Male CNS – Cell Type Explorer

IN13A056[T1]{13A}

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
759
Total Synapses
Right: 266 | Left: 493
log ratio : 0.89
379.5
Mean Synapses
Right: 266 | Left: 493
log ratio : 0.89
GABA(87.6% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (3 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
LegNp(T1)49898.2%-0.9925199.6%
VNC-unspecified81.6%-3.0010.4%
mVAC(T1)10.2%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
IN13A056
%
In
CV
IN21A0112Glu18.59.0%0.0
IN03A0946ACh146.8%0.6
SNxx301ACh12.56.1%0.0
IN03A0466ACh12.56.1%0.6
IN01A0562ACh12.56.1%0.0
IN14A0264Glu83.9%0.2
IN21A0072Glu73.4%0.0
IN09A0122GABA6.53.2%0.0
IN09A0142GABA6.53.2%0.0
IN13A0031GABA62.9%0.0
IN01A0672ACh5.52.7%0.0
IN03B0152GABA5.52.7%0.0
IN21A0202ACh3.51.7%0.0
DNge0801ACh31.5%0.0
ANXXX0413GABA31.5%0.3
IN01A0341ACh2.51.2%0.0
IN16B075_h1Glu2.51.2%0.0
IN13A0081GABA2.51.2%0.0
AN00A002 (M)1GABA2.51.2%0.0
IN14A0282Glu2.51.2%0.0
IN01A0121ACh21.0%0.0
IN14A0011GABA21.0%0.0
IN12A0562ACh21.0%0.5
AN10B0092ACh21.0%0.0
IN08A0022Glu21.0%0.0
IN16B0803Glu21.0%0.2
IN09A0482GABA21.0%0.0
IN01A0181ACh1.50.7%0.0
IN12A0411ACh1.50.7%0.0
IN17A0201ACh1.50.7%0.0
IN20A.22A0071ACh1.50.7%0.0
IN01A0361ACh1.50.7%0.0
AN05B0101GABA1.50.7%0.0
AN17A0031ACh1.50.7%0.0
AN12B0011GABA1.50.7%0.0
DNg371ACh1.50.7%0.0
INXXX4712GABA1.50.7%0.0
IN16B0182GABA1.50.7%0.0
IN09A0471GABA10.5%0.0
IN13B0761GABA10.5%0.0
IN19A1031GABA10.5%0.0
IN13B0011GABA10.5%0.0
IN16B0501Glu10.5%0.0
IN16B0551Glu10.5%0.0
IN14A0171Glu10.5%0.0
IN23B0371ACh10.5%0.0
IN23B0241ACh10.5%0.0
IN17A0251ACh10.5%0.0
INXXX0031GABA10.5%0.0
ANXXX0861ACh10.5%0.0
AN17A0151ACh10.5%0.0
INXXX0452unc10.5%0.0
IN03A0062ACh10.5%0.0
IN09A0502GABA10.5%0.0
IN09A0742GABA10.5%0.0
IN09A0961GABA0.50.2%0.0
IN16B0571Glu0.50.2%0.0
IN04B0261ACh0.50.2%0.0
IN13A0431GABA0.50.2%0.0
IN14A0061Glu0.50.2%0.0
IN03A0071ACh0.50.2%0.0
IN16B0301Glu0.50.2%0.0
IN19A1021GABA0.50.2%0.0
SNpp391ACh0.50.2%0.0
IN13A0551GABA0.50.2%0.0
IN03A062_b1ACh0.50.2%0.0
IN01A0301ACh0.50.2%0.0
IN21A0101ACh0.50.2%0.0
IN19A0151GABA0.50.2%0.0
INXXX4641ACh0.50.2%0.0
INXXX0041GABA0.50.2%0.0
IN01B0221GABA0.50.2%0.0
IN16B0291Glu0.50.2%0.0
IN20A.22A0891ACh0.50.2%0.0
IN04B0941ACh0.50.2%0.0
IN16B0321Glu0.50.2%0.0
IN16B0201Glu0.50.2%0.0
IN07B0201ACh0.50.2%0.0
IN09A0061GABA0.50.2%0.0
IN01B0451GABA0.50.2%0.0
SNpp191ACh0.50.2%0.0
IN16B0371Glu0.50.2%0.0
IN01A0251ACh0.50.2%0.0
IN21A0221ACh0.50.2%0.0
IN17A0411Glu0.50.2%0.0
INXXX1941Glu0.50.2%0.0
IN14A0101Glu0.50.2%0.0
Sternotrochanter MN1unc0.50.2%0.0
vMS171unc0.50.2%0.0
IN17B0101GABA0.50.2%0.0
INXXX4681ACh0.50.2%0.0
IN17A0221ACh0.50.2%0.0
IN19A0071GABA0.50.2%0.0
IN13A0011GABA0.50.2%0.0
ANXXX1311ACh0.50.2%0.0
DNge0501ACh0.50.2%0.0

Outputs

downstream
partner
#NTconns
IN13A056
%
Out
CV
Sternotrochanter MN4unc27.519.2%0.9
IN06B0294GABA1913.2%0.3
Tr extensor MN3unc1812.5%0.5
IN19A0152GABA117.7%0.0
Tergotr. MN4unc5.53.8%0.4
IN01A0252ACh53.5%0.0
IN19A0082GABA4.53.1%0.0
IN04B0915ACh4.53.1%0.4
IN09A0694GABA3.52.4%0.1
IN20A.22A0041ACh2.51.7%0.0
IN20A.22A0012ACh2.51.7%0.0
IN21A0151Glu21.4%0.0
IN14A0101Glu21.4%0.0
IN20A.22A0072ACh21.4%0.0
IN13B0641GABA1.51.0%0.0
IN04B0502ACh1.51.0%0.3
IN13A0432GABA1.51.0%0.0
IN13A0712GABA1.51.0%0.0
IN20A.22A0051ACh10.7%0.0
AN07B0111ACh10.7%0.0
IN20A.22A0761ACh10.7%0.0
IN21A1031Glu10.7%0.0
IN08A0101Glu10.7%0.0
IN01A0151ACh10.7%0.0
ANXXX1911ACh10.7%0.0
Acc. ti flexor MN2unc10.7%0.0
IN01A0382ACh10.7%0.0
IN19A0022GABA10.7%0.0
IN09A0711GABA0.50.3%0.0
IN13B0811GABA0.50.3%0.0
IN19A1031GABA0.50.3%0.0
IN14A0351Glu0.50.3%0.0
IN13A0551GABA0.50.3%0.0
IN16B0551Glu0.50.3%0.0
IN08B0371ACh0.50.3%0.0
IN04B0731ACh0.50.3%0.0
IN14B0101Glu0.50.3%0.0
IN13A0051GABA0.50.3%0.0
IN21A0071Glu0.50.3%0.0
IN10B0011ACh0.50.3%0.0
IN07B0071Glu0.50.3%0.0
IN19A0061ACh0.50.3%0.0
AN12B0111GABA0.50.3%0.0
IN21A0371Glu0.50.3%0.0
IN04B0721ACh0.50.3%0.0
IN04B0311ACh0.50.3%0.0
IN03A062_b1ACh0.50.3%0.0
IN16B0201Glu0.50.3%0.0
Tr flexor MN1unc0.50.3%0.0
IN21A0791Glu0.50.3%0.0
IN14A0281Glu0.50.3%0.0
IN04B0411ACh0.50.3%0.0
IN12B0201GABA0.50.3%0.0
IN14A0141Glu0.50.3%0.0
IN03A062_c1ACh0.50.3%0.0
IN14B0051Glu0.50.3%0.0
IN14A0111Glu0.50.3%0.0
IN14A0051Glu0.50.3%0.0
IN09A0031GABA0.50.3%0.0
IN00A001 (M)1unc0.50.3%0.0
INXXX0361ACh0.50.3%0.0
AN04B0011ACh0.50.3%0.0
ANXXX0411GABA0.50.3%0.0
AN12B0191GABA0.50.3%0.0