Male CNS – Cell Type Explorer

Cm35(R)

AKA: Sm39 (Flywire, CTE-FAFB)

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
12,409
Total Synapses
Post: 9,696 | Pre: 2,713
log ratio : -1.84
12,409
Mean Synapses
Post: 9,696 | Pre: 2,713
log ratio : -1.84
GABA(70.0% CL)
Neurotransmitter

Mean Synapse Count per Layer

 
Post
Pre
LA
-
-
ME 1ME 2ME 3ME 4ME 5ME 6ME 7ME 8ME 9ME 10Total
1,2181118435,2842,69024--9,279
2,032--122511120---2,686
 
Post
Pre
LO 1LO 2LO 3LO 4LO 5ALO 5BLO 6Total
--------
--------
AME
342
5
 
Post
Pre
LOP 1LOP 2LOP 3LOP 4Total
-----
-----
central brain
6
-

Population spatial coverage

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (4 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
ME(R)9,27995.7%-1.792,68699.0%
AME(R)3423.5%-6.1050.2%
Optic-unspecified(R)690.7%-1.65220.8%
CentralBrain-unspecified60.1%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
Cm35
%
In
CV
Mi15 (R)541ACh3,51936.9%0.6
MeTu3c (R)86ACh9489.9%0.5
MeTu3b (R)42ACh9149.6%0.5
MeVC20 (R)2Glu6356.7%0.0
Cm20 (R)13GABA4214.4%0.4
MeTu3a (R)18ACh4124.3%0.4
Cm22 (R)10GABA3573.7%0.5
Cm18 (R)14Glu2662.8%0.3
aMe4 (R)8ACh2192.3%1.5
aMe30 (R)2Glu2022.1%0.3
aMe17e (R)1Glu1811.9%0.0
Cm8 (R)67GABA1761.8%0.7
MeVP15 (R)11ACh1671.7%0.5
Cm4 (R)37Glu770.8%0.7
aMe2 (R)4Glu750.8%0.5
aMe9 (R)2ACh670.7%0.2
OA-AL2i3 (R)2OA590.6%0.1
aMe5 (R)11ACh510.5%0.6
aMe17a (R)1unc490.5%0.0
MeVPMe5 (L)3Glu400.4%0.7
Dm2 (R)28ACh390.4%0.7
l-LNv (L)4unc300.3%1.0
l-LNv (R)3unc260.3%0.2
TmY17 (R)18ACh260.3%0.4
MeTu1 (R)13ACh220.2%0.7
Tm37 (R)15Glu190.2%0.6
LT58 (R)1Glu180.2%0.0
MeTu2a (R)12ACh180.2%0.6
Cm21 (R)10GABA180.2%0.5
Dm9 (R)15Glu180.2%0.3
MeVP12 (R)9ACh170.2%0.3
Tm5c (R)17Glu170.2%0.0
aMe6b (R)1ACh160.2%0.0
aMe17c (R)2Glu160.2%0.0
MeTu2b (R)12ACh160.2%0.5
OA-AL2i4 (R)1OA140.1%0.0
Tm31 (R)10GABA140.1%0.5
MeVC24 (R)1Glu130.1%0.0
Cm31b (R)1GABA120.1%0.0
Cm24 (R)4Glu120.1%0.8
Lat3 (R)3unc120.1%0.2
Cm14 (R)8GABA120.1%0.3
aMe6c (R)1Glu100.1%0.0
Cm16 (R)7Glu100.1%0.3
Mi1 (R)8ACh90.1%0.3
MeVPMe6 (L)1Glu80.1%0.0
Cm7 (R)5Glu80.1%0.5
Cm10 (R)6GABA80.1%0.4
MeVP14 (R)6ACh80.1%0.4
SLP250 (R)1Glu70.1%0.0
Cm6 (R)5GABA70.1%0.6
Mi16 (R)6GABA70.1%0.3
Tm16 (R)2ACh60.1%0.7
Cm23 (R)3Glu60.1%0.7
Tm5a (R)3ACh60.1%0.4
MeVP6 (R)3Glu60.1%0.4
Mi10 (R)5ACh60.1%0.3
Cm12 (R)6GABA60.1%0.0
MeVC7a (L)1ACh50.1%0.0
DNc01 (L)1unc50.1%0.0
MeVPMe11 (L)1Glu50.1%0.0
MeVC2 (L)1ACh50.1%0.0
MeVPMe9 (L)2Glu50.1%0.6
L3 (R)3ACh50.1%0.3
Cm3 (R)5GABA50.1%0.0
Dm20 (R)5Glu50.1%0.0
Cm34 (R)1Glu40.0%0.0
MeLo3b (R)3ACh40.0%0.4
Cm28 (R)3Glu40.0%0.4
R8y4HA40.0%0.0
Dm-DRA1 (R)4Glu40.0%0.0
MeLo1 (R)4ACh40.0%0.0
L5 (R)1ACh30.0%0.0
Cm-DRA (R)1ACh30.0%0.0
aMe10 (L)1ACh30.0%0.0
Cm25 (R)1Glu30.0%0.0
MeVP9 (R)2ACh30.0%0.3
aMe12 (R)2ACh30.0%0.3
MeVCMe1 (R)2ACh30.0%0.3
MeVP1 (R)3ACh30.0%0.0
Tm38 (R)1ACh20.0%0.0
R7d1HA20.0%0.0
Cm9 (R)1Glu20.0%0.0
MeLo4 (R)1ACh20.0%0.0
ME_unclear (R)1Glu20.0%0.0
Cm_unclear (R)1ACh20.0%0.0
MeVP7 (R)1ACh20.0%0.0
MeVC_unclear (R)1Glu20.0%0.0
L2 (R)1ACh20.0%0.0
CL125 (R)1Glu20.0%0.0
Mi19 (R)1unc20.0%0.0
DNc02 (L)1unc20.0%0.0
MeVCMe1 (L)1ACh20.0%0.0
MeVP2 (R)2ACh20.0%0.0
MeLo5 (R)2ACh20.0%0.0
MeTu4a (R)2ACh20.0%0.0
Cm5 (R)2GABA20.0%0.0
MeVP11 (R)2ACh20.0%0.0
Cm15 (R)2GABA20.0%0.0
Lawf1 (R)2ACh20.0%0.0
Dm18 (R)2GABA20.0%0.0
MeVPMe12 (L)2ACh20.0%0.0
MeVPMe2 (R)2Glu20.0%0.0
MeVPMe10 (R)1Glu10.0%0.0
MeVPMe12 (R)1ACh10.0%0.0
AN09A005 (R)1unc10.0%0.0
R8_unclear1HA10.0%0.0
Cm1 (R)1ACh10.0%0.0
Dm10 (R)1GABA10.0%0.0
Mi2 (R)1Glu10.0%0.0
Dm11 (R)1Glu10.0%0.0
C2 (R)1GABA10.0%0.0
Tm3 (R)1ACh10.0%0.0
Dm8b (R)1Glu10.0%0.0
Tm6 (R)1ACh10.0%0.0
C3 (R)1GABA10.0%0.0
TmY10 (R)1ACh10.0%0.0
MeTu4d (R)1ACh10.0%0.0
HBeyelet (R)1HA10.0%0.0
MeLo7 (R)1ACh10.0%0.0
Tm34 (R)1Glu10.0%0.0
MeVP16 (R)1Glu10.0%0.0
Cm27 (R)1Glu10.0%0.0
Cm11b (R)1ACh10.0%0.0
Cm11d (R)1ACh10.0%0.0
TmY15 (R)1GABA10.0%0.0
Dm1 (R)1Glu10.0%0.0
MeVP31 (R)1ACh10.0%0.0
Li20 (R)1Glu10.0%0.0
Dm4 (R)1Glu10.0%0.0
MeVPMe10 (L)1Glu10.0%0.0
SLP249 (R)1Glu10.0%0.0
MeVP8 (R)1ACh10.0%0.0
MeVPLo2 (R)1ACh10.0%0.0
aMe15 (R)1ACh10.0%0.0
MeVPMe5 (R)1Glu10.0%0.0
MeVP33 (R)1ACh10.0%0.0
MeVP25 (R)1ACh10.0%0.0
MeVPMe7 (L)1Glu10.0%0.0
Cm33 (R)1GABA10.0%0.0
MeVP59 (R)1ACh10.0%0.0
aMe17b (R)1GABA10.0%0.0
MeVC7b (L)1ACh10.0%0.0
MeVPMe6 (R)1Glu10.0%0.0
MeVC27 (L)1unc10.0%0.0
MeVP56 (R)1Glu10.0%0.0
MeVC21 (R)1Glu10.0%0.0
OA-ASM1 (L)1OA10.0%0.0
MeVC22 (R)1Glu10.0%0.0
MeVC6 (L)1ACh10.0%0.0
MeVPMe3 (R)1Glu10.0%0.0
Dm17 (R)1Glu10.0%0.0
LPT54 (R)1ACh10.0%0.0
MeVC25 (R)1Glu10.0%0.0

Outputs

downstream
partner
#NTconns
Cm35
%
Out
CV
Mi15 (R)568ACh5,24777.0%0.5
Dm9 (R)114Glu4817.1%0.7
aMe30 (R)2Glu2533.7%0.2
Dm20 (R)42Glu1882.8%0.5
Cm20 (R)13GABA1291.9%0.5
MeTu3c (R)28ACh390.6%0.5
aMe6c (R)1Glu340.5%0.0
Dm10 (R)21GABA290.4%0.5
Dm2 (R)17ACh270.4%0.4
Lawf2 (R)16ACh250.4%0.6
Tm3 (R)17ACh210.3%0.4
Mi1 (R)11ACh180.3%0.6
Tm5c (R)16Glu180.3%0.3
aMe4 (R)8ACh170.2%0.9
MeVC23 (R)1Glu150.2%0.0
Mi16 (R)6GABA110.2%0.8
C3 (R)8GABA110.2%0.5
Lawf1 (R)10ACh110.2%0.3
Tm6 (R)4ACh100.1%0.8
Tm12 (R)9ACh100.1%0.3
l-LNv (R)4unc80.1%0.6
Tm20 (R)7ACh80.1%0.3
OA-AL2i3 (R)2OA70.1%0.7
MeTu3b (R)7ACh70.1%0.0
Mi14 (R)1Glu60.1%0.0
LT58 (R)1Glu60.1%0.0
Cm13 (R)4Glu60.1%0.6
Tm16 (R)5ACh60.1%0.3
Tm37 (R)6Glu60.1%0.0
Cm8 (R)6GABA60.1%0.0
MeVPMe12 (R)2ACh50.1%0.2
Mi2 (R)3Glu50.1%0.6
L4 (R)3ACh50.1%0.6
MeLo1 (R)3ACh50.1%0.6
Cm21 (R)4GABA50.1%0.3
Cm14 (R)4GABA50.1%0.3
Tm38 (R)2ACh40.1%0.5
Mi18 (R)2GABA40.1%0.5
Cm22 (R)2GABA40.1%0.0
MeVP12 (R)3ACh40.1%0.4
TmY5a (R)4Glu40.1%0.0
aMe1 (R)1GABA30.0%0.0
MeLo3b (R)1ACh30.0%0.0
MeVPMe3 (R)1Glu30.0%0.0
MeVPMe11 (R)1Glu30.0%0.0
Tm9 (R)2ACh30.0%0.3
TmY18 (R)3ACh30.0%0.0
MeLo6 (R)3ACh30.0%0.0
MeTu3a (R)3ACh30.0%0.0
T2 (R)1ACh20.0%0.0
Cm3 (R)1GABA20.0%0.0
L2 (R)1ACh20.0%0.0
aMe6b (R)1ACh20.0%0.0
Cm11d (R)1ACh20.0%0.0
Dm18 (R)1GABA20.0%0.0
MeVC20 (R)1Glu20.0%0.0
aMe12 (R)1ACh20.0%0.0
MeVPMe11 (L)1Glu20.0%0.0
aMe17e (R)1Glu20.0%0.0
Cm4 (R)2Glu20.0%0.0
Cm5 (R)2GABA20.0%0.0
Mi10 (R)2ACh20.0%0.0
Tm1 (R)2ACh20.0%0.0
MeVP7 (R)2ACh20.0%0.0
L1 (R)2Glu20.0%0.0
Mi19 (R)2unc20.0%0.0
MeVCMe1 (L)2ACh20.0%0.0
l-LNv (L)1unc10.0%0.0
Dm6 (R)1Glu10.0%0.0
C2 (R)1GABA10.0%0.0
L5 (R)1ACh10.0%0.0
Mi9 (R)1Glu10.0%0.0
Tm35 (R)1Glu10.0%0.0
Tm29 (R)1Glu10.0%0.0
Cm9 (R)1Glu10.0%0.0
MeTu2a (R)1ACh10.0%0.0
Mi13 (R)1Glu10.0%0.0
Cm12 (R)1GABA10.0%0.0
Tm32 (R)1Glu10.0%0.0
Tm31 (R)1GABA10.0%0.0
Tm5Y (R)1ACh10.0%0.0
Mi4 (R)1GABA10.0%0.0
TmY3 (R)1ACh10.0%0.0
TmY13 (R)1ACh10.0%0.0
Tm2 (R)1ACh10.0%0.0
Cm10 (R)1GABA10.0%0.0
TmY20 (R)1ACh10.0%0.0
Tm26 (R)1ACh10.0%0.0
MeLo2 (R)1ACh10.0%0.0
MeVPMe9 (L)1Glu10.0%0.0
aMe5 (R)1ACh10.0%0.0
Cm23 (R)1Glu10.0%0.0
HBeyelet (R)1HA10.0%0.0
LC14b (L)1ACh10.0%0.0
Dm4 (R)1Glu10.0%0.0
Cm25 (R)1Glu10.0%0.0
MeVP8 (R)1ACh10.0%0.0
Cm28 (R)1Glu10.0%0.0
aMe3 (R)1Glu10.0%0.0
MeVP33 (R)1ACh10.0%0.0
Dm19 (R)1Glu10.0%0.0
Cm32 (R)1GABA10.0%0.0
MeVPaMe1 (R)1ACh10.0%0.0
Cm30 (R)1GABA10.0%0.0
MeVC22 (R)1Glu10.0%0.0
Cm31b (R)1GABA10.0%0.0
MeVCMe1 (R)1ACh10.0%0.0
MeVPMe2 (R)1Glu10.0%0.0
MeVC1 (L)1ACh10.0%0.0