Male CNS – Cell Type Explorer

IN11B021_a[T2]{11B}

3
Total Neurons
Right: 2 | Left: 1
log ratio : -1.00
1,565
Total Synapses
Right: 989 | Left: 576
log ratio : -0.78
521.7
Mean Synapses
Right: 494.5 | Left: 576
log ratio : 0.22
GABA(90.3% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (5 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
WTct(UTct-T2)90981.3%-1.2837483.7%
VNC-unspecified16514.8%-1.376414.3%
LegNp(T2)252.2%-3.6420.4%
IntTct191.7%-1.9351.1%
MesoAN00.0%inf20.4%

Connectivity

Inputs

upstream
partner
#NTconns
IN11B021_a
%
In
CV
IN02A0104Glu70.319.8%0.1
IN19B09116ACh4813.5%0.5
INXXX0954ACh195.3%0.4
IN19B0232ACh17.75.0%0.0
IN17A0647ACh16.74.7%0.4
IN18B0492ACh15.34.3%0.0
IN04B0224ACh13.33.7%0.3
SApp137ACh12.33.5%0.6
IN18B0432ACh11.33.2%0.0
IN06B0303GABA10.32.9%0.1
ANXXX1694Glu8.72.4%0.8
w-cHIN6ACh72.0%0.5
IN19B0907ACh6.71.9%0.5
AN19B0013ACh61.7%0.4
IN17A0784ACh5.31.5%0.6
IN17A0483ACh51.4%0.0
IN07B083_b6ACh51.4%0.6
IN18B0522ACh4.71.3%0.0
IN07B083_a2ACh3.71.0%0.0
IN17A059,IN17A0633ACh3.71.0%0.0
DNge0671GABA2.70.7%0.0
IN03A0032ACh2.70.7%0.0
IN17A1122ACh2.30.7%0.1
IN11B0195GABA2.30.7%0.2
DNge0641Glu20.6%0.0
DNg264unc20.6%0.0
IN19B0532ACh20.6%0.0
IN07B083_c1ACh1.70.5%0.0
IN04B0291ACh1.70.5%0.0
IN07B0121ACh1.70.5%0.0
IN17A1131ACh1.70.5%0.0
DNg931GABA1.70.5%0.0
IN03B0703GABA1.70.5%0.3
IN17A0562ACh1.70.5%0.0
IN14B0011GABA1.30.4%0.0
IN17A0841ACh1.30.4%0.0
SNpp041ACh1.30.4%0.0
IN04B0582ACh1.30.4%0.0
dMS52ACh1.30.4%0.0
IN11B021_b3GABA1.30.4%0.0
IN07B083_d2ACh1.30.4%0.0
IN01A0172ACh1.30.4%0.0
IN07B0751ACh10.3%0.0
AN08B0051ACh10.3%0.0
SApp041ACh10.3%0.0
AN19B0251ACh10.3%0.0
AN18B0041ACh10.3%0.0
SNpp372ACh10.3%0.3
DNge0491ACh10.3%0.0
IN19B0772ACh10.3%0.3
IN17A0672ACh10.3%0.0
IN16B0871Glu0.70.2%0.0
SNpp281ACh0.70.2%0.0
INXXX0081unc0.70.2%0.0
INXXX0031GABA0.70.2%0.0
SApp1ACh0.70.2%0.0
DNg951ACh0.70.2%0.0
IN19B0701ACh0.70.2%0.0
DNg74_b1GABA0.70.2%0.0
IN07B0982ACh0.70.2%0.0
SNpp112ACh0.70.2%0.0
IN12A0061ACh0.70.2%0.0
IN19B0562ACh0.70.2%0.0
IN19B1032ACh0.70.2%0.0
IN17A0572ACh0.70.2%0.0
IN06A0021GABA0.30.1%0.0
IN11B021_d1GABA0.30.1%0.0
IN19B1091ACh0.30.1%0.0
IN03B0551GABA0.30.1%0.0
IN11B021_c1GABA0.30.1%0.0
IN03B0581GABA0.30.1%0.0
IN06A0521GABA0.30.1%0.0
IN06B0471GABA0.30.1%0.0
IN19A0151GABA0.30.1%0.0
DNg761ACh0.30.1%0.0
DNge150 (M)1unc0.30.1%0.0
IN03B0741GABA0.30.1%0.0
IN03B0491GABA0.30.1%0.0
IN08B0351ACh0.30.1%0.0
IN10B0231ACh0.30.1%0.0
SNpp091ACh0.30.1%0.0
IN17A1011ACh0.30.1%0.0
IN17A1141ACh0.30.1%0.0
IN16B0691Glu0.30.1%0.0
IN19B0431ACh0.30.1%0.0
IN08B0781ACh0.30.1%0.0
iii3 MN1unc0.30.1%0.0
IN17A0201ACh0.30.1%0.0
INXXX0761ACh0.30.1%0.0
IN06A0131GABA0.30.1%0.0
IN02A0041Glu0.30.1%0.0
IN06B0181GABA0.30.1%0.0
DNg321ACh0.30.1%0.0

Outputs

downstream
partner
#NTconns
IN11B021_a
%
Out
CV
IN03B0012ACh9422.2%0.0
tpn MN2unc5112.1%0.0
IN19B0566ACh28.36.7%0.4
IN01A0172ACh23.75.6%0.0
IN03B0709GABA19.74.7%0.5
iii3 MN2unc16.73.9%0.0
IN11B0052GABA15.33.6%0.0
IN17A0647ACh15.33.6%0.4
IN03B06013GABA12.32.9%0.6
MNwm362unc112.6%0.0
IN19B0454ACh92.1%0.4
iii1 MN2unc92.1%0.0
IN19B0916ACh7.31.7%0.7
IN07B0985ACh61.4%0.6
IN19A0262GABA5.31.3%0.0
IN19B0312ACh4.71.1%0.0
tp2 MN2unc4.31.0%0.0
IN19B0703ACh4.31.0%0.1
IN19B0773ACh40.9%0.1
IN16B0162Glu40.9%0.0
IN03B0745GABA40.9%0.6
IN17A0483ACh3.70.9%0.0
IN19B0482ACh3.70.9%0.0
IN19B0672ACh3.70.9%0.0
IN07B083_b5ACh3.70.9%0.5
IN03B0681GABA3.30.8%0.0
IN17A0785ACh3.30.8%0.2
IN19B0664ACh3.30.8%0.2
hg4 MN2unc30.7%0.0
IN19B0022ACh2.70.6%0.0
IN19B0692ACh2.30.6%0.0
IN11B0012ACh1.70.4%0.6
IN10B0231ACh1.70.4%0.0
INXXX1191GABA1.30.3%0.0
IN07B083_a2ACh1.30.3%0.0
IN05B0082GABA1.30.3%0.0
IN11B0132GABA10.2%0.3
IN06A0862GABA10.2%0.0
IN08A0162Glu10.2%0.0
IN06A0022GABA10.2%0.0
IN07B0392ACh10.2%0.0
IN19B0903ACh10.2%0.0
IN02A0102Glu10.2%0.0
IN11B021_c1GABA0.70.2%0.0
IN17A0601Glu0.70.2%0.0
DNa091ACh0.70.2%0.0
IN03A0031ACh0.70.2%0.0
IN19B045, IN19B0521ACh0.70.2%0.0
IN19B0731ACh0.70.2%0.0
IN17A106_a1ACh0.70.2%0.0
IN06B0691GABA0.70.2%0.0
IN07B0381ACh0.70.2%0.0
IN13B0081GABA0.70.2%0.0
IN16B068_c1Glu0.70.2%0.0
IN16B068_a1Glu0.70.2%0.0
IN17A082, IN17A0862ACh0.70.2%0.0
IN11B021_b2GABA0.70.2%0.0
IN11B0192GABA0.70.2%0.0
IN17B0041GABA0.30.1%0.0
IN21A0221ACh0.30.1%0.0
IN03B0841GABA0.30.1%0.0
IN03B0851GABA0.30.1%0.0
IN08B1041ACh0.30.1%0.0
IN03B0751GABA0.30.1%0.0
IN11B0201GABA0.30.1%0.0
IN19B0821ACh0.30.1%0.0
IN07B0751ACh0.30.1%0.0
IN19B0621ACh0.30.1%0.0
IN19B0531ACh0.30.1%0.0
IN07B083_d1ACh0.30.1%0.0
IN07B0991ACh0.30.1%0.0
INXXX1731ACh0.30.1%0.0
INXXX0381ACh0.30.1%0.0
DNge0041Glu0.30.1%0.0
AN19B0651ACh0.30.1%0.0
IN07B094_c1ACh0.30.1%0.0
INXXX0831ACh0.30.1%0.0
IN11B021_d1GABA0.30.1%0.0
IN06B0741GABA0.30.1%0.0
IN08A0111Glu0.30.1%0.0
IN17A088, IN17A0891ACh0.30.1%0.0
IN18B0431ACh0.30.1%0.0
IN12A0021ACh0.30.1%0.0
IN17A1121ACh0.30.1%0.0
INXXX0761ACh0.30.1%0.0
IN03B0241GABA0.30.1%0.0
dMS21ACh0.30.1%0.0
w-cHIN1ACh0.30.1%0.0
IN05B0161GABA0.30.1%0.0
IN03B0591GABA0.30.1%0.0
IN11B021_e1GABA0.30.1%0.0
IN19A0431GABA0.30.1%0.0
IN06B0851GABA0.30.1%0.0
IN03B0581GABA0.30.1%0.0
IN16B068_b1Glu0.30.1%0.0
IN17A0741ACh0.30.1%0.0
IN06A0571GABA0.30.1%0.0
IN16B0631Glu0.30.1%0.0
IN06B0381GABA0.30.1%0.0
IN06A0161GABA0.30.1%0.0
IN06B0471GABA0.30.1%0.0
IN19B0371ACh0.30.1%0.0
IN12A0251ACh0.30.1%0.0
IN19B0231ACh0.30.1%0.0
ps1 MN1unc0.30.1%0.0
DNge0451GABA0.30.1%0.0
DNg751ACh0.30.1%0.0