Male CNS – Cell Type Explorer

IN11B024_c(R)[T2]{11B}

4
Total Neurons
Right: 2 | Left: 2
log ratio : 0.00
3,128
Total Synapses
Post: 2,376 | Pre: 752
log ratio : -1.66
1,564
Mean Synapses
Post: 1,188 | Pre: 376
log ratio : -1.66
GABA(87.7% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (6 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
WTct(UTct-T2)(R)1,89479.7%-1.5465286.7%
WTct(UTct-T2)(L)2299.6%-1.69719.4%
IntTct1375.8%-2.29283.7%
LTct944.0%-inf00.0%
VNC-unspecified190.8%-inf00.0%
ADMN(R)30.1%-1.5810.1%

Connectivity

Inputs

upstream
partner
#NTconns
IN11B024_c
%
In
CV
dMS2 (R)9ACh27624.3%0.6
vMS12_a (R)3ACh1079.4%0.2
IN06B047 (L)6GABA413.6%0.9
vMS12_a (L)3ACh413.6%0.1
dMS5 (L)1ACh373.3%0.0
dMS5 (R)1ACh363.2%0.0
vMS12_b (R)1ACh32.52.9%0.0
vMS12_c (R)2ACh322.8%0.1
dMS2 (L)8ACh312.7%0.8
TN1a_a (R)1ACh272.4%0.0
TN1a_e (L)1ACh242.1%0.0
TN1a_f (L)2ACh23.52.1%0.5
IN11B004 (R)1GABA21.51.9%0.0
TN1a_a (L)1ACh211.9%0.0
TN1a_f (R)2ACh201.8%0.1
IN06B036 (L)2GABA19.51.7%0.2
TN1a_e (R)1ACh18.51.6%0.0
IN11B004 (L)1GABA17.51.5%0.0
vMS12_d (R)2ACh16.51.5%0.2
TN1a_b (L)1ACh13.51.2%0.0
vMS16 (R)1unc131.1%0.0
vPR6 (L)4ACh12.51.1%0.5
vMS12_d (L)2ACh121.1%0.7
IN03B024 (R)1GABA11.51.0%0.0
vMS12_c (L)2ACh111.0%0.0
TN1a_b (R)1ACh10.50.9%0.0
TN1a_g (L)2ACh100.9%0.5
AN02A001 (R)1Glu90.8%0.0
vMS12_b (L)1ACh80.7%0.0
DNge079 (R)1GABA7.50.7%0.0
TN1a_d (R)1ACh70.6%0.0
TN1a_c (R)1ACh6.50.6%0.0
vPR6 (R)3ACh60.5%1.1
TN1a_d (L)1ACh5.50.5%0.0
TN1a_g (R)2ACh5.50.5%0.8
AN02A001 (L)1Glu5.50.5%0.0
IN16B068_a (R)1Glu4.50.4%0.0
ANXXX106 (R)1GABA4.50.4%0.0
TN1a_c (L)1ACh4.50.4%0.0
DNp36 (R)1Glu4.50.4%0.0
IN06B036 (R)2GABA40.4%0.8
IN17B004 (R)2GABA40.4%0.2
IN11B024_b (R)2GABA40.4%0.0
IN06B070 (L)1GABA30.3%0.0
IN17B001 (R)1GABA30.3%0.0
IN17B001 (L)1GABA30.3%0.0
IN03B024 (L)1GABA30.3%0.0
vMS12_e (R)1ACh30.3%0.0
AN19B079 (L)2ACh30.3%0.3
IN16B069 (R)1Glu30.3%0.0
IN00A047 (M)3GABA30.3%0.7
IN17A055 (R)1ACh2.50.2%0.0
IN11B024_c (R)2GABA2.50.2%0.6
IN06B066 (R)2GABA2.50.2%0.2
IN19B047 (L)1ACh2.50.2%0.0
IN17A045 (L)1ACh20.2%0.0
IN11A021 (R)2ACh20.2%0.5
IN06B047 (R)2GABA20.2%0.5
vMS11 (R)3Glu20.2%0.4
vPR9_a (M)3GABA20.2%0.4
IN06B071 (L)3GABA20.2%0.4
IN06B083 (L)1GABA1.50.1%0.0
vMS16 (L)1unc1.50.1%0.0
IN17A071, IN17A081 (R)1ACh1.50.1%0.0
IN06B087 (R)1GABA1.50.1%0.0
hg4 MN (R)1unc1.50.1%0.0
IN12A044 (R)2ACh1.50.1%0.3
TN1a_i (R)1ACh1.50.1%0.0
AN27X008 (R)1HA1.50.1%0.0
IN06B043 (L)1GABA1.50.1%0.0
IN12A042 (R)3ACh1.50.1%0.0
IN00A044 (M)1GABA10.1%0.0
vMS11 (L)1Glu10.1%0.0
IN08B003 (R)1GABA10.1%0.0
IN02A004 (R)1Glu10.1%0.0
AN03B039 (R)1GABA10.1%0.0
AN27X009 (L)1ACh10.1%0.0
IN17A110 (R)1ACh10.1%0.0
IN16B068_b (R)1Glu10.1%0.0
IN17A034 (R)1ACh10.1%0.0
DNg108 (L)1GABA10.1%0.0
IN06B066 (L)2GABA10.1%0.0
IN06B043 (R)1GABA10.1%0.0
IN08B051_d (R)2ACh10.1%0.0
IN00A056 (M)2GABA10.1%0.0
IN11B024_c (L)2GABA10.1%0.0
IN13B104 (R)1GABA10.1%0.0
IN11B025 (R)2GABA10.1%0.0
IN03B058 (R)2GABA10.1%0.0
IN12A030 (R)1ACh0.50.0%0.0
IN11B013 (R)1GABA0.50.0%0.0
IN06A039 (L)1GABA0.50.0%0.0
IN08B035 (R)1ACh0.50.0%0.0
IN19B013 (L)1ACh0.50.0%0.0
IN11B023 (R)1GABA0.50.0%0.0
IN12A059_c (L)1ACh0.50.0%0.0
IN17A108 (R)1ACh0.50.0%0.0
IN11B025 (L)1GABA0.50.0%0.0
IN03B069 (R)1GABA0.50.0%0.0
IN12A054 (R)1ACh0.50.0%0.0
IN06A086 (L)1GABA0.50.0%0.0
IN12A044 (L)1ACh0.50.0%0.0
IN08B051_e (R)1ACh0.50.0%0.0
vMS12_e (L)1ACh0.50.0%0.0
IN17A098 (R)1ACh0.50.0%0.0
IN06B077 (L)1GABA0.50.0%0.0
IN08B068 (R)1ACh0.50.0%0.0
IN08B051_b (R)1ACh0.50.0%0.0
TN1a_i (L)1ACh0.50.0%0.0
IN08B035 (L)1ACh0.50.0%0.0
IN17A039 (R)1ACh0.50.0%0.0
IN06A003 (L)1GABA0.50.0%0.0
IN18B035 (L)1ACh0.50.0%0.0
vPR9_c (M)1GABA0.50.0%0.0
IN13B008 (L)1GABA0.50.0%0.0
IN06B013 (L)1GABA0.50.0%0.0
IN19B007 (L)1ACh0.50.0%0.0
MNwm35 (R)1unc0.50.0%0.0
AN19B063 (L)1ACh0.50.0%0.0
AN08B103 (R)1ACh0.50.0%0.0
AN23B002 (R)1ACh0.50.0%0.0
AN23B002 (L)1ACh0.50.0%0.0
AN19B001 (L)1ACh0.50.0%0.0
dMS9 (L)1ACh0.50.0%0.0
DNpe010 (R)1Glu0.50.0%0.0
DNge150 (M)1unc0.50.0%0.0
DNbe005 (L)1Glu0.50.0%0.0
DNd03 (R)1Glu0.50.0%0.0
DNge107 (L)1GABA0.50.0%0.0
DNg108 (R)1GABA0.50.0%0.0
IN06B079 (L)1GABA0.50.0%0.0
hg3 MN (R)1GABA0.50.0%0.0
IN11B001 (R)1ACh0.50.0%0.0
dMS9 (R)1ACh0.50.0%0.0
IN19B097 (L)1ACh0.50.0%0.0
IN11B024_a (R)1GABA0.50.0%0.0
IN06B052 (L)1GABA0.50.0%0.0
IN19B089 (L)1ACh0.50.0%0.0
IN06B071 (R)1GABA0.50.0%0.0
IN13B104 (L)1GABA0.50.0%0.0
IN06B035 (L)1GABA0.50.0%0.0
dPR1 (L)1ACh0.50.0%0.0
IN11A001 (R)1GABA0.50.0%0.0
AN27X008 (L)1HA0.50.0%0.0
AN08B074 (R)1ACh0.50.0%0.0
AN27X003 (R)1unc0.50.0%0.0
DNg82 (R)1ACh0.50.0%0.0

Outputs

downstream
partner
#NTconns
IN11B024_c
%
Out
CV
dMS2 (R)10ACh36033.9%0.9
hg1 MN (R)1ACh11410.7%0.0
dMS2 (L)6ACh686.4%0.8
MNwm35 (R)1unc62.55.9%0.0
vMS12_a (R)3ACh40.53.8%0.2
IN06B066 (L)6GABA31.53.0%0.5
vMS12_c (R)2ACh30.52.9%0.2
IN06B043 (L)4GABA28.52.7%0.9
IN06B036 (L)2GABA26.52.5%0.2
vMS12_d (R)2ACh262.4%0.2
IN11B004 (L)1GABA22.52.1%0.0
vMS12_a (L)3ACh191.8%0.3
IN11B004 (R)1GABA171.6%0.0
vMS12_e (R)1ACh161.5%0.0
vMS12_d (L)2ACh161.5%0.0
IN12A042 (R)4ACh14.51.4%0.6
vMS12_b (R)1ACh13.51.3%0.0
IN06B036 (R)3GABA13.51.3%0.4
i2 MN (R)1ACh11.51.1%0.0
vMS12_c (L)2ACh100.9%0.2
IN06B066 (R)4GABA9.50.9%0.6
i1 MN (R)1ACh90.8%0.0
IN06B043 (R)2GABA80.8%0.6
MNwm35 (L)1unc70.7%0.0
hg1 MN (L)1ACh6.50.6%0.0
IN11B024_b (R)2GABA5.50.5%0.5
AN08B061 (R)3ACh50.5%0.4
vMS12_b (L)1ACh4.50.4%0.0
vMS12_e (L)1ACh4.50.4%0.0
hg4 MN (R)1unc4.50.4%0.0
vPR6 (R)3ACh4.50.4%0.5
AN08B035 (R)1ACh3.50.3%0.0
IN12A042 (L)3ACh30.3%0.4
IN11B024_c (R)2GABA2.50.2%0.6
IN08B051_d (R)1ACh2.50.2%0.0
IN11B025 (R)1GABA20.2%0.0
AN08B103 (R)1ACh20.2%0.0
IN06B061 (L)1GABA20.2%0.0
IN11B024_a (R)1GABA20.2%0.0
IN17A055 (R)1ACh1.50.1%0.0
IN12A044 (L)2ACh1.50.1%0.3
IN12A044 (R)2ACh1.50.1%0.3
IN06B047 (L)3GABA1.50.1%0.0
AN08B097 (R)2ACh1.50.1%0.3
vMS11 (R)1Glu10.1%0.0
IN11B024_a (L)1GABA10.1%0.0
IN08B051_e (R)1ACh10.1%0.0
IN00A054 (M)1GABA10.1%0.0
IN16B068_a (R)1Glu10.1%0.0
IN06B053 (L)1GABA10.1%0.0
IN06B052 (L)1GABA10.1%0.0
IN03B058 (R)1GABA0.50.0%0.0
IN11B013 (R)1GABA0.50.0%0.0
IN11B015 (L)1GABA0.50.0%0.0
vPR9_a (M)1GABA0.50.0%0.0
IN08B035 (R)1ACh0.50.0%0.0
IN11B024_b (L)1GABA0.50.0%0.0
dMS9 (R)1ACh0.50.0%0.0
IN06B081 (R)1GABA0.50.0%0.0
IN11B022_c (R)1GABA0.50.0%0.0
IN08B104 (R)1ACh0.50.0%0.0
IN00A057 (M)1GABA0.50.0%0.0
IN05B057 (L)1GABA0.50.0%0.0
IN06A003 (L)1GABA0.50.0%0.0
IN08B068 (L)1ACh0.50.0%0.0
TN1a_f (R)1ACh0.50.0%0.0
vPR9_c (M)1GABA0.50.0%0.0
IN03B024 (R)1GABA0.50.0%0.0
DVMn 1a-c (R)1unc0.50.0%0.0
IN13A013 (R)1GABA0.50.0%0.0
i1 MN (L)1ACh0.50.0%0.0
hg4 MN (L)1unc0.50.0%0.0
INXXX011 (R)1ACh0.50.0%0.0
IN11A001 (R)1GABA0.50.0%0.0
IN11A001 (L)1GABA0.50.0%0.0
AN08B061 (L)1ACh0.50.0%0.0
AN17B005 (R)1GABA0.50.0%0.0
IN16B099 (R)1Glu0.50.0%0.0
IN17A110 (R)1ACh0.50.0%0.0
IN00A047 (M)1GABA0.50.0%0.0
IN02A040 (R)1Glu0.50.0%0.0
IN08B051_c (L)1ACh0.50.0%0.0
IN03B046 (R)1GABA0.50.0%0.0
IN19B008 (R)1ACh0.50.0%0.0
DVMn 1a-c (L)1unc0.50.0%0.0
i2 MN (L)1ACh0.50.0%0.0
AN08B010 (L)1ACh0.50.0%0.0