Male CNS – Cell Type Explorer

HRN_VP1l(R)

8
Total Neurons
Right: 6 | Left: 2
log ratio : -1.58
3,742
Total Synapses
Post: 2,212 | Pre: 1,530
log ratio : -0.53
623.7
Mean Synapses
Post: 368.7 | Pre: 255
log ratio : -0.53
ACh(91.0% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (3 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
AL(R)2,20999.9%-0.531,52999.9%
CentralBrain-unspecified20.1%-1.0010.1%
LAL(R)10.0%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
HRN_VP1l
%
In
CV
HRN_VP1l6ACh75.223.6%0.2
lLN2F_a (R)2unc68.321.5%0.2
lLN2F_b (R)2GABA55.217.4%0.1
lLN2X12 (R)5ACh24.77.8%0.1
lLN2R_a (R)3GABA19.26.0%0.3
lLN2X11 (R)2ACh185.7%0.0
lLN2P_b (R)4GABA12.53.9%0.4
lLN2X05 (R)2ACh10.53.3%0.6
lLN1_bc (R)14ACh9.53.0%0.5
lLN2T_c (R)2ACh3.31.0%0.9
lLN2T_a (R)2ACh20.6%0.5
HRN_VP1d3ACh20.6%0.9
OA-VUMa2 (M)2OA20.6%0.3
TRN_VP3b1ACh1.70.5%0.0
ORN_V6ACh1.30.4%0.6
VP1l+VP3_ilPN (L)1ACh1.20.4%0.0
lLN2X04 (R)2ACh1.20.4%0.4
VP1l+VP3_ilPN (R)1ACh0.80.3%0.0
l2LN22 (R)1unc0.80.3%0.0
v2LN49 (R)2Glu0.80.3%0.2
v2LN41 (R)2unc0.70.2%0.5
lLN2T_b (R)1ACh0.70.2%0.0
TRN_VP21ACh0.50.2%0.0
VP1d+VP4_l2PN1 (R)1ACh0.50.2%0.0
VP3+VP1l_ivPN (R)1ACh0.50.2%0.0
ALIN5 (L)1GABA0.50.2%0.0
lLN2T_e (R)1ACh0.50.2%0.0
lLN1_a (R)1ACh0.30.1%0.0
M_l2PNl23 (R)1ACh0.30.1%0.0
CSD (L)15-HT0.30.1%0.0
v2LN34F (R)1ACh0.30.1%0.0
M_imPNl92 (R)1ACh0.20.1%0.0
ORN_VA21ACh0.20.1%0.0
M_smPN6t2 (L)1GABA0.20.1%0.0
v2LN41 (L)1unc0.20.1%0.0
M_lPNm13 (R)1ACh0.20.1%0.0
CB1545 (R)1Glu0.20.1%0.0
v2LN38 (R)1ACh0.20.1%0.0
VP3+VP1l_ivPN (L)1ACh0.20.1%0.0
M_l2PNm16 (R)1ACh0.20.1%0.0
ALIN2 (R)1ACh0.20.1%0.0
TRN_VP1m1ACh0.20.1%0.0
HRN_VP41ACh0.20.1%0.0
ORN_VM41ACh0.20.1%0.0
M_lPNm11D (R)1ACh0.20.1%0.0
CSD (R)15-HT0.20.1%0.0

Outputs

downstream
partner
#NTconns
HRN_VP1l
%
Out
CV
VP1l+_lvPN (R)5ACh109.814.4%0.3
HRN_VP1l6ACh75.29.9%0.2
lLN2F_a (R)2unc74.29.7%0.3
lLN2F_b (R)2GABA64.58.5%0.1
VP3+VP1l_ivPN (R)1ACh51.76.8%0.0
VP1l+VP3_ilPN (L)1ACh486.3%0.0
VP1l+VP3_ilPN (R)1ACh46.86.1%0.0
VP3+VP1l_ivPN (L)1ACh45.56.0%0.0
lLN2X12 (R)5ACh32.84.3%0.4
lLN2X11 (R)2ACh28.83.8%0.2
CB3417 (R)4unc23.23.0%0.5
lLN2P_b (R)5GABA20.52.7%0.7
lLN2X05 (R)2ACh162.1%0.7
lLN1_bc (R)15ACh15.82.1%0.8
lLN2R_a (R)3GABA13.21.7%0.4
CB1048 (R)4Glu10.81.4%0.7
l2LN22 (R)2unc9.31.2%0.9
v2LN49 (R)2Glu7.31.0%0.3
v2LN4 (R)3ACh7.20.9%0.5
CB1545 (R)1Glu70.9%0.0
lLN2T_a (R)2ACh6.70.9%0.5
lLN2T_b (R)2ACh6.50.9%0.8
HRN_VP1d7ACh2.80.4%0.8
VP3+_vPN (R)1GABA2.70.3%0.0
lLN2T_c (R)1ACh2.50.3%0.0
lLN2X04 (R)2ACh2.50.3%0.3
DNd04 (R)1Glu20.3%0.0
TRN_VP3b1ACh1.80.2%0.0
v2LN34A (R)2Glu1.80.2%0.5
VP1d+VP4_l2PN1 (R)1ACh1.80.2%0.0
v2LN50 (R)2Glu1.70.2%0.2
lLN2T_e (R)2ACh1.70.2%0.4
VP5+Z_adPN (R)1ACh1.30.2%0.0
OA-VUMa2 (M)1OA1.30.2%0.0
v2LN41 (R)2unc1.20.2%0.4
M_l2PNm17 (R)1ACh1.20.2%0.0
vLN24 (R)2ACh10.1%0.3
lLN2P_c (R)3GABA10.1%0.4
CSD (L)15-HT10.1%0.0
lLN1_a (R)1ACh0.80.1%0.0
VP4+_vPN (R)1GABA0.70.1%0.0
l2LN20 (R)1GABA0.70.1%0.0
M_l2PNm16 (R)2ACh0.70.1%0.5
M_lvPNm24 (R)1ACh0.70.1%0.0
VP3+_l2PN (R)2ACh0.70.1%0.5
M_ilPNm90 (L)1ACh0.70.1%0.0
VP1m+_lvPN (R)1Glu0.50.1%0.0
lLN2P_a (R)2GABA0.50.1%0.3
M_l2PNl23 (R)1ACh0.50.1%0.0
M_lvPNm25 (R)2ACh0.50.1%0.3
ALIN2 (R)1ACh0.50.1%0.0
HRN_VP51ACh0.30.0%0.0
v2LN38 (L)1ACh0.30.0%0.0
v2LN38 (R)1ACh0.30.0%0.0
vLN25 (R)1Glu0.30.0%0.0
CSD (R)15-HT0.30.0%0.0
v2LN41 (L)1unc0.30.0%0.0
vLN26 (R)1unc0.30.0%0.0
ORN_VL12ACh0.30.0%0.0
TRN_VP21ACh0.20.0%0.0
M_imPNl92 (R)1ACh0.20.0%0.0
M_lPNm11A (R)1ACh0.20.0%0.0
M_smPN6t2 (L)1GABA0.20.0%0.0
DNc02 (L)1unc0.20.0%0.0
M_l2PN10t19 (L)1ACh0.20.0%0.0
M_VPNml66 (R)1GABA0.20.0%0.0
M_imPNl92 (L)1ACh0.20.0%0.0
TRN_VP1m1ACh0.20.0%0.0
M_lvPNm35 (L)1ACh0.20.0%0.0
DA4m_adPN (R)1ACh0.20.0%0.0
v2LN34F (R)1ACh0.20.0%0.0
CB2703 (R)1GABA0.20.0%0.0
M_lvPNm37 (R)1ACh0.20.0%0.0
M_lPNm11C (R)1ACh0.20.0%0.0
v2LN3A1_a (R)1ACh0.20.0%0.0
VP1d_il2PN (L)1ACh0.20.0%0.0