Male CNS – Cell Type Explorer

Cm26(R)

13
Total Neurons
Right: 6 | Left: 7
log ratio : 0.22
17,877
Total Synapses
Post: 15,051 | Pre: 2,826
log ratio : -2.41
2,979.5
Mean Synapses
Post: 2,508.5 | Pre: 471
log ratio : -2.41
Glu(82.8% CL)
Neurotransmitter

Mean Synapse Count per Layer

 
Post
Pre
LA
-
-
ME 1ME 2ME 3ME 4ME 5ME 6ME 7ME 8ME 9ME 10Total
3-47109.22,123.5242.841.8--2,531.2
1--0.512.3412.739.58.8--474.8
 
Post
Pre
LO 1LO 2LO 3LO 4LO 5ALO 5BLO 6Total
--------
--------
AME
6
-
 
Post
Pre
LOP 1LOP 2LOP 3LOP 4Total
-----
-----
central brain
-
-

Population spatial coverage

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (3 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
ME(R)15,04199.9%-2.412,82499.9%
AME(R)60.0%-inf00.0%
Optic-unspecified(R)40.0%-1.0020.1%

Connectivity

Inputs

upstream
partner
#NTconns
Cm26
%
In
CV
Tm5b (R)206ACh62825.4%0.5
TmY5a (R)421Glu226.29.2%0.7
Tm29 (R)199Glu136.85.5%0.6
Tm38 (R)89ACh131.35.3%0.6
Dm8a (R)185Glu125.85.1%0.7
Tm5c (R)215Glu119.24.8%0.6
Cm17 (R)15GABA112.54.6%0.6
Mi10 (R)143ACh98.54.0%0.6
Cm11a (R)36ACh97.74.0%0.6
Cm10 (R)39GABA96.23.9%0.5
Tm30 (R)61GABA90.33.7%0.4
Tm5Y (R)165ACh71.32.9%0.7
Cm29 (R)3GABA54.82.2%0.1
Tm26 (R)46ACh44.81.8%0.8
Cm19 (R)14GABA44.51.8%0.6
Cm28 (R)6Glu44.51.8%0.4
Cm31a (R)2GABA39.21.6%0.1
LT58 (R)1Glu27.51.1%0.0
MeVC9 (L)1ACh241.0%0.0
Tm5a (R)85ACh20.50.8%0.6
Cm31b (R)1GABA15.30.6%0.0
MeVP7 (R)11ACh14.80.6%0.4
TmY17 (R)51ACh13.20.5%0.5
Cm32 (R)1GABA11.50.5%0.0
Tm39 (R)40ACh11.50.5%1.3
MeVP43 (R)1ACh10.70.4%0.0
Cm15 (R)18GABA100.4%0.9
aMe17b (R)2GABA8.70.4%0.6
Cm5 (R)24GABA8.30.3%0.8
TmY21 (R)30ACh80.3%0.5
MeVP52 (R)1ACh5.50.2%0.0
MeVP2 (R)18ACh5.20.2%0.5
Cm1 (R)25ACh5.20.2%0.5
MeLo4 (R)15ACh50.2%0.9
Cm_unclear (R)1ACh4.80.2%0.0
Cm7 (R)19Glu4.80.2%0.6
Cm21 (R)6GABA4.70.2%0.9
Dm2 (R)17ACh4.50.2%0.4
OA-AL2i4 (R)1OA40.2%0.0
MeLo3b (R)8ACh3.80.2%0.6
Dm8b (R)19Glu3.30.1%0.2
Tm40 (R)11ACh3.20.1%0.6
Dm9 (R)14Glu3.20.1%0.4
MeVP8 (R)4ACh30.1%0.9
Tm33 (R)14ACh30.1%0.5
Tm37 (R)15Glu30.1%0.3
MeVP63 (R)1GABA2.50.1%0.0
Cm3 (R)9GABA2.50.1%0.4
MeLo3a (R)10ACh2.50.1%0.3
aMe17e (R)1Glu20.1%0.0
TmY9b (R)8ACh1.80.1%0.5
Cm26 (R)5Glu1.80.1%0.5
Cm2 (R)10ACh1.80.1%0.3
MeVP32 (R)1ACh1.70.1%0.0
MeVC22 (R)2Glu1.70.1%0.2
TmY13 (R)9ACh1.70.1%0.3
aMe12 (R)2ACh1.30.1%0.0
MeTu1 (R)5ACh1.30.1%0.3
TmY10 (R)8ACh1.30.1%0.0
LA_ME_unclear (R)3ACh1.20.0%0.2
Mi16 (R)5GABA1.20.0%0.6
OA-ASM1 (L)2OA10.0%0.3
Cm20 (R)4GABA10.0%0.3
MeVPMe13 (L)1ACh10.0%0.0
MeVPMe13 (R)1ACh10.0%0.0
Cm6 (R)6GABA10.0%0.0
MeVC12 (L)1ACh0.80.0%0.0
MeVP33 (R)1ACh0.80.0%0.0
Cm11d (R)3ACh0.80.0%0.6
OA-ASM1 (R)2OA0.80.0%0.6
MeVP41 (R)1ACh0.80.0%0.0
R7_unclear2HA0.70.0%0.5
MeVC23 (R)1Glu0.70.0%0.0
Tm31 (R)3GABA0.70.0%0.4
Tm32 (R)3Glu0.70.0%0.4
Cm11b (R)3ACh0.70.0%0.4
Mi18 (R)2GABA0.70.0%0.5
MeTu3c (R)4ACh0.70.0%0.0
ME_unclear (R)1Glu0.70.0%0.0
MeVP64 (R)1Glu0.70.0%0.0
5-HTPMPV03 (L)15-HT0.70.0%0.0
OLVC4 (L)1unc0.50.0%0.0
Cm34 (R)1Glu0.50.0%0.0
Tm36 (R)2ACh0.50.0%0.3
MeVP9 (R)2ACh0.50.0%0.3
aMe2 (R)2Glu0.50.0%0.3
TmY4 (R)3ACh0.50.0%0.0
Dm11 (R)3Glu0.50.0%0.0
Cm9 (R)3Glu0.50.0%0.0
R7p1HA0.30.0%0.0
aMe5 (R)1ACh0.30.0%0.0
MeVC5 (L)1ACh0.30.0%0.0
Dm3b (R)1Glu0.30.0%0.0
MeVC6 (L)1ACh0.30.0%0.0
MeVCMe1 (L)1ACh0.30.0%0.0
OA-AL2i3 (R)1OA0.30.0%0.0
Mi15 (R)2ACh0.30.0%0.0
Y14 (R)1Glu0.30.0%0.0
Cm8 (R)2GABA0.30.0%0.0
Cm27 (R)1Glu0.30.0%0.0
MeVP25 (R)1ACh0.30.0%0.0
MeVC21 (R)2Glu0.30.0%0.0
Tm20 (R)2ACh0.30.0%0.0
MeVPMe6 (L)1Glu0.30.0%0.0
MeTu4f (R)2ACh0.30.0%0.0
MeTu3b (R)2ACh0.30.0%0.0
MeVC4b (L)1ACh0.30.0%0.0
MeLo1 (R)2ACh0.30.0%0.0
MeVP3 (R)2ACh0.30.0%0.0
Mi4 (R)2GABA0.30.0%0.0
MeVP1 (R)2ACh0.30.0%0.0
Pm4 (R)2GABA0.30.0%0.0
Tm35 (R)1Glu0.20.0%0.0
MeVPMe7 (L)1Glu0.20.0%0.0
OA-AL2i1 (R)1unc0.20.0%0.0
aMe17a (R)1unc0.20.0%0.0
MeTu4d (R)1ACh0.20.0%0.0
MeVP10 (R)1ACh0.20.0%0.0
MeVPMe7 (R)1Glu0.20.0%0.0
L5 (R)1ACh0.20.0%0.0
Tm12 (R)1ACh0.20.0%0.0
MeLo7 (R)1ACh0.20.0%0.0
Cm4 (R)1Glu0.20.0%0.0
T2a (R)1ACh0.20.0%0.0
Mi9 (R)1Glu0.20.0%0.0
Lawf2 (R)1ACh0.20.0%0.0
MeLo10 (R)1Glu0.20.0%0.0
aMe9 (R)1ACh0.20.0%0.0
aMe30 (R)1Glu0.20.0%0.0
5-HTPMPV03 (R)15-HT0.20.0%0.0
Tm34 (R)1Glu0.20.0%0.0
TmY9a (R)1ACh0.20.0%0.0
MeVP6 (R)1Glu0.20.0%0.0
MeVP6_unclear (R)1Glu0.20.0%0.0
Cm23 (R)1Glu0.20.0%0.0
Pm9 (R)1GABA0.20.0%0.0
MeVP21 (R)1ACh0.20.0%0.0
MeVP40 (R)1ACh0.20.0%0.0
MeVC11 (L)1ACh0.20.0%0.0
R7y1HA0.20.0%0.0
MeVP22 (R)1GABA0.20.0%0.0

Outputs

downstream
partner
#NTconns
Cm26
%
Out
CV
Tm5b (R)204ACh28314.8%0.6
Tm5Y (R)271ACh247.812.9%0.7
Tm29 (R)212Glu222.811.6%0.6
Tm5a (R)224ACh161.38.4%0.7
Tm39 (R)150ACh116.76.1%0.6
Cm6 (R)83GABA99.25.2%0.7
Cm17 (R)15GABA90.74.7%0.6
TmY5a (R)240Glu69.83.6%0.6
TmY21 (R)110ACh643.3%0.7
Cm29 (R)3GABA57.23.0%0.6
Tm36 (R)58ACh46.82.4%0.6
Tm5c (R)132Glu42.32.2%0.6
Cm19 (R)14GABA34.51.8%0.7
Tm31 (R)45GABA29.31.5%0.6
MeVP41 (R)1ACh27.31.4%0.0
Tm38 (R)55ACh20.21.1%0.6
Tm30 (R)40GABA191.0%0.7
Cm7 (R)41Glu18.71.0%0.7
MeVP21 (R)3ACh14.30.7%0.4
Pm4 (R)17GABA13.70.7%0.9
MeTu3b (R)14ACh12.50.7%0.6
MeLo4 (R)23ACh11.30.6%0.6
MeVP2 (R)25ACh110.6%0.6
Tm33 (R)37ACh9.50.5%0.6
T2a (R)41ACh9.20.5%0.5
aMe5 (R)11ACh8.80.5%1.0
Cm34 (R)1Glu7.50.4%0.0
MeTu1 (R)18ACh7.50.4%0.7
Dm8b (R)24Glu6.20.3%0.5
Tm26 (R)20ACh5.70.3%0.7
Cm31a (R)2GABA5.50.3%0.2
MeTu3c (R)20ACh5.30.3%0.7
Dm8a (R)24Glu50.3%0.5
Tm34 (R)14Glu4.80.3%0.8
Cm11b (R)16ACh4.80.3%0.4
MeVP27 (R)1ACh4.50.2%0.0
MeVP47 (R)1ACh4.30.2%0.0
Tm40 (R)18ACh4.30.2%0.5
Cm9 (R)15Glu4.20.2%0.6
T2 (R)20ACh4.20.2%0.4
MeVP7 (R)8ACh3.80.2%0.7
MeTu4a (R)12ACh3.80.2%0.4
Tm20 (R)17ACh3.80.2%0.5
LT58 (R)1Glu3.70.2%0.0
MeVP8 (R)4ACh3.50.2%0.7
MeVP52 (R)1ACh3.50.2%0.0
Cm28 (R)5Glu3.30.2%0.6
Cm1 (R)15ACh3.30.2%0.4
Tm12 (R)16ACh3.20.2%0.3
Tm37 (R)19Glu3.20.2%0.0
MeVP43 (R)1ACh30.2%0.0
TmY10 (R)14ACh2.80.1%0.5
Dm2 (R)12ACh2.80.1%0.3
MeVP36 (R)1ACh2.50.1%0.0
MeVPMe13 (R)1ACh2.50.1%0.0
Mi18 (R)9GABA2.50.1%0.6
ME_unclear (R)1Glu2.30.1%0.0
Cm15 (R)8GABA2.20.1%0.6
Cm3 (R)11GABA2.20.1%0.5
Cm26 (R)6Glu1.80.1%0.6
TmY4 (R)8ACh1.70.1%0.3
Cm11a (R)7ACh1.70.1%0.3
MeVP63 (R)1GABA1.50.1%0.0
TmY17 (R)7ACh1.30.1%0.3
TmY18 (R)7ACh1.30.1%0.3
Cm11d (R)5ACh1.30.1%0.3
Mi10 (R)8ACh1.30.1%0.0
MeVP33 (R)1ACh1.20.1%0.0
Y12 (R)4Glu1.20.1%0.5
Cm2 (R)6ACh1.20.1%0.3
LA_ME_unclear (R)2ACh10.1%0.7
Cm10 (R)3GABA10.1%0.7
MeLo3a (R)5ACh10.1%0.3
Cm31b (R)1GABA0.80.0%0.0
Pm8 (R)3GABA0.80.0%0.6
Cm5 (R)4GABA0.80.0%0.3
Tm35 (R)4Glu0.80.0%0.3
MeVPMe7 (R)1Glu0.80.0%0.0
Dm9 (R)4Glu0.80.0%0.3
MeVP3 (R)4ACh0.80.0%0.3
MeVP64 (R)1Glu0.70.0%0.0
Cm11c (R)2ACh0.70.0%0.5
MeVP30 (R)1ACh0.70.0%0.0
aMe10 (R)2ACh0.70.0%0.5
Tm2 (R)3ACh0.70.0%0.4
Cm32 (R)1GABA0.70.0%0.0
MeVP12 (R)2ACh0.50.0%0.3
Tm4 (R)3ACh0.50.0%0.0
Cm27 (R)2Glu0.50.0%0.3
aMe12 (R)2ACh0.50.0%0.3
MeVP1 (R)3ACh0.50.0%0.0
MeVP55 (R)1Glu0.30.0%0.0
MeVPMe5 (R)1Glu0.30.0%0.0
MeVP56 (R)1Glu0.30.0%0.0
Tm9 (R)1ACh0.30.0%0.0
MeTu3a (R)1ACh0.30.0%0.0
MeVPMe3 (R)1Glu0.30.0%0.0
Y11 (R)1Glu0.30.0%0.0
LT88 (R)1Glu0.30.0%0.0
MeVPLo2 (R)1ACh0.30.0%0.0
MeVP11 (R)2ACh0.30.0%0.0
Cm21 (R)2GABA0.30.0%0.0
Cm8 (R)2GABA0.30.0%0.0
Dm4 (R)2Glu0.30.0%0.0
MeTu4f (R)2ACh0.30.0%0.0
TmY9b (R)1ACh0.20.0%0.0
MeVP4 (R)1ACh0.20.0%0.0
aMe9 (R)1ACh0.20.0%0.0
MeVPMe7 (L)1Glu0.20.0%0.0
Mi15 (R)1ACh0.20.0%0.0
MeLo7 (R)1ACh0.20.0%0.0
Cm_unclear (R)1ACh0.20.0%0.0
Tm1 (R)1ACh0.20.0%0.0
MeVP59 (R)1ACh0.20.0%0.0
aMe17e (R)1Glu0.20.0%0.0
DNc01 (R)1unc0.20.0%0.0
ME_LOP_unclear (R)1Glu0.20.0%0.0
MeLo6 (R)1ACh0.20.0%0.0
Mi4 (R)1GABA0.20.0%0.0
MeTu4_unclear (R)1ACh0.20.0%0.0
Cm20 (R)1GABA0.20.0%0.0
Tm16 (R)1ACh0.20.0%0.0
Lat4 (R)1unc0.20.0%0.0
MeVP18 (R)1Glu0.20.0%0.0
MeVC20 (R)1Glu0.20.0%0.0
SLP250 (R)1Glu0.20.0%0.0
MeVP9 (R)1ACh0.20.0%0.0
MeVP26 (R)1Glu0.20.0%0.0
Mi13 (R)1Glu0.20.0%0.0
MeVP10 (R)1ACh0.20.0%0.0
TmY13 (R)1ACh0.20.0%0.0
C3 (R)1GABA0.20.0%0.0
Tm32 (R)1Glu0.20.0%0.0
Dm11 (R)1Glu0.20.0%0.0
Y3 (R)1ACh0.20.0%0.0
Pm9 (R)1GABA0.20.0%0.0
TmY14 (R)1unc0.20.0%0.0
MeVP29 (R)1ACh0.20.0%0.0
MeVC22 (R)1Glu0.20.0%0.0