Male CNS – Cell Type Explorer

ER3p_a

AKA: ER3p (Flywire, CTE-FAFB)

14
Total Neurons
Right: 7 | Left: 7
log ratio : 0.00
19,802
Total Synapses
Right: 10,012 | Left: 9,790
log ratio : -0.03
1,414.4
Mean Synapses
Right: 1,430.3 | Left: 1,398.6
log ratio : -0.03
GABA(81.7% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (7 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
EB13,48592.3%-1.405,10898.4%
BU8826.0%-5.33220.4%
CentralBrain-unspecified2371.6%-2.06571.1%
bL40.0%-0.4230.1%
gL20.0%-inf00.0%
CRE10.0%-inf00.0%
FB10.0%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
ER3p_a
%
In
CV
ER3p_a14GABA517.155.7%0.1
EL18OA232.425.0%0.3
TuBu0511ACh54.65.9%0.3
ER3p_b4GABA39.94.3%0.3
ER3w_b18GABA29.33.2%0.6
ER3m16GABA161.7%0.6
EPG32ACh7.10.8%0.7
ExR325-HT5.80.6%0.0
ER3d_b9GABA4.90.5%1.7
ER3w_c6GABA4.10.4%0.4
ER3w_a7GABA2.80.3%0.6
ER1_a5GABA2.40.3%0.5
PEG1ACh2.20.2%0.0
ER3a_c4GABA1.40.2%0.6
ExR24DA1.10.1%0.1
FB5Q1Glu10.1%0.0
ExR53Glu0.90.1%0.0
PEN_a(PEN1)5ACh0.70.1%0.6
AOTU0464Glu0.70.1%0.4
ER3d_e2GABA0.60.1%0.5
ER2_d4GABA0.60.1%0.3
TuBu041ACh0.40.0%0.0
ER2_b4GABA0.40.0%0.3
PFL31ACh0.30.0%0.0
ER3d_d4GABA0.30.0%0.0
ER1_c2GABA0.20.0%0.0
ER4d3GABA0.20.0%0.0
ER1_b3GABA0.20.0%0.0
ER3a_a3GABA0.20.0%0.0
LAL0751Glu0.10.0%0.0
EPGt1ACh0.10.0%0.0
ER3d_a1GABA0.10.0%0.0
ER3a_d1GABA0.10.0%0.0
ExR11ACh0.10.0%0.0
ER3d_c1GABA0.10.0%0.0
FB4L1DA0.10.0%0.0
CB24691GABA0.10.0%0.0

Outputs

downstream
partner
#NTconns
ER3p_a
%
Out
CV
EPG46ACh637.446.8%0.3
ER3p_a14GABA517.137.9%0.1
EL18OA705.1%0.4
ER3w_b18GABA52.13.8%0.8
ER3p_b4GABA20.61.5%0.4
ER3m17GABA19.31.4%0.6
ER1_a11GABA100.7%0.9
EPGt4ACh9.90.7%0.3
ER3w_c6GABA80.6%0.3
ER3w_a7GABA4.60.3%0.6
ER3d_b10GABA2.10.2%1.1
ER3a_c4GABA20.1%0.5
ER1_b8GABA1.70.1%0.4
ER1_c4GABA1.60.1%0.5
PEG2ACh0.70.1%0.8
ER3d_d5GABA0.60.0%0.3
ER2_b4GABA0.60.0%0.4
PEN_a(PEN1)6ACh0.60.0%0.2
ExR61Glu0.40.0%0.0
ER3d_e2GABA0.40.0%0.0
ER53GABA0.40.0%0.0
TuBu053ACh0.30.0%0.0
ExR52Glu0.20.0%0.0
ER4d1GABA0.10.0%0.0
ER3a_a1GABA0.10.0%0.0
CB24691GABA0.10.0%0.0
ER2_a2GABA0.10.0%0.0
AOTU0382Glu0.10.0%0.0
ExR12ACh0.10.0%0.0
ER2_d2GABA0.10.0%0.0
ExR21DA0.10.0%0.0
ER4m1GABA0.10.0%0.0
LHPV5l11ACh0.10.0%0.0
FB9B_d1Glu0.10.0%0.0
FB7G1Glu0.10.0%0.0
FB5Q1Glu0.10.0%0.0
FB6U1Glu0.10.0%0.0
ER2_c1GABA0.10.0%0.0
ER3d_a1GABA0.10.0%0.0
ER3d_c1GABA0.10.0%0.0