Male CNS – Cell Type Explorer

IN01B066(R)[T2]{01B}

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
312
Total Synapses
Post: 124 | Pre: 188
log ratio : 0.60
312
Mean Synapses
Post: 124 | Pre: 188
log ratio : 0.60
GABA(89.8% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (2 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
LegNp(T1)(R)12399.2%0.61188100.0%
mVAC(T1)(R)10.8%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
IN01B066
%
In
CV
IN20A.22A085 (R)4ACh1513.3%0.5
IN12B013 (L)1GABA1210.6%0.0
IN13B005 (L)1GABA119.7%0.0
IN13A003 (R)1GABA87.1%0.0
AN07B015 (L)1ACh65.3%0.0
IN14A100, IN14A113 (L)1Glu54.4%0.0
IN13B009 (L)1GABA54.4%0.0
IN12B041 (L)1GABA43.5%0.0
IN20A.22A089 (R)1ACh32.7%0.0
IN20A.22A023 (R)1ACh32.7%0.0
IN12B052 (L)1GABA32.7%0.0
DNge147 (R)1ACh32.7%0.0
IN12B084 (L)2GABA32.7%0.3
IN12B074 (L)1GABA21.8%0.0
IN12B078 (L)1GABA21.8%0.0
IN26X002 (L)1GABA21.8%0.0
IN09B008 (L)1Glu21.8%0.0
IN16B033 (R)1Glu21.8%0.0
DNpe002 (R)1ACh21.8%0.0
AN07B106 (L)1ACh21.8%0.0
IN01A078 (L)1ACh10.9%0.0
IN20A.22A012 (R)1ACh10.9%0.0
IN04B013 (R)1ACh10.9%0.0
IN21A018 (R)1ACh10.9%0.0
IN13B018 (L)1GABA10.9%0.0
IN14A078 (L)1Glu10.9%0.0
SNta401ACh10.9%0.0
IN03A017 (R)1ACh10.9%0.0
IN12B034 (L)1GABA10.9%0.0
IN07B010 (R)1ACh10.9%0.0
IN01B003 (R)1GABA10.9%0.0
IN07B029 (L)1ACh10.9%0.0
IN16B042 (R)1Glu10.9%0.0
IN21A011 (R)1Glu10.9%0.0
INXXX045 (R)1unc10.9%0.0
IN17A020 (R)1ACh10.9%0.0
DNp56 (R)1ACh10.9%0.0
ANXXX013 (R)1GABA10.9%0.0

Outputs

downstream
partner
#NTconns
IN01B066
%
Out
CV
IN08A007 (R)1Glu4511.8%0.0
IN03A039 (R)2ACh287.3%0.0
IN12B034 (L)1GABA277.1%0.0
IN07B029 (L)1ACh256.6%0.0
IN17A022 (R)1ACh153.9%0.0
IN03A046 (R)2ACh153.9%0.9
IN16B042 (R)2Glu143.7%0.3
IN23B028 (R)1ACh112.9%0.0
IN14A037 (L)1Glu102.6%0.0
IN08B001 (R)1ACh102.6%0.0
IN12B037_d (L)1GABA102.6%0.0
IN09A003 (R)1GABA82.1%0.0
IN17A020 (R)1ACh82.1%0.0
IN13A012 (R)1GABA82.1%0.0
IN20A.22A085 (R)3ACh82.1%0.5
IN21A011 (R)1Glu71.8%0.0
IN03A062_a (R)1ACh61.6%0.0
IN16B033 (R)1Glu61.6%0.0
INXXX003 (R)1GABA61.6%0.0
IN14A064 (L)1Glu51.3%0.0
IN03A020 (R)1ACh51.3%0.0
IN14A011 (L)1Glu51.3%0.0
AN09B003 (L)1ACh51.3%0.0
AN09B014 (L)1ACh51.3%0.0
IN19A022 (R)1GABA41.0%0.0
AN08B005 (R)1ACh41.0%0.0
IN14A110 (L)1Glu30.8%0.0
IN14A035 (L)1Glu30.8%0.0
IN16B045 (R)1Glu30.8%0.0
INXXX110 (R)1GABA30.8%0.0
IN05B010 (L)1GABA30.8%0.0
AN17A003 (R)1ACh30.8%0.0
IN01A077 (L)1ACh20.5%0.0
IN14A033 (L)1Glu20.5%0.0
IN20A.22A007 (R)1ACh20.5%0.0
IN16B076 (R)1Glu20.5%0.0
IN01B044_b (R)1GABA20.5%0.0
IN14A081 (L)1Glu20.5%0.0
IN03A062_c (R)1ACh20.5%0.0
IN13A021 (R)1GABA20.5%0.0
IN23B022 (R)1ACh20.5%0.0
IN14B001 (R)1GABA20.5%0.0
IN07B008 (R)1Glu20.5%0.0
AN04B004 (R)1ACh20.5%0.0
AN06A015 (R)1GABA20.5%0.0
AN09B002 (R)1ACh20.5%0.0
IN14A100, IN14A113 (L)2Glu20.5%0.0
INXXX003 (L)1GABA10.3%0.0
IN01A012 (L)1ACh10.3%0.0
IN20A.22A069 (R)1ACh10.3%0.0
IN23B013 (R)1ACh10.3%0.0
IN03A024 (R)1ACh10.3%0.0
IN12B043 (L)1GABA10.3%0.0
IN11A005 (R)1ACh10.3%0.0
IN03A062_b (R)1ACh10.3%0.0
IN01A085 (L)1ACh10.3%0.0
IN14A050 (L)1Glu10.3%0.0
IN13B044 (L)1GABA10.3%0.0
IN03A027 (R)1ACh10.3%0.0
IN14A004 (L)1Glu10.3%0.0
IN03A017 (R)1ACh10.3%0.0
IN13A037 (R)1GABA10.3%0.0
IN17A028 (R)1ACh10.3%0.0
IN14A009 (L)1Glu10.3%0.0
IN03A019 (R)1ACh10.3%0.0
INXXX045 (R)1unc10.3%0.0
IN03B016 (R)1GABA10.3%0.0
DNpe002 (R)1ACh10.3%0.0
IN14A002 (L)1Glu10.3%0.0
IN21A019 (R)1Glu10.3%0.0
INXXX464 (R)1ACh10.3%0.0
AN10B046 (R)1ACh10.3%0.0
AN17A015 (R)1ACh10.3%0.0
AN09B006 (L)1ACh10.3%0.0
AN09B026 (R)1ACh10.3%0.0
AN09B060 (L)1ACh10.3%0.0
AN19B015 (R)1ACh10.3%0.0
AN04B003 (R)1ACh10.3%0.0
AN17A002 (R)1ACh10.3%0.0
ANXXX027 (L)1ACh10.3%0.0