Male CNS – Cell Type Explorer

HRN_VP5(L)

12
Total Neurons
Right: 8 | Left: 4
log ratio : -1.00
999
Total Synapses
Post: 407 | Pre: 592
log ratio : 0.54
249.8
Mean Synapses
Post: 101.8 | Pre: 148
log ratio : 0.54
ACh(93.2% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (2 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
AL(L)40599.5%0.55592100.0%
CentralBrain-unspecified20.5%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
HRN_VP5
%
In
CV
lLN2F_a (L)2unc13.222.5%0.7
lLN2X04 (L)2ACh9.816.5%0.2
lLN2F_b (L)2GABA6.511.0%0.4
HRN_VP54ACh4.27.2%0.3
lLN2P_c (L)3GABA46.8%1.0
l2LN22 (L)1unc35.1%0.0
lLN1_a (L)1ACh2.84.7%0.0
lLN2X11 (L)2ACh2.54.2%0.6
lLN2T_a (L)2ACh2.23.8%0.3
lLN1_bc (L)3ACh2.23.8%0.7
lLN2T_b (L)2ACh23.4%0.5
VP5+VP3_l2PN (L)1ACh1.22.1%0.0
lLN2X05 (L)2ACh1.22.1%0.6
v2LN38 (L)1ACh11.7%0.0
v2LN4 (R)1ACh0.81.3%0.0
vLN24 (L)1ACh0.81.3%0.0
lLN2X12 (L)1ACh0.20.4%0.0
PPM1201 (L)1DA0.20.4%0.0
v2LN38 (R)1ACh0.20.4%0.0
l2LN23 (L)1GABA0.20.4%0.0
VP3+_l2PN (L)1ACh0.20.4%0.0
M_l2PN10t19 (L)1ACh0.20.4%0.0

Outputs

downstream
partner
#NTconns
HRN_VP5
%
Out
CV
v2LN38 (R)2ACh5716.1%0.2
VP5+VP3_l2PN (L)1ACh43.212.2%0.0
VP3+_l2PN (L)2ACh318.8%1.0
lLN2F_a (L)2unc24.87.0%0.5
v2LN38 (L)2ACh21.26.0%0.3
lLN2X04 (L)2ACh215.9%0.2
DNb05 (L)1ACh16.54.7%0.0
VP5+Z_adPN (L)1ACh154.2%0.0
v2LN4 (L)3ACh133.7%0.4
lLN2T_b (L)2ACh123.4%0.3
VP1m+VP5_ilPN (L)1ACh10.83.0%0.0
VP1m+VP5_ilPN (R)1ACh10.83.0%0.0
M_lv2PN9t49_a (L)1GABA7.82.2%0.0
lLN2T_a (L)2ACh6.21.8%0.4
lLN2F_b (L)2GABA6.21.8%0.1
HRN_VP53ACh4.21.2%0.6
M_adPNm3 (L)1ACh41.1%0.0
lLN2X11 (L)2ACh3.51.0%0.4
MZ_lv2PN (L)1GABA3.20.9%0.0
lLN2P_c (L)3GABA2.80.8%1.0
CB1048 (L)3Glu2.50.7%0.4
lLN1_a (L)1ACh2.50.7%0.0
M_l2PNm17 (L)1ACh2.20.6%0.0
l2LN22 (L)1unc2.20.6%0.0
TRN_VP1m3ACh2.20.6%0.5
ALON1 (L)1ACh2.20.6%0.0
M_l2PN10t19 (L)2ACh2.20.6%0.8
CB0650 (L)2Glu1.80.5%0.7
M_l2PNm14 (L)1ACh1.50.4%0.0
VP2_adPN (L)1ACh1.20.4%0.0
M_l2PNl22 (L)1ACh1.20.4%0.0
v2LN4 (R)3ACh1.20.4%0.6
CB1545 (L)1Glu10.3%0.0
M_l2PNl20 (L)1ACh10.3%0.0
lLN2X05 (L)2ACh10.3%0.0
lLN1_bc (L)2ACh10.3%0.5
ALON2 (L)1ACh10.3%0.0
lLN2P_a (L)2GABA10.3%0.5
l2LN19 (L)1GABA0.80.2%0.0
VP3+VP1l_ivPN (R)1ACh0.80.2%0.0
VP1m+VP2_lvPN2 (L)2ACh0.80.2%0.3
GNG141 (L)1unc0.50.1%0.0
VP1d+VP4_l2PN2 (L)1ACh0.50.1%0.0
M_lv2PN9t49_b (L)1GABA0.50.1%0.0
l2LN21 (L)1GABA0.50.1%0.0
VP4+VL1_l2PN (L)1ACh0.50.1%0.0
HRN_VP1l2ACh0.50.1%0.0
lLN2X12 (L)2ACh0.50.1%0.0
M_lPNm11A (L)1ACh0.20.1%0.0
v2LN50 (L)1Glu0.20.1%0.0
AL-AST1 (L)1ACh0.20.1%0.0
M_l2PNm16 (L)1ACh0.20.1%0.0
VP2+_adPN (L)1ACh0.20.1%0.0
VP1m+_lvPN (L)1Glu0.20.1%0.0
l2LN23 (L)1GABA0.20.1%0.0
vLN24 (L)1ACh0.20.1%0.0
VP4+VL1_l2PN (R)1ACh0.20.1%0.0
lLN12A (L)1ACh0.20.1%0.0
M_l2PN10t19 (R)1ACh0.20.1%0.0
SLP238 (L)1ACh0.20.1%0.0
M_imPNl92 (R)1ACh0.20.1%0.0
v2LN34C (L)1ACh0.20.1%0.0
v2LN34A (L)1Glu0.20.1%0.0
lLN2P_b (L)1GABA0.20.1%0.0