A0101ACh0.50.1%0.0
IN17A071,IN17A0811ACh0.50.1%0.0
SNpp321ACh0.50.1%0.0
INXXX2011ACh0.50.1%0.0
IN03A0441ACh0.50.1%0.0
IN11B021_d1GABA0.50.1%0.0
IN03B0851GABA0.50.1%0.0
IN03B0651GABA0.50.1%0.0
IN18B0521ACh0.50.1%0.0
IN06B0361GABA0.50.1%0.0
IN12A0301ACh0.50.1%0.0
IN01A0241ACh0.50.1%0.0
IN17A0601Glu0.50.1%0.0
IN08B0351ACh0.50.1%0.0
IN17A0351ACh0.50.1%0.0
IN00A039 (M)1GABA0.50.1%0.0
IN27X0071unc0.50.1%0.0
AN05B0961ACh0.50.1%0.0
AN18B0041ACh0.50.1%0.0
vMS161unc0.50.1%0.0
AN17B0051GABA0.50.1%0.0
DNp601ACh0.50.1%0.0
AN02A0011Glu0.50.1%0.0