Male CNS – Cell Type Explorer

IN06A003(L)[T2]{06A}

4
Total Neurons
Right: 2 | Left: 2
log ratio : 0.00
7,405
Total Synapses
Post: 6,012 | Pre: 1,393
log ratio : -2.11
3,702.5
Mean Synapses
Post: 3,006 | Pre: 696.5
log ratio : -2.11
GABA(87.9% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (9 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
WTct(UTct-T2)(L)5,28087.8%-2.241,11980.3%
NTct(UTct-T1)(L)4878.1%-3.47443.2%
WTct(UTct-T2)(R)1312.2%0.6921215.2%
VNC-unspecified781.3%-2.58130.9%
IntTct100.2%-1.3240.3%
LegNp(T2)(L)120.2%-inf00.0%
PDMN(L)100.2%-inf00.0%
LTct30.0%-inf00.0%
LegNp(T1)(L)10.0%0.0010.1%

Connectivity

Inputs

upstream
partner
#NTconns
IN06A003
%
In
CV
IN19B034 (L)1ACh211.57.4%0.0
IN19B034 (R)1ACh1946.8%0.0
IN11B001 (L)3ACh117.54.1%0.1
IN19B023 (L)1ACh108.53.8%0.0
IN06B052 (R)2GABA1013.5%0.1
IN03B055 (L)5GABA96.53.4%0.5
IN19B023 (R)1ACh953.3%0.0
vMS12_c (L)2ACh893.1%0.4
IN11A021 (L)4ACh802.8%0.7
SNpp261ACh79.52.8%0.0
vMS12_b (L)1ACh65.52.3%0.0
IN19B013 (R)2ACh632.2%0.2
IN19B037 (R)1ACh572.0%0.0
SNpp353ACh541.9%0.2
IN03B082, IN03B093 (L)3GABA461.6%0.1
GFC2 (R)2ACh42.51.5%0.1
IN08B039 (R)1ACh41.51.5%0.0
IN17B001 (L)1GABA41.51.5%0.0
IN08A011 (L)5Glu411.4%0.8
SNpp271ACh40.51.4%0.0
IN06A103 (R)3GABA40.51.4%0.5
IN17A029 (L)1ACh401.4%0.0
IN06A003 (L)2GABA391.4%0.2
IN08B006 (R)1ACh33.51.2%0.0
IN17A035 (L)1ACh32.51.1%0.0
SApp202ACh32.51.1%0.9
IN12A053_c (L)2ACh30.51.1%0.0
IN07B079 (R)5ACh281.0%0.6
IN19B056 (L)3ACh281.0%0.5
IN03B053 (L)2GABA270.9%0.2
IN07B093 (R)1ACh26.50.9%0.0
IN11B001 (R)2ACh26.50.9%0.9
IN03B058 (L)8GABA260.9%0.7
IN17B001 (R)1GABA23.50.8%0.0
IN12A053_c (R)2ACh220.8%0.3
IN12A018 (L)2ACh220.8%0.1
IN07B073_c (R)1ACh210.7%0.0
IN17A029 (R)1ACh190.7%0.0
IN12A036 (L)4ACh18.50.6%0.9
IN12B015 (R)1GABA170.6%0.0
GFC2 (L)2ACh160.6%0.0
IN19B077 (R)2ACh15.50.5%0.2
IN03B055 (R)3GABA15.50.5%0.7
IN06B066 (R)6GABA150.5%0.6
IN07B083_d (R)1ACh130.5%0.0
dMS10 (L)1ACh130.5%0.0
dMS10 (R)1ACh130.5%0.0
IN02A004 (L)1Glu12.50.4%0.0
vMS12_c (R)2ACh12.50.4%0.5
dPR1 (R)1ACh120.4%0.0
IN07B100 (R)2ACh11.50.4%0.2
IN06A003 (R)2GABA11.50.4%0.7
IN19B090 (R)3ACh11.50.4%0.6
IN06B047 (R)5GABA110.4%0.9
IN03B058 (R)5GABA110.4%0.5
IN19B056 (R)2ACh10.50.4%0.9
IN08A011 (R)4Glu10.50.4%0.7
dMS5 (R)1ACh90.3%0.0
IN07B073_a (R)3ACh90.3%0.6
IN11A030 (L)2ACh8.50.3%0.5
IN12A018 (R)1ACh8.50.3%0.0
IN11A011 (L)1ACh80.3%0.0
IN17A030 (L)1ACh7.50.3%0.0
dPR1 (L)1ACh70.2%0.0
IN19B031 (L)1ACh70.2%0.0
dMS2 (L)3ACh6.50.2%1.1
IN11A019 (L)2ACh6.50.2%0.1
IN12A055 (L)1ACh60.2%0.0
IN10B006 (R)1ACh60.2%0.0
IN06B030 (R)2GABA60.2%0.3
vMS11 (L)4Glu60.2%1.2
IN18B035 (R)1ACh5.50.2%0.0
IN18B034 (L)1ACh5.50.2%0.0
IN08B078 (R)2ACh5.50.2%0.8
AN27X015 (L)1Glu50.2%0.0
IN12A036 (R)3ACh50.2%0.8
IN00A022 (M)2GABA50.2%0.4
IN06B050 (R)2GABA50.2%0.4
IN19B031 (R)1ACh4.50.2%0.0
IN03B045 (L)1unc4.50.2%0.0
EA06B010 (R)1Glu4.50.2%0.0
GFC4 (L)2ACh4.50.2%0.8
dMS5 (L)1ACh4.50.2%0.0
IN17A082, IN17A086 (L)2ACh4.50.2%0.1
DNg02_d (L)1ACh40.1%0.0
DNg105 (R)1GABA40.1%0.0
IN12B015 (L)1GABA40.1%0.0
TN1c_c (L)2ACh40.1%0.2
SNpp143ACh40.1%0.5
IN07B073_a (L)1ACh3.50.1%0.0
IN19B077 (L)2ACh3.50.1%0.1
IN17A045 (L)1ACh3.50.1%0.0
AN02A001 (L)1Glu3.50.1%0.0
IN08B051_e (R)1ACh30.1%0.0
IN17A032 (L)1ACh30.1%0.0
IN18B034 (R)1ACh30.1%0.0
IN06B069 (R)2GABA30.1%0.7
IN06B036 (R)2GABA30.1%0.7
IN17A030 (R)1ACh30.1%0.0
AN27X015 (R)1Glu30.1%0.0
IN03B071 (L)3GABA30.1%0.7
IN06B059 (R)2GABA30.1%0.7
IN08B051_d (L)2ACh30.1%0.3
IN19B095 (L)1ACh2.50.1%0.0
TN1c_d (L)1ACh2.50.1%0.0
IN18B035 (L)1ACh2.50.1%0.0
IN03B015 (L)1GABA2.50.1%0.0
IN06A103 (L)1GABA2.50.1%0.0
DNg17 (R)1ACh2.50.1%0.0
DNg74_a (R)1GABA2.50.1%0.0
IN19A032 (L)2ACh2.50.1%0.6
i1 MN (L)1ACh2.50.1%0.0
IN07B054 (L)2ACh2.50.1%0.2
IN12A044 (L)2ACh2.50.1%0.6
SApp19,SApp214ACh2.50.1%0.3
IN06B018 (R)1GABA20.1%0.0
IN17A103 (L)1ACh20.1%0.0
IN18B049 (R)1ACh20.1%0.0
IN06B070 (R)1GABA20.1%0.0
IN06B035 (L)1GABA20.1%0.0
INXXX355 (L)1GABA20.1%0.0
IN10B006 (L)1ACh20.1%0.0
IN12A010 (L)1ACh20.1%0.0
IN07B075 (R)1ACh20.1%0.0
AN19B022 (R)1ACh20.1%0.0
AN06B023 (R)1GABA20.1%0.0
DNg17 (L)1ACh20.1%0.0
vMS12_d (L)2ACh20.1%0.5
vMS16 (R)1unc20.1%0.0
IN19B094 (R)2ACh20.1%0.0
IN07B073_b (R)1ACh20.1%0.0
IN06B053 (R)2GABA20.1%0.0
IN07B081 (R)2ACh20.1%0.0
vMS11 (R)2Glu20.1%0.5
IN11A035 (L)1ACh1.50.1%0.0
IN12A055 (R)1ACh1.50.1%0.0
IN17A116 (L)1ACh1.50.1%0.0
IN06B080 (R)1GABA1.50.1%0.0
vMS12_e (L)1ACh1.50.1%0.0
vMS12_b (R)1ACh1.50.1%0.0
SNppxx1ACh1.50.1%0.0
IN12A006 (L)1ACh1.50.1%0.0
DNd03 (L)1Glu1.50.1%0.0
IN08B051_e (L)1ACh1.50.1%0.0
IN08B051_c (L)1ACh1.50.1%0.0
IN13A022 (L)1GABA1.50.1%0.0
IN06B017 (R)1GABA1.50.1%0.0
IN12A001 (L)1ACh1.50.1%0.0
ANXXX002 (R)1GABA1.50.1%0.0
DNge152 (M)1unc1.50.1%0.0
DNp73 (R)1ACh1.50.1%0.0
IN12A042 (L)2ACh1.50.1%0.3
IN08B068 (R)2ACh1.50.1%0.3
IN08B006 (L)1ACh1.50.1%0.0
DNge150 (M)1unc1.50.1%0.0
IN17A114 (L)1ACh1.50.1%0.0
IN08B051_d (R)2ACh1.50.1%0.3
IN19B070 (L)1ACh1.50.1%0.0
IN06B052 (L)2GABA1.50.1%0.3
IN06B058 (R)2GABA1.50.1%0.3
IN18B038 (R)2ACh1.50.1%0.3
b3 MN (L)1unc1.50.1%0.0
SApp103ACh1.50.1%0.0
IN06B064 (R)1GABA10.0%0.0
IN18B020 (R)1ACh10.0%0.0
IN17A115 (L)1ACh10.0%0.0
IN17A110 (L)1ACh10.0%0.0
IN18B046 (L)1ACh10.0%0.0
IN19B047 (R)1ACh10.0%0.0
TN1a_c (R)1ACh10.0%0.0
IN08B051_b (R)1ACh10.0%0.0
INXXX029 (L)1ACh10.0%0.0
vMS16 (L)1unc10.0%0.0
IN03B083 (L)1GABA10.0%0.0
IN11A044 (L)1ACh10.0%0.0
IN11A044 (R)1ACh10.0%0.0
SNpp251ACh10.0%0.0
IN07B077 (R)1ACh10.0%0.0
IN12A052_a (L)1ACh10.0%0.0
IN12A057_a (L)1ACh10.0%0.0
IN27X003 (L)1unc10.0%0.0
IN19B070 (R)1ACh10.0%0.0
IN19A142 (L)1GABA10.0%0.0
DLMn c-f (L)1unc10.0%0.0
AN00A002 (M)1GABA10.0%0.0
EA06B010 (L)1Glu10.0%0.0
DNg12_b (L)1ACh10.0%0.0
AN19B001 (R)1ACh10.0%0.0
DNpe009 (L)1ACh10.0%0.0
DNg02_f (L)1ACh10.0%0.0
DNg73 (R)1ACh10.0%0.0
DNg32 (R)1ACh10.0%0.0
IN00A047 (M)2GABA10.0%0.0
IN11B021_b (L)2GABA10.0%0.0
IN19B095 (R)2ACh10.0%0.0
AN19B028 (R)1ACh10.0%0.0
IN12A044 (R)1ACh0.50.0%0.0
IN03B077 (L)1GABA0.50.0%0.0
IN02A010 (L)1Glu0.50.0%0.0
IN11B024_c (R)1GABA0.50.0%0.0
IN11B022_a (L)1GABA0.50.0%0.0
IN00A039 (M)1GABA0.50.0%0.0
IN03B064 (L)1GABA0.50.0%0.0
IN17A102 (L)1ACh0.50.0%0.0
IN17A108 (R)1ACh0.50.0%0.0
IN17A119 (R)1ACh0.50.0%0.0
IN17A091 (L)1ACh0.50.0%0.0
IN17A108 (L)1ACh0.50.0%0.0
IN17A104 (L)1ACh0.50.0%0.0
IN11B025 (L)1GABA0.50.0%0.0
SNpp131ACh0.50.0%0.0
IN19B084 (L)1ACh0.50.0%0.0
IN03B069 (L)1GABA0.50.0%0.0
IN19B094 (L)1ACh0.50.0%0.0
IN12A059_e (L)1ACh0.50.0%0.0
IN00A044 (M)1GABA0.50.0%0.0
vMS12_e (R)1ACh0.50.0%0.0
IN08B083_c (R)1ACh0.50.0%0.0
IN19B086 (L)1ACh0.50.0%0.0
IN19B041 (L)1ACh0.50.0%0.0
vMS12_d (R)1ACh0.50.0%0.0
IN18B042 (L)1ACh0.50.0%0.0
IN03B053 (R)1GABA0.50.0%0.0
IN00A001 (M)1unc0.50.0%0.0
IN17A034 (L)1ACh0.50.0%0.0
IN03B008 (R)1unc0.50.0%0.0
IN03B008 (L)1unc0.50.0%0.0
EA27X006 (L)1unc0.50.0%0.0
INXXX008 (R)1unc0.50.0%0.0
INXXX355 (R)1GABA0.50.0%0.0
IN12A030 (L)1ACh0.50.0%0.0
IN06B054 (R)1GABA0.50.0%0.0
IN18B032 (R)1ACh0.50.0%0.0
IN12A012 (L)1GABA0.50.0%0.0
IN06B035 (R)1GABA0.50.0%0.0
IN19B008 (L)1ACh0.50.0%0.0
DNge093 (R)1ACh0.50.0%0.0
AN23B002 (R)1ACh0.50.0%0.0
AN17B002 (L)1GABA0.50.0%0.0
IN11A040 (L)1ACh0.50.0%0.0
IN11B009 (R)1GABA0.50.0%0.0
IN03B088 (L)1GABA0.50.0%0.0
IN11B018 (L)1GABA0.50.0%0.0
IN18B020 (L)1ACh0.50.0%0.0
IN03B081 (L)1GABA0.50.0%0.0
IN12A058 (L)1ACh0.50.0%0.0
IN06A076_b (R)1GABA0.50.0%0.0
IN11B003 (L)1ACh0.50.0%0.0
IN12A058 (R)1ACh0.50.0%0.0
IN12A059_f (R)1ACh0.50.0%0.0
IN06B080 (L)1GABA0.50.0%0.0
IN08B037 (R)1ACh0.50.0%0.0
IN06A086 (R)1GABA0.50.0%0.0
IN06B074 (R)1GABA0.50.0%0.0
IN19B067 (L)1ACh0.50.0%0.0
IN17A071, IN17A081 (L)1ACh0.50.0%0.0
IN07B048 (R)1ACh0.50.0%0.0
IN08B085_a (R)1ACh0.50.0%0.0
IN06B036 (L)1GABA0.50.0%0.0
IN07B047 (L)1ACh0.50.0%0.0
IN03B057 (L)1GABA0.50.0%0.0
dMS2 (R)1ACh0.50.0%0.0
IN11B014 (L)1GABA0.50.0%0.0
IN19B090 (L)1ACh0.50.0%0.0
IN06A006 (L)1GABA0.50.0%0.0
IN17A040 (L)1ACh0.50.0%0.0
IN17A032 (R)1ACh0.50.0%0.0
vMS12_a (L)1ACh0.50.0%0.0
IN12A052_b (L)1ACh0.50.0%0.0
IN12A008 (L)1ACh0.50.0%0.0
IN02A008 (L)1Glu0.50.0%0.0
IN03A005 (R)1ACh0.50.0%0.0
IN18B045_a (L)1ACh0.50.0%0.0
IN11A001 (R)1GABA0.50.0%0.0
AN27X008 (L)1HA0.50.0%0.0
DNg02_c (L)1ACh0.50.0%0.0
AN07B082_a (L)1ACh0.50.0%0.0
AN18B053 (R)1ACh0.50.0%0.0
DNg02_d (R)1ACh0.50.0%0.0
DNge138 (M)1unc0.50.0%0.0
IN01A020 (L)1ACh0.50.0%0.0
DNg108 (R)1GABA0.50.0%0.0

Outputs

downstream
partner
#NTconns
IN06A003
%
Out
CV
b3 MN (L)1unc362.520.9%0.0
IN11B001 (L)3ACh34219.7%0.2
i1 MN (L)1ACh24314.0%0.0
IN11B001 (R)3ACh1428.2%0.9
vMS12_a (L)3ACh694.0%0.5
b3 MN (R)1unc61.53.5%0.0
dMS2 (L)8ACh44.52.6%1.1
IN06A003 (L)2GABA392.3%0.2
vMS12_a (R)3ACh36.52.1%0.7
IN03B064 (L)4GABA362.1%0.6
vMS12_b (L)1ACh31.51.8%0.0
i1 MN (R)1ACh311.8%0.0
IN11B003 (L)2ACh301.7%0.0
IN11B003 (R)2ACh25.51.5%0.5
dMS2 (R)6ACh23.51.4%1.3
IN06A003 (R)2GABA140.8%0.4
IN06B052 (R)2GABA13.50.8%0.8
vMS12_e (L)1ACh10.50.6%0.0
IN06B050 (R)2GABA100.6%0.8
IN06B066 (L)2GABA90.5%0.6
i2 MN (L)1ACh8.50.5%0.0
AN08B047 (L)2ACh8.50.5%0.5
IN11A001 (R)1GABA80.5%0.0
IN03B077 (L)4GABA80.5%0.6
MNhm42 (L)1unc6.50.4%0.0
vMS12_e (R)1ACh60.3%0.0
IN12A044 (L)1ACh60.3%0.0
vMS12_c (L)2ACh50.3%0.6
vMS12_d (L)1ACh3.50.2%0.0
ps2 MN (R)1unc30.2%0.0
IN11A001 (L)1GABA30.2%0.0
IN03B058 (R)3GABA30.2%0.7
IN03B058 (L)4GABA30.2%0.6
ps2 MN (L)1unc2.50.1%0.0
IN12A044 (R)2ACh2.50.1%0.6
IN03B001 (L)1ACh2.50.1%0.0
IN08B051_d (L)2ACh2.50.1%0.2
MNhm42 (R)1unc20.1%0.0
IN06B036 (R)2GABA20.1%0.5
IN17A029 (L)1ACh20.1%0.0
IN06B043 (L)3GABA20.1%0.4
vMS12_b (R)1ACh1.50.1%0.0
IN19B023 (R)1ACh1.50.1%0.0
i2 MN (R)1ACh1.50.1%0.0
AN08B047 (R)1ACh1.50.1%0.0
IN11B024_b (L)1GABA1.50.1%0.0
IN06B043 (R)2GABA1.50.1%0.3
vMS12_c (R)2ACh1.50.1%0.3
IN17A030 (R)1ACh1.50.1%0.0
IN17A030 (L)1ACh1.50.1%0.0
IN08B051_d (R)2ACh1.50.1%0.3
IN11B022_a (L)1GABA10.1%0.0
IN03B073 (L)1GABA10.1%0.0
IN08A011 (L)1Glu10.1%0.0
IN07B048 (R)1ACh10.1%0.0
IN19B037 (R)1ACh10.1%0.0
w-cHIN (R)1ACh10.1%0.0
ps1 MN (L)1unc10.1%0.0
tp2 MN (R)1unc10.1%0.0
IN11B004 (L)1GABA10.1%0.0
MNnm09 (L)1unc10.1%0.0
IN11B024_a (R)1GABA10.1%0.0
IN19B043 (L)1ACh10.1%0.0
IN19B034 (L)1ACh10.1%0.0
IN19B023 (L)1ACh10.1%0.0
hg1 MN (R)1ACh10.1%0.0
IN03B022 (L)1GABA10.1%0.0
vPR9_a (M)2GABA10.1%0.0
IN11B025 (L)2GABA10.1%0.0
IN08B051_e (L)1ACh10.1%0.0
vMS12_d (R)2ACh10.1%0.0
hg4 MN (L)1unc10.1%0.0
IN11B022_b (L)1GABA0.50.0%0.0
IN17A048 (L)1ACh0.50.0%0.0
IN11A030 (L)1ACh0.50.0%0.0
IN19B043 (R)1ACh0.50.0%0.0
IN00A022 (M)1GABA0.50.0%0.0
IN08B035 (R)1ACh0.50.0%0.0
IN11B024_c (R)1GABA0.50.0%0.0
IN03B091 (R)1GABA0.50.0%0.0
IN19B047 (L)1ACh0.50.0%0.0
SNpp271ACh0.50.0%0.0
IN03B055 (L)1GABA0.50.0%0.0
IN03B057 (L)1GABA0.50.0%0.0
IN17A103 (L)1ACh0.50.0%0.0
IN03B065 (L)1GABA0.50.0%0.0
IN12A052_a (L)1ACh0.50.0%0.0
IN02A037 (R)1Glu0.50.0%0.0
SNpp261ACh0.50.0%0.0
IN12A057_a (L)1ACh0.50.0%0.0
IN08B085_a (R)1ACh0.50.0%0.0
IN12A059_e (L)1ACh0.50.0%0.0
IN11A011 (L)1ACh0.50.0%0.0
IN11B014 (L)1GABA0.50.0%0.0
IN19B094 (L)1ACh0.50.0%0.0
IN11B024_c (L)1GABA0.50.0%0.0
IN11A021 (L)1ACh0.50.0%0.0
vMS11 (R)1Glu0.50.0%0.0
vPR6 (L)1ACh0.50.0%0.0
w-cHIN (L)1ACh0.50.0%0.0
IN03B067 (L)1GABA0.50.0%0.0
IN17A035 (L)1ACh0.50.0%0.0
IN17A029 (R)1ACh0.50.0%0.0
tp2 MN (L)1unc0.50.0%0.0
IN12A012 (L)1GABA0.50.0%0.0
IN06B013 (R)1GABA0.50.0%0.0
IN08B006 (L)1ACh0.50.0%0.0
hg1 MN (L)1ACh0.50.0%0.0
AN08B061 (L)1ACh0.50.0%0.0
SApp101ACh0.50.0%0.0
SApp201ACh0.50.0%0.0
SApp19,SApp211ACh0.50.0%0.0
AN08B074 (L)1ACh0.50.0%0.0
IN12A055 (L)1ACh0.50.0%0.0
IN11B009 (L)1GABA0.50.0%0.0
IN07B093 (R)1ACh0.50.0%0.0
IN06B052 (L)1GABA0.50.0%0.0
IN19B056 (R)1ACh0.50.0%0.0
IN03B072 (L)1GABA0.50.0%0.0
IN11B013 (L)1GABA0.50.0%0.0
IN12A052_a (R)1ACh0.50.0%0.0
IN08B039 (R)1ACh0.50.0%0.0
IN06B038 (R)1GABA0.50.0%0.0
IN17B001 (R)1GABA0.50.0%0.0
IN17A032 (R)1ACh0.50.0%0.0
IN19B013 (R)1ACh0.50.0%0.0
IN19B034 (R)1ACh0.50.0%0.0
tp1 MN (L)1unc0.50.0%0.0
ADNM1 MN (R)1unc0.50.0%0.0
MNnm13 (L)1unc0.50.0%0.0
IN08B006 (R)1ACh0.50.0%0.0
AN17B002 (R)1GABA0.50.0%0.0
AN06A080 (L)1GABA0.50.0%0.0
AN06A062 (L)1GABA0.50.0%0.0
ANXXX023 (L)1ACh0.50.0%0.0
AN06A017 (L)1GABA0.50.0%0.0