Male CNS – Cell Type Explorer

IN11B024_b(L)[T2]{11B}

4
Total Neurons
Right: 2 | Left: 2
log ratio : 0.00
3,393
Total Synapses
Post: 2,747 | Pre: 646
log ratio : -2.09
1,696.5
Mean Synapses
Post: 1,373.5 | Pre: 323
log ratio : -2.09
GABA(89.3% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (4 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
WTct(UTct-T2)(L)2,02173.6%-1.8655786.2%
WTct(UTct-T2)(R)43916.0%-2.517711.9%
IntTct1585.8%-4.1391.4%
LTct1294.7%-5.4330.5%

Connectivity

Inputs

upstream
partner
#NTconns
IN11B024_b
%
In
CV
dMS2 (L)10ACh16212.2%0.7
vMS12_a (L)3ACh1209.0%0.3
vMS12_c (L)2ACh62.54.7%0.1
dMS5 (L)1ACh59.54.5%0.0
vMS12_b (L)1ACh523.9%0.0
TN1a_f (L)2ACh503.8%0.0
IN06B047 (R)6GABA493.7%0.9
TN1a_f (R)2ACh483.6%0.0
vMS12_a (R)3ACh433.2%0.1
vMS12_d (L)2ACh413.1%0.3
IN11B004 (L)1GABA36.52.7%0.0
dMS5 (R)1ACh352.6%0.0
IN06B036 (R)3GABA33.52.5%0.2
TN1a_a (R)1ACh312.3%0.0
TN1a_e (L)1ACh26.52.0%0.0
TN1a_e (R)1ACh251.9%0.0
vPR6 (L)4ACh22.51.7%0.3
AN02A001 (L)1Glu221.7%0.0
TN1a_a (L)1ACh221.7%0.0
vMS12_c (R)2ACh21.51.6%0.2
dMS2 (R)7ACh19.51.5%0.5
vPR6 (R)4ACh18.51.4%0.8
vMS12_b (R)1ACh171.3%0.0
IN11B004 (R)1GABA151.1%0.0
vMS12_d (R)2ACh151.1%0.1
TN1a_b (R)1ACh141.1%0.0
vMS16 (R)1unc13.51.0%0.0
TN1a_c (L)1ACh120.9%0.0
TN1a_b (L)1ACh120.9%0.0
TN1a_d (L)1ACh110.8%0.0
TN1a_d (R)1ACh9.50.7%0.0
TN1a_c (R)1ACh90.7%0.0
IN00A047 (M)5GABA7.50.6%1.0
IN11B024_c (L)2GABA7.50.6%0.2
IN06B036 (L)2GABA70.5%0.3
IN17A045 (L)1ACh6.50.5%0.0
AN02A001 (R)1Glu6.50.5%0.0
IN06B013 (L)1GABA50.4%0.0
IN17B004 (L)2GABA50.4%0.0
AN19B079 (R)1ACh4.50.3%0.0
IN06A024 (R)1GABA4.50.3%0.0
IN16B068_b (L)1Glu4.50.3%0.0
DNp36 (L)1Glu40.3%0.0
IN03B024 (L)1GABA40.3%0.0
IN00A044 (M)1GABA40.3%0.0
AN19B063 (R)2ACh40.3%0.5
TN1a_g (R)1ACh3.50.3%0.0
IN13B104 (R)1GABA3.50.3%0.0
IN06B013 (R)1GABA3.50.3%0.0
IN16B068_a (L)1Glu3.50.3%0.0
vMS16 (L)1unc3.50.3%0.0
DNg108 (R)1GABA30.2%0.0
IN16B069 (L)2Glu30.2%0.7
AN27X008 (R)1HA30.2%0.0
vPR9_a (M)3GABA30.2%0.7
AN27X009 (L)1ACh2.50.2%0.0
IN06B077 (L)1GABA2.50.2%0.0
IN03B024 (R)1GABA2.50.2%0.0
IN19B007 (R)1ACh2.50.2%0.0
AN17B002 (L)1GABA2.50.2%0.0
IN07B030 (R)1Glu20.2%0.0
IN11B024_b (L)2GABA20.2%0.5
IN19B047 (L)1ACh20.2%0.0
hg3 MN (R)1GABA20.2%0.0
IN12A042 (R)2ACh20.2%0.0
vMS12_e (L)1ACh20.2%0.0
TN1a_g (L)2ACh20.2%0.5
IN06B066 (R)4GABA20.2%0.0
vPR9_c (M)3GABA20.2%0.4
ANXXX002 (R)1GABA1.50.1%0.0
DNp36 (R)1Glu1.50.1%0.0
IN06A045 (R)1GABA1.50.1%0.0
IN00A032 (M)1GABA1.50.1%0.0
IN06A003 (L)2GABA1.50.1%0.3
IN06B070 (R)2GABA1.50.1%0.3
i1 MN (L)1ACh1.50.1%0.0
IN06B040 (R)1GABA1.50.1%0.0
AN27X008 (L)1HA1.50.1%0.0
IN11B025 (L)2GABA1.50.1%0.3
IN00A057 (M)3GABA1.50.1%0.0
IN06B043 (R)1GABA10.1%0.0
AN27X019 (R)1unc10.1%0.0
IN17A104 (L)1ACh10.1%0.0
IN11B025 (R)1GABA10.1%0.0
IN06B087 (L)1GABA10.1%0.0
IN12A042 (L)1ACh10.1%0.0
IN06B063 (L)1GABA10.1%0.0
IN11A011 (L)1ACh10.1%0.0
IN06B071 (R)1GABA10.1%0.0
IN06B047 (L)1GABA10.1%0.0
IN00A050 (M)1GABA10.1%0.0
IN18B039 (L)1ACh10.1%0.0
IN17A030 (R)1ACh10.1%0.0
IN17B001 (L)1GABA10.1%0.0
IN06B035 (L)1GABA10.1%0.0
IN18B032 (R)1ACh10.1%0.0
IN12A010 (L)1ACh10.1%0.0
AN17B002 (R)1GABA10.1%0.0
IN18B039 (R)1ACh10.1%0.0
IN19B090 (R)1ACh10.1%0.0
IN06B087 (R)1GABA10.1%0.0
IN03B053 (L)1GABA10.1%0.0
IN11A004 (L)1ACh10.1%0.0
hg1 MN (L)1ACh10.1%0.0
DNge079 (L)1GABA10.1%0.0
dMS9 (L)1ACh10.1%0.0
IN06B053 (R)1GABA10.1%0.0
IN12A044 (L)1ACh10.1%0.0
IN13B104 (L)1GABA10.1%0.0
vMS11 (L)2Glu10.1%0.0
IN12A044 (R)1ACh0.50.0%0.0
IN08B003 (L)1GABA0.50.0%0.0
IN12A058 (L)1ACh0.50.0%0.0
IN11B018 (L)1GABA0.50.0%0.0
IN17A071, IN17A081 (R)1ACh0.50.0%0.0
IN06B053 (L)1GABA0.50.0%0.0
IN06B070 (L)1GABA0.50.0%0.0
IN06B066 (L)1GABA0.50.0%0.0
IN11B024_c (R)1GABA0.50.0%0.0
IN03B055 (L)1GABA0.50.0%0.0
IN19B095 (R)1ACh0.50.0%0.0
IN12A059_a (R)1ACh0.50.0%0.0
IN12A059_f (L)1ACh0.50.0%0.0
IN00A056 (M)1GABA0.50.0%0.0
IN06B043 (L)1GABA0.50.0%0.0
IN08B051_c (L)1ACh0.50.0%0.0
IN06A016 (R)1GABA0.50.0%0.0
IN08B068 (R)1ACh0.50.0%0.0
IN19B047 (R)1ACh0.50.0%0.0
IN12A052_a (R)1ACh0.50.0%0.0
IN08B035 (L)1ACh0.50.0%0.0
IN11A002 (L)1ACh0.50.0%0.0
IN17A027 (L)1ACh0.50.0%0.0
IN18B035 (L)1ACh0.50.0%0.0
IN17A030 (L)1ACh0.50.0%0.0
IN14B001 (L)1GABA0.50.0%0.0
TN1a_h (L)1ACh0.50.0%0.0
IN11A001 (L)1GABA0.50.0%0.0
AN08B010 (L)1ACh0.50.0%0.0
DNge107 (R)1GABA0.50.0%0.0
AN08B047 (L)1ACh0.50.0%0.0
IN06B085 (L)1GABA0.50.0%0.0
IN06B085 (R)1GABA0.50.0%0.0
IN08A011 (R)1Glu0.50.0%0.0
IN11B013 (L)1GABA0.50.0%0.0
IN08B051_b (R)1ACh0.50.0%0.0
TN1a_i (L)1ACh0.50.0%0.0
IN19B008 (R)1ACh0.50.0%0.0
dPR1 (R)1ACh0.50.0%0.0
AN08B061 (L)1ACh0.50.0%0.0
IN17A029 (L)1ACh0.50.0%0.0

Outputs

downstream
partner
#NTconns
IN11B024_b
%
Out
CV
dMS2 (L)10ACh26527.6%0.9
MNwm35 (L)1unc828.5%0.0
vMS12_d (L)2ACh757.8%0.4
hg1 MN (L)1ACh727.5%0.0
IN06B036 (R)3GABA58.56.1%0.5
dMS2 (R)8ACh555.7%1.0
vMS12_c (L)2ACh525.4%0.1
IN06B066 (R)6GABA40.54.2%0.6
vMS12_d (R)2ACh30.53.2%0.3
vMS12_a (L)3ACh272.8%0.4
vMS12_b (L)1ACh18.51.9%0.0
IN11B004 (L)1GABA17.51.8%0.0
IN06B036 (L)2GABA15.51.6%0.5
IN06B043 (R)3GABA14.51.5%0.9
vMS12_c (R)2ACh121.2%0.1
vMS12_e (L)1ACh11.51.2%0.0
IN06B043 (L)3GABA111.1%0.8
i2 MN (L)1ACh9.51.0%0.0
hg1 MN (R)1ACh7.50.8%0.0
IN12A044 (L)3ACh5.50.6%0.8
vMS12_a (R)3ACh5.50.6%0.3
IN11B004 (R)1GABA50.5%0.0
vMS12_e (R)1ACh4.50.5%0.0
IN12A042 (L)3ACh4.50.5%0.3
IN06B066 (L)5GABA4.50.5%0.4
IN11B024_a (L)1GABA3.50.4%0.0
i1 MN (L)1ACh3.50.4%0.0
IN11B024_c (L)2GABA3.50.4%0.1
hg4 MN (L)1unc30.3%0.0
MNwm35 (R)1unc30.3%0.0
vMS12_b (R)1ACh30.3%0.0
IN06B047 (R)3GABA30.3%0.7
IN06B053 (R)2GABA2.50.3%0.6
IN11B024_a (R)1GABA2.50.3%0.0
IN06B061 (R)2GABA2.50.3%0.2
IN11B024_b (L)2GABA20.2%0.5
IN12A042 (R)2ACh20.2%0.0
AN06B046 (R)1GABA10.1%0.0
IN06B052 (R)1GABA10.1%0.0
vMS11 (L)2Glu10.1%0.0
vPR6 (L)2ACh10.1%0.0
IN03B058 (L)2GABA10.1%0.0
IN11B014 (L)2GABA10.1%0.0
dMS5 (L)1ACh10.1%0.0
IN06B064 (R)1GABA0.50.1%0.0
AN08B047 (L)1ACh0.50.1%0.0
IN11B013 (L)1GABA0.50.1%0.0
IN06B047 (L)1GABA0.50.1%0.0
hg3 MN (R)1GABA0.50.1%0.0
IN17A091 (L)1ACh0.50.1%0.0
IN11B025 (L)1GABA0.50.1%0.0
IN06B017 (R)1GABA0.50.1%0.0
TN1a_g (R)1ACh0.50.1%0.0
TN1a_d (R)1ACh0.50.1%0.0
IN08B035 (L)1ACh0.50.1%0.0
IN03B024 (L)1GABA0.50.1%0.0
IN12A006 (L)1ACh0.50.1%0.0
ps1 MN (L)1unc0.50.1%0.0
IN06B013 (R)1GABA0.50.1%0.0
IN12A002 (L)1ACh0.50.1%0.0
IN19B008 (L)1ACh0.50.1%0.0
AN08B097 (R)1ACh0.50.1%0.0
IN12A044 (R)1ACh0.50.1%0.0
IN17A048 (L)1ACh0.50.1%0.0
vPR9_a (M)1GABA0.50.1%0.0
IN17A101 (L)1ACh0.50.1%0.0
IN08B051_e (L)1ACh0.50.1%0.0
IN17A027 (R)1ACh0.50.1%0.0
IN06B013 (L)1GABA0.50.1%0.0
dPR1 (R)1ACh0.50.1%0.0
vMS16 (R)1unc0.50.1%0.0
AN08B103 (L)1ACh0.50.1%0.0
AN08B097 (L)1ACh0.50.1%0.0
AN17B013 (L)1GABA0.50.1%0.0