Male CNS – Cell Type Explorer

EN00B001(M)[T2]{00B}

1
Total Neurons
5,148
Total Synapses
Post: 5,068 | Pre: 80
log ratio : -5.99
5,148
Mean Synapses
Post: 5,068 | Pre: 80
log ratio : -5.99
unc(49.9% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (12 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
WTct(UTct-T2)(L)1,54130.4%-7.42911.2%
WTct(UTct-T2)(R)1,50529.7%-6.311923.8%
IntTct1,30625.8%-7.031012.5%
VNC-unspecified2414.8%-6.9122.5%
NTct(UTct-T1)(L)2254.4%-inf00.0%
NTct(UTct-T1)(R)1603.2%-inf00.0%
ANm390.8%-inf00.0%
PDMN(R)230.5%-1.061113.8%
LTct80.2%1.091721.2%
PDMN(L)150.3%-0.74911.2%
ADMN(R)50.1%-2.3211.2%
ADMN(L)00.0%inf22.5%

Connectivity

Inputs

upstream
partner
#NTconns
EN00B001
%
In
CV
IN03B054 (L)3GABA56611.6%0.1
IN03B054 (R)3GABA53911.1%0.1
IN18B026 (R)1ACh3657.5%0.0
DNp48 (R)1ACh3457.1%0.0
IN18B026 (L)1ACh2986.1%0.0
DNp48 (L)1ACh2855.9%0.0
DNg03 (L)6ACh2254.6%0.3
SNpp23125-HT1473.0%1.2
DNg03 (R)6ACh1372.8%0.6
IN00A032 (M)2GABA1362.8%0.1
IN08A040 (L)3Glu1112.3%0.4
IN02A007 (L)1Glu901.9%0.0
IN02A007 (R)1Glu831.7%0.0
IN19B020 (R)1ACh811.7%0.0
IN19B020 (L)1ACh771.6%0.0
IN08A040 (R)2Glu721.5%0.4
IN19B031 (R)1ACh591.2%0.0
SNpp0711ACh591.2%0.6
IN19B031 (L)1ACh460.9%0.0
DNg02_b (L)3ACh420.9%0.4
IN00A043 (M)3GABA400.8%0.7
AN19B024 (R)1ACh390.8%0.0
DNge150 (M)1unc390.8%0.0
SAxx0111ACh380.8%1.0
AN19B024 (L)1ACh350.7%0.0
DNpe037 (R)1ACh340.7%0.0
DNpe053 (R)1ACh320.7%0.0
ANXXX136 (R)1ACh250.5%0.0
DNpe037 (L)1ACh230.5%0.0
ANXXX136 (L)1ACh210.4%0.0
DNge015 (L)1ACh200.4%0.0
DNp54 (L)1GABA200.4%0.0
IN03B055 (L)4GABA200.4%1.0
DNpe036 (R)1ACh190.4%0.0
DNg02_b (R)2ACh180.4%0.1
IN12B016 (R)1GABA170.3%0.0
DNge015 (R)2ACh160.3%0.0
ANXXX202 (R)5Glu160.3%0.5
IN12B016 (L)1GABA150.3%0.0
AN06B031 (R)1GABA150.3%0.0
DNpe036 (L)1ACh150.3%0.0
DNpe035 (L)1ACh150.3%0.0
AN06B031 (L)1GABA140.3%0.0
DNp68 (L)1ACh140.3%0.0
DNpe053 (L)1ACh140.3%0.0
IN12A052_b (L)2ACh140.3%0.1
IN19B041 (R)1ACh120.2%0.0
IN07B026 (R)1ACh110.2%0.0
DNpe033 (R)1GABA110.2%0.0
SNxx322unc110.2%0.8
AN19B028 (L)1ACh100.2%0.0
DNg17 (L)1ACh100.2%0.0
ANXXX202 (L)3Glu100.2%0.6
EN00B015 (M)2unc90.2%0.6
SApp107ACh90.2%0.5
SApp19,SApp214ACh90.2%0.2
IN19B062 (R)1ACh80.2%0.0
DNg17 (R)1ACh80.2%0.0
SNxx282ACh80.2%0.8
SNpp052ACh80.2%0.0
mesVUM-MJ (M)1unc70.1%0.0
IN27X007 (L)1unc70.1%0.0
ANXXX033 (R)1ACh70.1%0.0
AN27X009 (R)1ACh70.1%0.0
IN19B075 (L)2ACh70.1%0.4
IN19B043 (R)2ACh70.1%0.4
DNg02_a (L)3ACh70.1%0.8
IN03B055 (R)4GABA70.1%0.5
MNad21 (R)1unc60.1%0.0
IN19B041 (L)1ACh60.1%0.0
DNg02_g (R)2ACh60.1%0.7
IN19B075 (R)3ACh60.1%0.7
IN19B040 (L)2ACh60.1%0.3
IN18B035 (L)2ACh60.1%0.3
IN19B083 (L)1ACh50.1%0.0
IN19B083 (R)1ACh50.1%0.0
IN07B038 (L)1ACh50.1%0.0
IN07B026 (L)1ACh50.1%0.0
DNpe035 (R)1ACh50.1%0.0
CB0429 (L)1ACh50.1%0.0
AN08B113 (R)2ACh50.1%0.6
DNg02_c (R)2ACh50.1%0.6
DNg02_g (L)2ACh50.1%0.6
INXXX119 (L)1GABA40.1%0.0
IN17A072 (R)1ACh40.1%0.0
EN00B011 (M)1unc40.1%0.0
IN18B035 (R)1ACh40.1%0.0
DNge172 (L)1ACh40.1%0.0
DNpe033 (L)1GABA40.1%0.0
AN19B028 (R)1ACh40.1%0.0
AN27X009 (L)1ACh40.1%0.0
DNp46 (R)1ACh40.1%0.0
DNp54 (R)1GABA40.1%0.0
DNg80 (L)1Glu40.1%0.0
IN12A052_b (R)2ACh40.1%0.5
SNxx242unc40.1%0.5
SNxx3125-HT40.1%0.5
DNg02_a (R)3ACh40.1%0.4
DNge172 (R)2ACh40.1%0.0
dMS5 (R)1ACh30.1%0.0
IN06B070 (R)1GABA30.1%0.0
IN06A039 (L)1GABA30.1%0.0
EN00B008 (M)1unc30.1%0.0
IN19B058 (R)1ACh30.1%0.0
AN27X019 (L)1unc30.1%0.0
IN19B095 (R)1ACh30.1%0.0
INXXX133 (L)1ACh30.1%0.0
INXXX183 (R)1GABA30.1%0.0
dMS10 (R)1ACh30.1%0.0
IN05B003 (R)1GABA30.1%0.0
DNp104 (R)1ACh30.1%0.0
DNge137 (R)1ACh30.1%0.0
IN03B043 (L)2GABA30.1%0.3
IN00A047 (M)3GABA30.1%0.0
IN19B103 (L)1ACh20.0%0.0
IN19B062 (L)1ACh20.0%0.0
IN06B070 (L)1GABA20.0%0.0
IN17A075 (R)1ACh20.0%0.0
IN19B072 (R)1ACh20.0%0.0
IN19B087 (R)1ACh20.0%0.0
IN19B072 (L)1ACh20.0%0.0
IN19B086 (R)1ACh20.0%0.0
IN06B083 (L)1GABA20.0%0.0
IN27X003 (L)1unc20.0%0.0
dMS10 (L)1ACh20.0%0.0
IN19B037 (R)1ACh20.0%0.0
INXXX472 (L)1GABA20.0%0.0
DLMn c-f (R)1unc20.0%0.0
AN27X013 (L)1unc20.0%0.0
DNp46 (L)1ACh20.0%0.0
AN06B090 (R)1GABA20.0%0.0
AN08B113 (L)1ACh20.0%0.0
ANXXX171 (R)1ACh20.0%0.0
ANXXX338 (R)1Glu20.0%0.0
ANXXX139 (R)1GABA20.0%0.0
AN10B015 (L)1ACh20.0%0.0
DNge137 (L)1ACh20.0%0.0
DNp104 (L)1ACh20.0%0.0
DNg27 (L)1Glu20.0%0.0
DNg32 (R)1ACh20.0%0.0
IN19B057 (L)2ACh20.0%0.0
ANXXX169 (R)2Glu20.0%0.0
DNp64 (L)1ACh10.0%0.0
IN19B088 (L)1ACh10.0%0.0
IN19B092 (L)1ACh10.0%0.0
IN17A071, IN17A081 (R)1ACh10.0%0.0
IN19B067 (R)1ACh10.0%0.0
AN27X019 (R)1unc10.0%0.0
INXXX119 (R)1GABA10.0%0.0
PSI (R)1unc10.0%0.0
IN06B077 (R)1GABA10.0%0.0
IN00A039 (M)1GABA10.0%0.0
IN03B088 (R)1GABA10.0%0.0
IN17A082, IN17A086 (R)1ACh10.0%0.0
EA00B022 (M)1unc10.0%0.0
MNxm01 (L)1unc10.0%0.0
IN06A120_b (R)1GABA10.0%0.0
IN19B103 (R)1ACh10.0%0.0
IN19B090 (L)1ACh10.0%0.0
IN19B064 (L)1ACh10.0%0.0
IN19B090 (R)1ACh10.0%0.0
IN03B082, IN03B093 (L)1GABA10.0%0.0
IN17A113,IN17A119 (L)1ACh10.0%0.0
IN03B091 (L)1GABA10.0%0.0
IN03B058 (R)1GABA10.0%0.0
IN07B083_c (R)1ACh10.0%0.0
IN17A067 (R)1ACh10.0%0.0
IN19B070 (L)1ACh10.0%0.0
IN18B052 (R)1ACh10.0%0.0
IN19B058 (L)1ACh10.0%0.0
SNpp351ACh10.0%0.0
IN17A077 (L)1ACh10.0%0.0
IN17A075 (L)1ACh10.0%0.0
IN17A056 (R)1ACh10.0%0.0
IN19B056 (R)1ACh10.0%0.0
IN19B069 (R)1ACh10.0%0.0
IN19B040 (R)1ACh10.0%0.0
IN12A052_a (R)1ACh10.0%0.0
IN06B029 (L)1GABA10.0%0.0
INXXX173 (R)1ACh10.0%0.0
IN19B043 (L)1ACh10.0%0.0
INXXX146 (L)1GABA10.0%0.0
IN19B034 (L)1ACh10.0%0.0
IN00A017 (M)1unc10.0%0.0
IN03B046 (R)1GABA10.0%0.0
IN00A001 (M)1unc10.0%0.0
INXXX008 (L)1unc10.0%0.0
IN12A001 (L)1ACh10.0%0.0
IN11A001 (L)1GABA10.0%0.0
AN05B101 (L)1GABA10.0%0.0
AN05B096 (R)1ACh10.0%0.0
AN27X024 (L)1Glu10.0%0.0
DNg02_e (L)1ACh10.0%0.0
ANXXX169 (L)1Glu10.0%0.0
AN06A030 (R)1Glu10.0%0.0
AN17B005 (L)1GABA10.0%0.0
DNg110 (L)1ACh10.0%0.0
AN06B039 (R)1GABA10.0%0.0
AN10B015 (R)1ACh10.0%0.0
DNg02_d (L)1ACh10.0%0.0
DNg110 (R)1ACh10.0%0.0
dMS9 (L)1ACh10.0%0.0
AN27X008 (R)1HA10.0%0.0
INXXX056 (R)1unc10.0%0.0
AN17A012 (R)1ACh10.0%0.0
DNg02_d (R)1ACh10.0%0.0
AN05B097 (R)1ACh10.0%0.0
DNa08 (L)1ACh10.0%0.0
DNg26 (R)1unc10.0%0.0
DNg26 (L)1unc10.0%0.0
DNp64 (R)1ACh10.0%0.0
DNg98 (R)1GABA10.0%0.0
DNg80 (R)1Glu10.0%0.0
DNg98 (L)1GABA10.0%0.0

Outputs

downstream
partner
#NTconns
EN00B001
%
Out
CV
mesVUM-MJ (M)1unc3131.0%0.0
EN00B015 (M)2unc2424.0%0.2
EN00B011 (M)2unc1111.0%0.8
IN19B043 (R)1ACh22.0%0.0
AN27X009 (R)1ACh22.0%0.0
ANXXX033 (R)1ACh22.0%0.0
IN19B067 (R)2ACh22.0%0.0
IN19B088 (L)1ACh11.0%0.0
IN06B070 (R)1GABA11.0%0.0
ENXXX226 (L)1unc11.0%0.0
IN03B084 (L)1GABA11.0%0.0
EN00B008 (M)1unc11.0%0.0
IN03B057 (L)1GABA11.0%0.0
IN06A103 (R)1GABA11.0%0.0
IN03B091 (L)1GABA11.0%0.0
IN17A075 (R)1ACh11.0%0.0
SNpp071ACh11.0%0.0
IN19B086 (R)1ACh11.0%0.0
IN17A113,IN17A119 (L)1ACh11.0%0.0
IN19B041 (L)1ACh11.0%0.0
DVMn 3a, b (L)1unc11.0%0.0
IN18B026 (L)1ACh11.0%0.0
IN00A011 (M)1GABA11.0%0.0
IN18B026 (R)1ACh11.0%0.0
IN19B031 (L)1ACh11.0%0.0
IN00A017 (M)1unc11.0%0.0
IN17A032 (L)1ACh11.0%0.0
IN03B052 (L)1GABA11.0%0.0
INXXX044 (L)1GABA11.0%0.0
MNad21 (L)1unc11.0%0.0
AN19B001 (R)1ACh11.0%0.0
ANXXX136 (L)1ACh11.0%0.0
DNp48 (R)1ACh11.0%0.0