Male CNS – Cell Type Explorer

FLA009m(R)

1
Total Neurons
Right: 1 | Left: 0
log ratio : -inf
650
Total Synapses
Post: 367 | Pre: 283
log ratio : -0.37
650
Mean Synapses
Post: 367 | Pre: 283
log ratio : -0.37
ACh(83.4% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (12 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
SMP(R)6517.7%0.328128.6%
FLA(R)10027.2%-3.6482.8%
CentralBrain-unspecified7620.7%-1.86217.4%
SMP(L)3910.6%0.365017.7%
SIP(R)174.6%1.163813.4%
SLP(L)184.9%0.873311.7%
SLP(R)82.2%1.70269.2%
SIP(L)51.4%2.20238.1%
VES(R)256.8%-inf00.0%
PRW102.7%-inf00.0%
AL(R)41.1%-inf00.0%
SCL(R)00.0%inf31.1%

Connectivity

Inputs

upstream
partner
#NTconns
FLA009m
%
In
CV
SMP740 (L)4Glu268.0%0.4
SMP276 (L)1Glu195.9%0.0
FLA020 (L)1Glu154.6%0.0
SMP276 (R)1Glu144.3%0.0
AN05B035 (R)1GABA144.3%0.0
mAL_m8 (L)5GABA144.3%0.5
LNd_c (R)2ACh123.7%0.2
AN09B017a (R)1Glu113.4%0.0
DNpe041 (R)1GABA113.4%0.0
FLA001m (R)2ACh113.4%0.3
ANXXX150 (R)1ACh103.1%0.0
AN09B017d (L)1Glu103.1%0.0
FLA004m (R)3ACh103.1%0.5
LNd_c (L)3ACh92.8%0.7
CB4091 (R)5Glu92.8%0.5
VES206m (R)3ACh82.5%0.5
AN09B017g (L)1Glu61.9%0.0
SMP720m (R)1GABA61.9%0.0
FLA020 (R)1Glu61.9%0.0
mAL_m2b (R)2GABA61.9%0.7
ANXXX150 (L)1ACh51.5%0.0
P1_8b (L)1ACh41.2%0.0
AN05B050_a (L)1GABA41.2%0.0
AN09B017b (L)1Glu41.2%0.0
mAL_m5c (R)2GABA41.2%0.0
P1_12a (R)1ACh30.9%0.0
SLP391 (R)1ACh30.9%0.0
SMP740 (R)1Glu30.9%0.0
GNG640 (R)1ACh30.9%0.0
5-HTPMPD01 (L)15-HT30.9%0.0
P1_3c (L)2ACh30.9%0.3
CB2636 (R)2ACh30.9%0.3
SLP112 (L)1ACh20.6%0.0
AVLP750m (L)1ACh20.6%0.0
mAL_m2a (R)1unc20.6%0.0
LHAV4c2 (R)1GABA20.6%0.0
FLA005m (L)1ACh20.6%0.0
LHAD2c1 (R)1ACh20.6%0.0
mAL_m2b (L)1GABA20.6%0.0
5-HTPMPD01 (R)15-HT20.6%0.0
mAL_m5c (L)1GABA20.6%0.0
mAL_m6 (L)1unc20.6%0.0
SIP025 (R)1ACh20.6%0.0
SMP286 (R)1GABA20.6%0.0
GNG572 (R)1unc20.6%0.0
OA-VPM4 (L)1OA20.6%0.0
FLA004m (L)2ACh20.6%0.0
SMP700m (L)2ACh20.6%0.0
IPC (R)1unc10.3%0.0
PRW004 (M)1Glu10.3%0.0
SMP703m (L)1Glu10.3%0.0
SMP509 (L)1ACh10.3%0.0
SMP107 (L)1Glu10.3%0.0
FLA018 (R)1unc10.3%0.0
CB1024 (R)1ACh10.3%0.0
CB1165 (L)1ACh10.3%0.0
AN09B033 (R)1ACh10.3%0.0
MBON13 (R)1ACh10.3%0.0
SMP203 (R)1ACh10.3%0.0
SIP103m (R)1Glu10.3%0.0
SMP702m (R)1Glu10.3%0.0
CB1026 (R)1unc10.3%0.0
SMP716m (L)1ACh10.3%0.0
PRW075 (L)1ACh10.3%0.0
AN09B017a (L)1Glu10.3%0.0
AN05B102c (L)1ACh10.3%0.0
DSKMP3 (L)1unc10.3%0.0
DNg68 (L)1ACh10.3%0.0
mAL_m5a (L)1GABA10.3%0.0
SIP105m (R)1ACh10.3%0.0

Outputs

downstream
partner
#NTconns
FLA009m
%
Out
CV
AVLP750m (L)2ACh355.5%0.0
DNpe041 (L)1GABA264.1%0.0
DNpe041 (R)1GABA213.3%0.0
SMP171 (R)2ACh213.3%0.3
SMP171 (L)2ACh213.3%0.2
CB4127 (R)3unc193.0%0.5
IPC (R)4unc172.7%0.5
CB4127 (L)3unc162.5%0.1
SMP702m (R)2Glu152.4%0.1
5-HTPMPD01 (R)15-HT142.2%0.0
FLA004m (R)5ACh142.2%0.4
mAL_m3b (L)4unc132.1%0.5
IPC (L)3unc121.9%0.6
AVLP750m (R)1ACh111.7%0.0
SIP100m (R)2Glu111.7%0.1
SMP702m (L)2Glu101.6%0.2
FLA004m (L)4ACh101.6%0.8
SMP179 (L)1ACh91.4%0.0
SIP123m (R)2Glu91.4%0.1
SIP122m (R)3Glu91.4%0.3
SMP538 (R)1Glu81.3%0.0
AVLP029 (R)1GABA81.3%0.0
SIP100m (L)3Glu81.3%0.6
CB4091 (R)3Glu81.3%0.4
5-HTPMPD01 (L)15-HT71.1%0.0
mAL_m3a (L)2unc71.1%0.4
SMP726m (R)3ACh71.1%0.5
SLP024 (R)4Glu71.1%0.5
CB0993 (L)1Glu60.9%0.0
SMP049 (R)1GABA60.9%0.0
mAL_m3a (R)1unc60.9%0.0
pC1x_b (R)1ACh60.9%0.0
FLA005m (R)1ACh60.9%0.0
mAL_m2b (R)1GABA60.9%0.0
SMP172 (R)2ACh60.9%0.7
CB1610 (L)2Glu60.9%0.0
SMP276 (R)1Glu50.8%0.0
AVLP029 (L)1GABA50.8%0.0
FLA005m (L)1ACh50.8%0.0
SMP276 (L)1Glu50.8%0.0
LHCENT9 (R)1GABA50.8%0.0
mAL_m5a (L)1GABA50.8%0.0
SLP025 (L)2Glu50.8%0.6
PAM04 (L)2DA50.8%0.2
CB1352 (R)2Glu50.8%0.2
SIP103m (L)2Glu50.8%0.2
CB4091 (L)3Glu50.8%0.3
SMP729m (R)1Glu40.6%0.0
SMP721m (L)1ACh40.6%0.0
SMP727m (R)1ACh40.6%0.0
CB4128 (L)1unc40.6%0.0
mAL_m3b (R)2unc40.6%0.0
SMP705m (L)2Glu40.6%0.0
mAL_m6 (L)1unc30.5%0.0
SIP119m (L)1Glu30.5%0.0
SMP700m (L)1ACh30.5%0.0
CB0975 (R)1ACh30.5%0.0
CB4123 (R)1Glu30.5%0.0
PRW075 (L)1ACh30.5%0.0
SMP727m (L)1ACh30.5%0.0
CB1610 (R)1Glu30.5%0.0
DSKMP3 (R)1unc30.5%0.0
CB1024 (R)2ACh30.5%0.3
SMP106 (L)2Glu30.5%0.3
SMP703m (L)2Glu30.5%0.3
SMP049 (L)1GABA20.3%0.0
mAL_m3c (L)1GABA20.3%0.0
SLP113 (L)1ACh20.3%0.0
SLP391 (R)1ACh20.3%0.0
SIP103m (R)1Glu20.3%0.0
CB0993 (R)1Glu20.3%0.0
SIP147m (R)1Glu20.3%0.0
CB4128 (R)1unc20.3%0.0
SLP017 (R)1Glu20.3%0.0
CB1379 (R)1ACh20.3%0.0
CB1026 (L)1unc20.3%0.0
AVLP471 (R)1Glu20.3%0.0
SMP740 (R)1Glu20.3%0.0
SMP162 (R)1Glu20.3%0.0
SIP121m (R)1Glu20.3%0.0
SIP122m (L)1Glu20.3%0.0
SLP067 (R)1Glu20.3%0.0
SMP026 (R)1ACh20.3%0.0
DNg70 (R)1GABA20.3%0.0
SIP105m (R)1ACh20.3%0.0
mAL_m6 (R)2unc20.3%0.0
SMP096 (R)2Glu20.3%0.0
CB1024 (L)2ACh20.3%0.0
CB1923 (L)1ACh10.2%0.0
PAM09 (R)1DA10.2%0.0
SMP107 (L)1Glu10.2%0.0
SIP076 (R)1ACh10.2%0.0
SMP503 (R)1unc10.2%0.0
SMP076 (R)1GABA10.2%0.0
SMP483 (R)1ACh10.2%0.0
SMP548 (R)1ACh10.2%0.0
mAL_m4 (L)1GABA10.2%0.0
SMP720m (R)1GABA10.2%0.0
CB1165 (L)1ACh10.2%0.0
CB0405 (R)1GABA10.2%0.0
SMP729m (L)1Glu10.2%0.0
PAM10 (R)1DA10.2%0.0
CB3120 (R)1ACh10.2%0.0
SLP019 (L)1Glu10.2%0.0
CB4110 (R)1ACh10.2%0.0
CB0943 (R)1ACh10.2%0.0
SIP112m (R)1Glu10.2%0.0
SMP107 (R)1Glu10.2%0.0
CB0975 (L)1ACh10.2%0.0
P1_16a (R)1ACh10.2%0.0
LHAD1a4_b (R)1ACh10.2%0.0
CB1008 (L)1ACh10.2%0.0
SLP015_b (R)1Glu10.2%0.0
P1_8c (L)1ACh10.2%0.0
CB4137 (R)1Glu10.2%0.0
SMP726m (L)1ACh10.2%0.0
SLP115 (R)1ACh10.2%0.0
CB1026 (R)1unc10.2%0.0
SMP187 (R)1ACh10.2%0.0
CB1008 (R)1ACh10.2%0.0
SMP740 (L)1Glu10.2%0.0
mAL_m8 (R)1GABA10.2%0.0
SLP149 (R)1ACh10.2%0.0
LHAD3d4 (R)1ACh10.2%0.0
FLA003m (R)1ACh10.2%0.0
SMP538 (L)1Glu10.2%0.0
AVLP728m (R)1ACh10.2%0.0
SMP028 (R)1Glu10.2%0.0
SLP244 (L)1ACh10.2%0.0
aSP-g3Am (L)1ACh10.2%0.0
SMP041 (R)1Glu10.2%0.0
SLP067 (L)1Glu10.2%0.0
SMP169 (R)1ACh10.2%0.0
mAL_m5b (R)1GABA10.2%0.0
SMP550 (L)1ACh10.2%0.0
SLP388 (R)1ACh10.2%0.0
pC1x_b (L)1ACh10.2%0.0
GNG103 (R)1GABA10.2%0.0
AstA1 (L)1GABA10.2%0.0