Male CNS – Cell Type Explorer

IN06A011(L)[T2]{06A}

6
Total Neurons
Right: 3 | Left: 3
log ratio : 0.00
2,697
Total Synapses
Post: 1,768 | Pre: 929
log ratio : -0.93
899
Mean Synapses
Post: 589.3 | Pre: 309.7
log ratio : -0.93
GABA(82.2% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (8 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
IntTct1,37177.5%-1.5646550.1%
NTct(UTct-T1)(R)171.0%3.9125527.4%
WTct(UTct-T2)(R)231.3%3.1520422.0%
HTct(UTct-T3)(L)1729.7%-inf00.0%
VNC-unspecified1146.4%-5.8320.2%
DMetaN(L)492.8%-5.6110.1%
WTct(UTct-T2)(L)221.2%-3.4620.2%
HTct(UTct-T3)(R)00.0%0.0000.0%

Connectivity

Inputs

upstream
partner
#NTconns
IN06A011
%
In
CV
IN07B084 (R)2ACh46.78.9%0.4
IN11B023 (L)5GABA40.77.7%0.8
SApp09,SApp2220ACh315.9%0.8
IN06A097 (R)2GABA22.34.2%0.0
IN06A022 (L)7GABA19.73.7%0.5
DNge091 (R)5ACh193.6%0.8
IN06B017 (R)4GABA173.2%0.6
DNpe004 (L)2ACh16.33.1%0.5
IN06A102 (R)5GABA15.32.9%0.5
SApp9ACh15.32.9%0.9
IN11B017_b (L)4GABA13.32.5%0.2
IN12A008 (L)1ACh132.5%0.0
IN12A054 (L)5ACh12.32.3%0.7
IN06A082 (R)8GABA10.72.0%0.6
IN06A094 (R)4GABA10.32.0%0.8
IN06A042 (L)3GABA10.32.0%0.5
IN06B074 (R)3GABA8.71.6%0.6
IN19B048 (R)2ACh81.5%0.8
IN06A011 (L)3GABA81.5%0.0
IN06A096 (R)3GABA81.5%0.9
DNp22 (L)1ACh7.71.5%0.0
IN08B093 (R)5ACh7.71.5%0.4
DNp21 (L)1ACh71.3%0.0
IN19B071 (R)2ACh6.71.3%0.2
SNpp197ACh6.71.3%0.4
IN21A088 (L)1Glu5.31.0%0.0
IN06B086 (R)1GABA51.0%0.0
AN06B046 (R)1GABA4.70.9%0.0
AN18B025 (R)1ACh4.70.9%0.0
IN11B018 (L)2GABA4.70.9%0.4
IN06B082 (R)2GABA4.70.9%0.1
AN06A092 (R)3GABA4.70.9%0.4
IN02A026 (L)1Glu3.70.7%0.0
IN06A122 (R)1GABA3.70.7%0.0
IN06B058 (R)2GABA3.70.7%0.1
AN06A041 (R)1GABA3.30.6%0.0
IN07B033 (L)1ACh3.30.6%0.0
IN06A065 (R)2GABA30.6%0.8
ANXXX171 (L)1ACh2.70.5%0.0
IN12A012 (L)1GABA2.70.5%0.0
AN19B039 (R)1ACh2.70.5%0.0
AN06A080 (R)2GABA2.70.5%0.5
IN07B047 (R)1ACh2.30.4%0.0
DNg91 (L)1ACh2.30.4%0.0
IN11B017_a (L)2GABA2.30.4%0.1
IN06A076_a (R)1GABA20.4%0.0
DNp26 (R)1ACh20.4%0.0
IN06A086 (L)1GABA20.4%0.0
AN07B046_c (L)1ACh1.70.3%0.0
IN06B017 (L)1GABA1.70.3%0.0
IN06A087 (R)2GABA1.70.3%0.2
IN12A034 (L)1ACh1.70.3%0.0
IN12A061_a (R)2ACh1.70.3%0.2
IN06A019 (L)3GABA1.70.3%0.3
DNp22 (R)1ACh1.30.3%0.0
IN06A046 (L)1GABA1.30.3%0.0
DNp16_a (L)1ACh1.30.3%0.0
IN06A054 (R)1GABA1.30.3%0.0
IN06B076 (R)2GABA1.30.3%0.0
DNg18_b (R)2GABA1.30.3%0.5
IN06A044 (L)3GABA1.30.3%0.4
AN07B003 (R)1ACh1.30.3%0.0
IN06A085 (R)1GABA10.2%0.0
IN06B025 (R)1GABA10.2%0.0
IN06A067_b (R)1GABA10.2%0.0
IN07B081 (R)1ACh10.2%0.0
IN06A067_e (R)1GABA10.2%0.0
AN06B068 (R)1GABA10.2%0.0
IN07B033 (R)1ACh10.2%0.0
IN11A031 (L)2ACh10.2%0.3
IN11B022_c (L)2GABA10.2%0.3
DNg51 (R)1ACh10.2%0.0
IN08B091 (L)1ACh10.2%0.0
IN06B042 (L)1GABA10.2%0.0
IN06A032 (L)1GABA0.70.1%0.0
IN07B102 (R)1ACh0.70.1%0.0
IN07B077 (R)1ACh0.70.1%0.0
IN06B055 (R)1GABA0.70.1%0.0
DNp53 (R)1ACh0.70.1%0.0
AN19B106 (R)1ACh0.70.1%0.0
AN06B051 (L)1GABA0.70.1%0.0
DNg42 (R)1Glu0.70.1%0.0
IN11B022_e (L)1GABA0.70.1%0.0
IN06A011 (R)1GABA0.70.1%0.0
IN12A060_a (L)1ACh0.70.1%0.0
IN06A004 (R)1Glu0.70.1%0.0
DNp28 (R)1ACh0.70.1%0.0
DNae002 (L)1ACh0.70.1%0.0
IN08B108 (L)1ACh0.70.1%0.0
IN27X007 (L)1unc0.70.1%0.0
AN06B023 (R)1GABA0.70.1%0.0
IN06A096 (L)2GABA0.70.1%0.0
IN06B081 (R)2GABA0.70.1%0.0
IN12A061_d (R)1ACh0.70.1%0.0
IN06A127 (L)1GABA0.70.1%0.0
IN17B004 (L)1GABA0.70.1%0.0
IN27X007 (R)1unc0.70.1%0.0
AN06B042 (L)1GABA0.70.1%0.0
IN06A110 (R)2GABA0.70.1%0.0
IN11A031 (R)1ACh0.70.1%0.0
IN06A059 (R)2GABA0.70.1%0.0
AN08B079_a (L)2ACh0.70.1%0.0
AN07B003 (L)1ACh0.70.1%0.0
IN01A020 (R)1ACh0.30.1%0.0
IN07B096_b (R)1ACh0.30.1%0.0
IN11B022_c (R)1GABA0.30.1%0.0
IN12A061_c (R)1ACh0.30.1%0.0
IN12A012 (R)1GABA0.30.1%0.0
IN11B017_b (R)1GABA0.30.1%0.0
IN06A069 (R)1GABA0.30.1%0.0
IN12A057_a (R)1ACh0.30.1%0.0
IN07B092_a (R)1ACh0.30.1%0.0
IN07B051 (L)1ACh0.30.1%0.0
IN06B055 (L)1GABA0.30.1%0.0
IN07B019 (R)1ACh0.30.1%0.0
AN19B104 (R)1ACh0.30.1%0.0
AN07B063 (R)1ACh0.30.1%0.0
AN07B049 (L)1ACh0.30.1%0.0
AN07B025 (L)1ACh0.30.1%0.0
DNge087 (L)1GABA0.30.1%0.0
IN19A026 (R)1GABA0.30.1%0.0
IN06A046 (R)1GABA0.30.1%0.0
IN12A061_a (L)1ACh0.30.1%0.0
IN06A057 (L)1GABA0.30.1%0.0
IN06A094 (L)1GABA0.30.1%0.0
IN12A061_d (L)1ACh0.30.1%0.0
IN06A013 (L)1GABA0.30.1%0.0
MNnm08 (R)1unc0.30.1%0.0
AN07B082_c (L)1ACh0.30.1%0.0
AN07B025 (R)1ACh0.30.1%0.0
AN07B021 (L)1ACh0.30.1%0.0
AN06B014 (R)1GABA0.30.1%0.0
DNa15 (L)1ACh0.30.1%0.0
IN07B077 (L)1ACh0.30.1%0.0
IN06A033 (L)1GABA0.30.1%0.0
IN11A028 (R)1ACh0.30.1%0.0
IN07B103 (L)1ACh0.30.1%0.0
IN06A044 (R)1GABA0.30.1%0.0
IN06A116 (L)1GABA0.30.1%0.0
IN06A081 (R)1GABA0.30.1%0.0
IN08B093 (L)1ACh0.30.1%0.0
IN06A065 (L)1GABA0.30.1%0.0
IN06B058 (L)1GABA0.30.1%0.0
AN07B060 (R)1ACh0.30.1%0.0
AN06B051 (R)1GABA0.30.1%0.0

Outputs

downstream
partner
#NTconns
IN06A011
%
Out
CV
IN11B017_b (R)4GABA41.36.7%0.3
i1 MN (R)1ACh406.5%0.0
IN01A020 (R)1ACh376.0%0.0
MNnm13 (R)1unc345.5%0.0
IN06B033 (R)1GABA335.3%0.0
w-cHIN (R)4ACh335.3%0.8
IN12A061_a (R)2ACh304.8%0.0
hg1 MN (R)1ACh28.74.6%0.0
IN07B033 (R)1ACh274.4%0.0
ADNM1 MN (L)1unc24.74.0%0.0
IN06A044 (R)4GABA213.4%0.6
IN11A031 (R)2ACh17.32.8%0.5
AN07B003 (R)1ACh15.32.5%0.0
MNnm11 (R)1unc14.32.3%0.0
IN06A022 (L)7GABA14.32.3%0.5
IN02A043 (R)3Glu142.3%0.8
IN18B039 (R)1ACh111.8%0.0
MNnm09 (R)1unc9.71.6%0.0
AN03B039 (R)1GABA8.31.3%0.0
MNnm07,MNnm12 (R)2unc8.31.3%0.4
IN06A011 (L)3GABA81.3%0.7
IN03B022 (R)1GABA7.31.2%0.0
IN12A061_d (R)1ACh7.31.2%0.0
IN02A033 (R)4Glu6.31.0%0.9
IN06A113 (R)4GABA6.31.0%0.9
AN06A016 (R)1GABA5.30.9%0.0
AN07B041 (R)2ACh5.30.9%0.4
IN02A049 (R)4Glu5.30.9%0.4
IN03B060 (R)5GABA4.70.8%0.8
IN06B014 (L)1GABA4.30.7%0.0
IN03B072 (R)3GABA4.30.7%0.9
IN07B006 (R)1ACh40.6%0.0
IN06A042 (L)3GABA40.6%0.5
IN11B022_c (R)4GABA40.6%0.5
IN12A012 (R)1GABA3.70.6%0.0
IN06A019 (L)3GABA3.70.6%0.6
IN12A061_c (R)2ACh3.70.6%0.3
i2 MN (R)1ACh3.30.5%0.0
IN12A054 (R)4ACh3.30.5%1.0
AN07B021 (R)1ACh30.5%0.0
MNhm42 (R)1unc2.30.4%0.0
IN11B022_e (R)1GABA2.30.4%0.0
IN03B061 (R)3GABA2.30.4%0.8
IN06A002 (R)1GABA20.3%0.0
IN06A020 (R)1GABA20.3%0.0
b3 MN (R)1unc20.3%0.0
IN07B099 (R)2ACh20.3%0.7
AN07B071_b (R)1ACh20.3%0.0
IN06A046 (R)1GABA20.3%0.0
IN06A059 (R)3GABA20.3%0.4
b2 MN (R)1ACh1.70.3%0.0
IN14B007 (R)1GABA1.70.3%0.0
IN02A047 (R)3Glu1.70.3%0.3
IN07B084 (R)1ACh1.30.2%0.0
AN07B082_a (R)1ACh1.30.2%0.0
IN06A097 (R)1GABA1.30.2%0.0
IN03B081 (R)1GABA10.2%0.0
IN11B012 (R)1GABA10.2%0.0
IN11A028 (R)1ACh10.2%0.0
IN12A050_b (R)1ACh10.2%0.0
IN06A096 (R)2GABA10.2%0.3
MNhm43 (R)1unc10.2%0.0
IN06A011 (R)1GABA10.2%0.0
ANXXX023 (R)1ACh0.70.1%0.0
IN06A044 (L)1GABA0.70.1%0.0
IN07B081 (R)1ACh0.70.1%0.0
AN07B071_a (R)1ACh0.70.1%0.0
IN02A018 (R)1Glu0.70.1%0.0
IN07B083_b (R)1ACh0.70.1%0.0
IN06A070 (R)1GABA0.70.1%0.0
IN11A018 (R)1ACh0.70.1%0.0
IN11B018 (R)1GABA0.70.1%0.0
IN03B069 (R)2GABA0.70.1%0.0
IN12A060_b (R)1ACh0.70.1%0.0
MNnm08 (R)1unc0.70.1%0.0
IN06A024 (R)1GABA0.70.1%0.0
IN11B017_a (R)1GABA0.70.1%0.0
IN11B017_b (L)1GABA0.30.1%0.0
IN06A116 (L)1GABA0.30.1%0.0
IN12A061_c (L)1ACh0.30.1%0.0
IN06A086 (L)1GABA0.30.1%0.0
IN12A057_a (R)1ACh0.30.1%0.0
IN11A037_b (R)1ACh0.30.1%0.0
IN08B093 (L)1ACh0.30.1%0.0
IN07B019 (R)1ACh0.30.1%0.0
b2 MN (L)1ACh0.30.1%0.0
IN02A007 (L)1Glu0.30.1%0.0
IN02A007 (R)1Glu0.30.1%0.0
hg1 MN (L)1ACh0.30.1%0.0
AN07B069_a (R)1ACh0.30.1%0.0
EA00B006 (M)1unc0.30.1%0.0
AN08B079_a (R)1ACh0.30.1%0.0
DNge087 (L)1GABA0.30.1%0.0
AN06B089 (L)1GABA0.30.1%0.0
DNg51 (L)1ACh0.30.1%0.0
IN06A075 (R)1GABA0.30.1%0.0
IN06A070 (L)1GABA0.30.1%0.0
IN08B108 (L)1ACh0.30.1%0.0
IN03B066 (R)1GABA0.30.1%0.0
IN02A029 (R)1Glu0.30.1%0.0
IN06A057 (L)1GABA0.30.1%0.0
MNwm35 (R)1unc0.30.1%0.0
AN06A062 (R)1GABA0.30.1%0.0
AN09A005 (R)1unc0.30.1%0.0
AN06B014 (L)1GABA0.30.1%0.0
IN11B022_d (R)1GABA0.30.1%0.0
IN06A096 (L)1GABA0.30.1%0.0
IN19A026 (R)1GABA0.30.1%0.0
IN06A122 (R)1GABA0.30.1%0.0
IN02A045 (L)1Glu0.30.1%0.0
IN06A082 (R)1GABA0.30.1%0.0
IN06A081 (R)1GABA0.30.1%0.0
IN11A035 (R)1ACh0.30.1%0.0
IN11A028 (L)1ACh0.30.1%0.0
SApp09,SApp221ACh0.30.1%0.0
AN07B071_d (R)1ACh0.30.1%0.0
AN11B008 (R)1GABA0.30.1%0.0