Male CNS – Cell Type Explorer

IN06A021(R)[T3]{06A}

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
1,251
Total Synapses
Post: 663 | Pre: 588
log ratio : -0.17
1,251
Mean Synapses
Post: 663 | Pre: 588
log ratio : -0.17
GABA(88.4% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (7 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
HTct(UTct-T3)(L)588.7%3.0548081.6%
HTct(UTct-T3)(R)45067.9%-8.8110.2%
ANm436.5%1.209916.8%
IntTct578.6%-2.8381.4%
WTct(UTct-T2)(R)466.9%-inf00.0%
DMetaN(R)50.8%-inf00.0%
VNC-unspecified40.6%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
IN06A021
%
In
CV
DNg08 (R)6GABA639.7%0.6
SApp19,SApp215ACh467.1%0.3
SApp106ACh416.3%1.1
IN07B063 (L)2ACh365.5%0.7
SNpp113ACh324.9%0.7
IN16B111 (R)2Glu304.6%0.2
IN07B077 (L)3ACh284.3%0.7
SApp09,SApp229ACh284.3%0.8
IN17B017 (R)1GABA243.7%0.0
IN02A019 (L)1Glu223.4%0.0
SApp9ACh192.9%0.7
IN06B076 (L)3GABA182.8%0.1
IN16B106 (R)3Glu162.5%0.7
AN06B051 (L)2GABA152.3%0.2
IN11B012 (R)1GABA121.8%0.0
DNp33 (R)1ACh121.8%0.0
SApp133ACh121.8%0.2
SNpp361ACh111.7%0.0
SNpp082ACh111.7%0.3
IN07B075 (L)1ACh91.4%0.0
IN06A021 (L)1GABA91.4%0.0
IN07B083_c (L)1ACh81.2%0.0
IN02A062 (R)2Glu81.2%0.5
IN16B104 (R)1Glu71.1%0.0
AN07B032 (L)1ACh71.1%0.0
IN06B017 (L)2GABA71.1%0.1
IN07B083_d (L)1ACh50.8%0.0
IN06A037 (L)1GABA50.8%0.0
IN16B087 (R)1Glu40.6%0.0
IN06B017 (R)1GABA40.6%0.0
DNb06 (L)1ACh40.6%0.0
IN06A108 (L)2GABA40.6%0.5
IN07B081 (L)2ACh40.6%0.5
IN02A028 (L)1Glu30.5%0.0
IN06B064 (L)1GABA30.5%0.0
IN19B053 (L)1ACh30.5%0.0
SApp081ACh30.5%0.0
AN06B046 (L)1GABA30.5%0.0
IN06B081 (L)2GABA30.5%0.3
IN16B093 (R)2Glu30.5%0.3
DNge093 (L)2ACh30.5%0.3
IN06B064 (R)1GABA20.3%0.0
IN06A094 (L)1GABA20.3%0.0
IN07B092_a (R)1ACh20.3%0.0
IN17A056 (R)1ACh20.3%0.0
IN06B025 (L)1GABA20.3%0.0
INXXX266 (L)1ACh20.3%0.0
IN03B038 (R)1GABA20.3%0.0
IN18B020 (L)1ACh20.3%0.0
IN06A013 (R)1GABA20.3%0.0
IN02A007 (R)1Glu20.3%0.0
IN07B038 (R)1ACh20.3%0.0
AN06B068 (L)1GABA20.3%0.0
DNpe054 (R)1ACh20.3%0.0
SNpp042ACh20.3%0.0
SApp06,SApp152ACh20.3%0.0
SApp042ACh20.3%0.0
IN16B066 (R)1Glu10.2%0.0
IN06B081 (R)1GABA10.2%0.0
IN06A022 (R)1GABA10.2%0.0
IN02A032 (L)1Glu10.2%0.0
IN19B045, IN19B052 (R)1ACh10.2%0.0
IN07B087 (L)1ACh10.2%0.0
IN06A128 (L)1GABA10.2%0.0
IN08B108 (L)1ACh10.2%0.0
SNpp201ACh10.2%0.0
IN07B084 (L)1ACh10.2%0.0
SNpp191ACh10.2%0.0
IN06B082 (L)1GABA10.2%0.0
IN07B092_c (R)1ACh10.2%0.0
IN08B088 (L)1ACh10.2%0.0
IN02A032 (R)1Glu10.2%0.0
IN06A036 (R)1GABA10.2%0.0
IN19B045, IN19B052 (L)1ACh10.2%0.0
IN06A056 (R)1GABA10.2%0.0
IN07B039 (L)1ACh10.2%0.0
IN17B017 (L)1GABA10.2%0.0
IN17B015 (L)1GABA10.2%0.0
IN02A013 (R)1Glu10.2%0.0
IN27X007 (L)1unc10.2%0.0
IN07B022 (L)1ACh10.2%0.0
EAXXX079 (R)1unc10.2%0.0
AN09A005 (L)1unc10.2%0.0
AN08B079_a (R)1ACh10.2%0.0
AN19B065 (L)1ACh10.2%0.0
AN07B032 (R)1ACh10.2%0.0
AN06A026 (L)1GABA10.2%0.0
AN06B068 (R)1GABA10.2%0.0
AN19B046 (L)1ACh10.2%0.0
DNge090 (L)1ACh10.2%0.0
AN06B089 (L)1GABA10.2%0.0
AN10B008 (L)1ACh10.2%0.0

Outputs

downstream
partner
#NTconns
IN06A021
%
Out
CV
IN07B100 (L)5ACh14710.1%0.4
IN07B087 (L)6ACh1409.6%0.9
AN19B060 (L)2ACh1399.6%0.2
AN19B046 (L)2ACh1379.4%0.1
IN02A019 (L)1Glu1228.4%0.0
IN06A071 (L)2GABA996.8%0.5
IN06A038 (L)1Glu956.5%0.0
IN07B098 (L)5ACh815.6%0.7
IN07B038 (L)1ACh765.2%0.0
IN07B096_c (L)2ACh463.2%0.2
IN06A125 (L)3GABA372.5%0.8
IN07B096_a (L)2ACh362.5%0.6
IN06A079 (L)2GABA322.2%0.4
AN19B059 (L)2ACh312.1%0.9
IN02A028 (R)1Glu292.0%0.0
IN11B012 (L)1GABA271.9%0.0
MNad40 (L)1unc231.6%0.0
IN06A128 (L)1GABA191.3%0.0
IN18B028 (L)1ACh141.0%0.0
IN03B084 (L)2GABA120.8%0.8
IN13A013 (L)1GABA100.7%0.0
IN06A126,IN06A137 (L)1GABA80.5%0.0
SNpp112ACh80.5%0.5
MNad32 (L)1unc60.4%0.0
IN06A137 (L)1GABA50.3%0.0
IN03B070 (L)1GABA50.3%0.0
INXXX044 (L)1GABA50.3%0.0
IN06A108 (L)1GABA40.3%0.0
MNad35 (L)1unc40.3%0.0
IN06A021 (L)1GABA40.3%0.0
IN06A025 (L)1GABA40.3%0.0
IN18B020 (L)1ACh40.3%0.0
IN07B102 (L)1ACh30.2%0.0
IN06A077 (L)1GABA30.2%0.0
IN07B076_d (L)1ACh30.2%0.0
IN16B059 (L)1Glu30.2%0.0
IN07B083_d (L)1ACh30.2%0.0
IN06A052 (L)1GABA20.1%0.0
IN07B083_b (L)1ACh20.1%0.0
IN07B102 (R)1ACh20.1%0.0
MNad41 (L)1unc20.1%0.0
Sternotrochanter MN (L)1unc20.1%0.0
AN08B010 (L)1ACh20.1%0.0
IN06B081 (R)2GABA20.1%0.0
IN07B079 (L)2ACh20.1%0.0
SApp2ACh20.1%0.0
IN02A028 (L)1Glu10.1%0.0
INXXX119 (R)1GABA10.1%0.0
IN05B016 (R)1GABA10.1%0.0
IN16B089 (L)1Glu10.1%0.0
IN03B091 (L)1GABA10.1%0.0
IN16B106 (L)1Glu10.1%0.0
IN19B081 (L)1ACh10.1%0.0
IN07B086 (L)1ACh10.1%0.0
IN06A052 (R)1GABA10.1%0.0
IN06A009 (L)1GABA10.1%0.0
IN06B017 (R)1GABA10.1%0.0
AN19B065 (L)1ACh10.1%0.0
SApp041ACh10.1%0.0