Male CNS – Cell Type Explorer

IN11B021_a(R)[T2]{11B}

3
Total Neurons
Right: 2 | Left: 1
log ratio : -1.00
989
Total Synapses
Post: 704 | Pre: 285
log ratio : -1.30
494.5
Mean Synapses
Post: 352 | Pre: 142.5
log ratio : -1.30
GABA(90.3% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (4 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
WTct(UTct-T2)(R)64491.5%-1.2826693.3%
VNC-unspecified497.0%-1.91134.6%
IntTct111.6%-1.4641.4%
MesoAN(R)00.0%inf20.7%

Connectivity

Inputs

upstream
partner
#NTconns
IN11B021_a
%
In
CV
IN02A010 (R)2Glu6820.5%0.1
IN19B091 (L)8ACh4112.3%0.5
INXXX095 (L)2ACh206.0%0.3
IN18B049 (L)1ACh164.8%0.0
IN17A064 (R)3ACh14.54.4%0.2
IN04B022 (R)2ACh12.53.8%0.3
IN19B023 (R)1ACh123.6%0.0
IN06B030 (L)2GABA123.6%0.1
SApp134ACh11.53.5%0.6
IN18B043 (L)1ACh113.3%0.0
AN19B001 (L)2ACh8.52.6%0.6
ANXXX169 (R)2Glu8.52.6%0.9
IN19B023 (L)1ACh82.4%0.0
IN19B090 (L)4ACh6.52.0%0.8
IN17A078 (R)2ACh61.8%0.7
IN17A048 (R)2ACh51.5%0.0
IN18B052 (L)1ACh4.51.4%0.0
IN07B083_b (L)3ACh41.2%0.6
IN17A112 (R)2ACh3.51.1%0.1
IN07B083_a (L)1ACh30.9%0.0
IN03A003 (R)1ACh30.9%0.0
IN17A113 (R)1ACh2.50.8%0.0
DNg93 (L)1GABA2.50.8%0.0
IN17A059,IN17A063 (R)1ACh2.50.8%0.0
IN14B001 (L)1GABA20.6%0.0
IN17A084 (R)1ACh20.6%0.0
SNpp041ACh20.6%0.0
DNg26 (L)2unc20.6%0.0
w-cHIN (L)3ACh20.6%0.4
IN03B070 (R)2GABA20.6%0.5
IN07B075 (L)1ACh1.50.5%0.0
AN08B005 (L)1ACh1.50.5%0.0
SApp041ACh1.50.5%0.0
AN19B025 (L)1ACh1.50.5%0.0
IN17A056 (R)1ACh1.50.5%0.0
IN19B053 (L)1ACh1.50.5%0.0
AN18B004 (L)1ACh1.50.5%0.0
dMS5 (L)1ACh1.50.5%0.0
DNge049 (L)1ACh1.50.5%0.0
IN19B077 (L)2ACh1.50.5%0.3
IN07B083_d (L)1ACh10.3%0.0
IN19B070 (L)1ACh10.3%0.0
DNg74_b (L)1GABA10.3%0.0
IN11B021_b (R)2GABA10.3%0.0
IN17A067 (R)1ACh10.3%0.0
IN01A017 (L)1ACh10.3%0.0
IN12A006 (R)1ACh10.3%0.0
IN11B019 (R)2GABA10.3%0.0
IN19B056 (L)2ACh10.3%0.0
IN03B074 (R)1GABA0.50.2%0.0
IN19B103 (L)1ACh0.50.2%0.0
IN03B049 (R)1GABA0.50.2%0.0
IN08B035 (L)1ACh0.50.2%0.0
IN10B023 (L)1ACh0.50.2%0.0
SNpp091ACh0.50.2%0.0
IN17A101 (R)1ACh0.50.2%0.0
IN17A114 (R)1ACh0.50.2%0.0
IN16B069 (R)1Glu0.50.2%0.0
IN19B043 (L)1ACh0.50.2%0.0
IN17A057 (R)1ACh0.50.2%0.0
IN04B058 (R)1ACh0.50.2%0.0
IN08B078 (L)1ACh0.50.2%0.0
iii3 MN (R)1unc0.50.2%0.0
IN17A020 (R)1ACh0.50.2%0.0
INXXX076 (R)1ACh0.50.2%0.0
IN06A013 (R)1GABA0.50.2%0.0
IN02A004 (R)1Glu0.50.2%0.0
IN06B018 (L)1GABA0.50.2%0.0
DNg32 (L)1ACh0.50.2%0.0

Outputs

downstream
partner
#NTconns
IN11B021_a
%
Out
CV
IN03B001 (R)1ACh9022.2%0.0
tpn MN (R)1unc46.511.5%0.0
IN19B056 (L)3ACh307.4%0.4
IN01A017 (L)1ACh23.55.8%0.0
IN11B005 (R)1GABA18.54.6%0.0
IN17A064 (R)3ACh18.54.6%0.2
iii3 MN (R)1unc164.0%0.0
IN03B070 (R)4GABA143.5%0.5
IN03B060 (R)8GABA12.53.1%0.5
MNwm36 (R)1unc9.52.3%0.0
iii1 MN (R)1unc92.2%0.0
IN07B098 (L)3ACh6.51.6%0.9
tp2 MN (R)1unc5.51.4%0.0
IN19B070 (L)2ACh5.51.4%0.1
IN19B077 (L)2ACh5.51.4%0.1
IN03B068 (R)1GABA51.2%0.0
IN19A026 (R)1GABA4.51.1%0.0
IN19B091 (L)3ACh4.51.1%0.5
IN17A048 (R)2ACh41.0%0.0
IN03B074 (R)3GABA3.50.9%0.5
IN19B067 (L)1ACh30.7%0.0
IN19B002 (L)1ACh30.7%0.0
IN07B083_b (L)3ACh30.7%0.4
IN19B048 (R)1ACh2.50.6%0.0
IN11B001 (R)2ACh2.50.6%0.6
IN19B031 (R)1ACh2.50.6%0.0
IN17A078 (R)2ACh2.50.6%0.2
IN10B023 (L)1ACh2.50.6%0.0
IN19B045 (R)2ACh2.50.6%0.2
IN19B069 (R)1ACh20.5%0.0
hg4 MN (R)1unc20.5%0.0
INXXX119 (L)1GABA20.5%0.0
IN16B016 (R)1Glu20.5%0.0
IN19B069 (L)1ACh1.50.4%0.0
IN19B066 (R)1ACh1.50.4%0.0
IN05B008 (R)1GABA1.50.4%0.0
IN11B013 (R)2GABA1.50.4%0.3
IN08A016 (R)1Glu10.2%0.0
IN03A003 (R)1ACh10.2%0.0
IN19B045, IN19B052 (R)1ACh10.2%0.0
IN06A002 (R)1GABA10.2%0.0
IN19B073 (R)1ACh10.2%0.0
IN17A106_a (R)1ACh10.2%0.0
IN06B069 (L)1GABA10.2%0.0
IN07B038 (L)1ACh10.2%0.0
IN07B039 (L)1ACh10.2%0.0
IN13B008 (L)1GABA10.2%0.0
IN16B068_c (R)1Glu10.2%0.0
IN19B090 (L)2ACh10.2%0.0
IN16B068_a (R)1Glu10.2%0.0
IN02A010 (R)1Glu10.2%0.0
IN17A082, IN17A086 (R)2ACh10.2%0.0
IN07B094_c (L)1ACh0.50.1%0.0
INXXX083 (R)1ACh0.50.1%0.0
IN11B021_b (R)1GABA0.50.1%0.0
IN11B019 (R)1GABA0.50.1%0.0
IN11B021_d (R)1GABA0.50.1%0.0
IN06B074 (L)1GABA0.50.1%0.0
IN19B066 (L)1ACh0.50.1%0.0
IN08A011 (R)1Glu0.50.1%0.0
IN17A088, IN17A089 (R)1ACh0.50.1%0.0
IN18B043 (L)1ACh0.50.1%0.0
IN12A002 (R)1ACh0.50.1%0.0
IN19B056 (R)1ACh0.50.1%0.0
IN17A112 (R)1ACh0.50.1%0.0
IN19B031 (L)1ACh0.50.1%0.0
INXXX076 (L)1ACh0.50.1%0.0
IN03B024 (R)1GABA0.50.1%0.0
dMS2 (R)1ACh0.50.1%0.0
w-cHIN (L)1ACh0.50.1%0.0
IN06A086 (R)1GABA0.50.1%0.0
IN05B016 (L)1GABA0.50.1%0.0
IN07B083_a (L)1ACh0.50.1%0.0
IN03B059 (R)1GABA0.50.1%0.0
IN11B021_e (R)1GABA0.50.1%0.0
IN19A043 (R)1GABA0.50.1%0.0
IN06B085 (L)1GABA0.50.1%0.0
IN03B058 (R)1GABA0.50.1%0.0
IN16B068_b (R)1Glu0.50.1%0.0
IN17A074 (R)1ACh0.50.1%0.0
IN06A057 (R)1GABA0.50.1%0.0
IN16B063 (R)1Glu0.50.1%0.0
IN06B038 (L)1GABA0.50.1%0.0
IN06A016 (R)1GABA0.50.1%0.0
IN06B047 (L)1GABA0.50.1%0.0
IN19B037 (R)1ACh0.50.1%0.0
IN12A025 (R)1ACh0.50.1%0.0
IN19B023 (R)1ACh0.50.1%0.0
ps1 MN (R)1unc0.50.1%0.0
DNge045 (R)1GABA0.50.1%0.0
DNg75 (L)1ACh0.50.1%0.0