Male CNS – Cell Type Explorer

CL153(L)

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
1,214
Total Synapses
Post: 866 | Pre: 348
log ratio : -1.32
1,214
Mean Synapses
Post: 866 | Pre: 348
log ratio : -1.32
Glu(85.3% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (5 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
SCL(L)53461.7%-1.6017650.6%
ICL(L)18821.7%-0.959727.9%
SLP(L)12514.4%-0.767421.3%
CentralBrain-unspecified121.4%-3.5810.3%
SMP(L)70.8%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
CL153
%
In
CV
aMe15 (R)1ACh728.7%0.0
CL340 (R)2ACh455.4%0.4
CL004 (L)2Glu435.2%0.0
CL354 (R)2Glu354.2%0.1
CL353 (R)4Glu283.4%0.7
CB4071 (L)4ACh242.9%0.6
PLP188 (L)5ACh212.5%0.5
SLP250 (L)1Glu202.4%0.0
SLP382 (L)1Glu192.3%0.0
SLP206 (L)1GABA192.3%0.0
LT76 (L)1ACh182.2%0.0
LoVP56 (L)1Glu172.1%0.0
SLP082 (L)5Glu172.1%0.3
AVLP212 (L)1ACh161.9%0.0
CL364 (L)1Glu151.8%0.0
PLP001 (L)2GABA151.8%0.1
CL070_a (L)1ACh141.7%0.0
CB3276 (L)1ACh141.7%0.0
CL258 (L)2ACh131.6%0.5
LoVP70 (L)1ACh121.5%0.0
SLP447 (L)1Glu121.5%0.0
PLP115_b (L)2ACh111.3%0.5
CB4070 (R)7ACh111.3%0.5
CB3603 (L)1ACh101.2%0.0
CL152 (L)2Glu101.2%0.4
AVLP281 (L)1ACh91.1%0.0
SLP310 (L)1ACh91.1%0.0
aMe15 (L)1ACh91.1%0.0
CB3142 (L)1ACh81.0%0.0
MeVP43 (L)1ACh70.8%0.0
OA-VUMa3 (M)1OA70.8%0.0
PLP094 (L)1ACh60.7%0.0
CB4158 (L)2ACh60.7%0.7
LoVP62 (L)2ACh60.7%0.0
CB1467 (L)1ACh50.6%0.0
CL096 (L)1ACh50.6%0.0
AVLP574 (L)2ACh50.6%0.6
SLP375 (L)2ACh50.6%0.2
CB3671 (L)1ACh40.5%0.0
SLP168 (L)1ACh40.5%0.0
CL127 (L)1GABA40.5%0.0
LHPV8c1 (L)1ACh40.5%0.0
CL064 (L)1GABA40.5%0.0
AVLP269_b (L)1ACh40.5%0.0
SMP495_a (L)1Glu40.5%0.0
LoVCLo2 (L)1unc40.5%0.0
PLP189 (L)2ACh40.5%0.5
PLP115_a (L)2ACh40.5%0.5
CL269 (L)2ACh40.5%0.5
SMP342 (L)1Glu30.4%0.0
AVLP274_a (L)1ACh30.4%0.0
CL085_c (L)1ACh30.4%0.0
SMP355 (L)1ACh30.4%0.0
CB4069 (R)1ACh30.4%0.0
SLP334 (L)1Glu30.4%0.0
SLP136 (L)1Glu30.4%0.0
CB0029 (L)1ACh30.4%0.0
CL094 (R)1ACh30.4%0.0
AstA1 (R)1GABA30.4%0.0
AstA1 (L)1GABA30.4%0.0
AVLP279 (L)2ACh30.4%0.3
CB1576 (R)2Glu30.4%0.3
CL134 (L)2Glu30.4%0.3
PS096 (R)3GABA30.4%0.0
CB0998 (L)1ACh20.2%0.0
LoVP68 (L)1ACh20.2%0.0
CB3049 (L)1ACh20.2%0.0
SLP003 (L)1GABA20.2%0.0
CL075_a (L)1ACh20.2%0.0
CL154 (L)1Glu20.2%0.0
CL353 (L)1Glu20.2%0.0
PLP175 (L)1ACh20.2%0.0
SLP395 (L)1Glu20.2%0.0
SMP378 (L)1ACh20.2%0.0
PLP182 (L)1Glu20.2%0.0
AVLP060 (L)1Glu20.2%0.0
CL071_a (L)1ACh20.2%0.0
PLP076 (L)1GABA20.2%0.0
CL026 (L)1Glu20.2%0.0
SMP339 (L)1ACh20.2%0.0
LoVP57 (L)1ACh20.2%0.0
MeVP46 (L)1Glu20.2%0.0
AVLP508 (L)1ACh20.2%0.0
AVLP574 (R)1ACh20.2%0.0
PLP001 (R)1GABA20.2%0.0
AVLP211 (L)1ACh20.2%0.0
SLP130 (L)1ACh20.2%0.0
AVLP571 (L)1ACh20.2%0.0
CL086_a (L)2ACh20.2%0.0
CL087 (L)2ACh20.2%0.0
CL355 (R)2Glu20.2%0.0
CL091 (L)2ACh20.2%0.0
SLP375 (R)2ACh20.2%0.0
CL090_d (L)2ACh20.2%0.0
LoVP75 (L)1ACh10.1%0.0
CL225 (R)1ACh10.1%0.0
CB3900 (L)1ACh10.1%0.0
LoVP51 (L)1ACh10.1%0.0
CL157 (L)1ACh10.1%0.0
LoVP59 (L)1ACh10.1%0.0
CL175 (L)1Glu10.1%0.0
LoVP35 (L)1ACh10.1%0.0
SLP366 (L)1ACh10.1%0.0
CL074 (L)1ACh10.1%0.0
PLP254 (L)1ACh10.1%0.0
CB2200 (L)1ACh10.1%0.0
IB004_b (L)1Glu10.1%0.0
GNG103 (L)1GABA10.1%0.0
CL351 (R)1Glu10.1%0.0
CB2884 (L)1Glu10.1%0.0
SMP279_a (L)1Glu10.1%0.0
CB2401 (L)1Glu10.1%0.0
CL018 (L)1Glu10.1%0.0
CL170 (L)1ACh10.1%0.0
AVLP269_a (R)1ACh10.1%0.0
CB3768 (L)1ACh10.1%0.0
CB3074 (R)1ACh10.1%0.0
SMP243 (L)1ACh10.1%0.0
PLP053 (L)1ACh10.1%0.0
CL292 (L)1ACh10.1%0.0
CL089_a2 (L)1ACh10.1%0.0
CB4069 (L)1ACh10.1%0.0
CL086_c (L)1ACh10.1%0.0
SMP245 (L)1ACh10.1%0.0
CL141 (L)1Glu10.1%0.0
AVLP604 (L)1unc10.1%0.0
CL028 (L)1GABA10.1%0.0
CL015_a (L)1Glu10.1%0.0
SLP076 (L)1Glu10.1%0.0
SLP465 (L)1ACh10.1%0.0
CL280 (L)1ACh10.1%0.0
CL345 (R)1Glu10.1%0.0
SMP421 (L)1ACh10.1%0.0
AVLP271 (L)1ACh10.1%0.0
CL012 (R)1ACh10.1%0.0
PS096 (L)1GABA10.1%0.0
CL133 (L)1Glu10.1%0.0
SLP444 (R)1unc10.1%0.0
LHCENT13_a (L)1GABA10.1%0.0
SMP531 (L)1Glu10.1%0.0
AVLP269_a (L)1ACh10.1%0.0
SMP255 (L)1ACh10.1%0.0
PLP162 (L)1ACh10.1%0.0
LHPV6m1 (L)1Glu10.1%0.0
CL085_b (L)1ACh10.1%0.0
CRZ02 (L)1unc10.1%0.0
CL340 (L)1ACh10.1%0.0
WED092 (R)1ACh10.1%0.0
PPL202 (L)1DA10.1%0.0
SLP457 (L)1unc10.1%0.0
LoVC18 (L)1DA10.1%0.0
CL357 (R)1unc10.1%0.0
AVLP442 (L)1ACh10.1%0.0

Outputs

downstream
partner
#NTconns
CL153
%
Out
CV
CL075_a (L)1ACh515.2%0.0
CL170 (L)2ACh495.0%0.6
CB4070 (L)7ACh424.3%1.2
CB4069 (R)3ACh404.1%0.7
AVLP212 (L)1ACh333.4%0.0
aMe15 (R)1ACh333.4%0.0
CL085_b (L)1ACh303.1%0.0
AVLP211 (L)1ACh303.1%0.0
CB3951 (L)1ACh293.0%0.0
CL085_c (L)1ACh252.5%0.0
CL171 (L)3ACh252.5%0.3
CL086_d (L)1ACh191.9%0.0
CL354 (L)2Glu171.7%0.5
IB109 (L)1Glu161.6%0.0
CL014 (L)3Glu151.5%0.7
CL169 (L)3ACh151.5%0.4
AVLP269_b (L)2ACh151.5%0.1
CB4071 (L)4ACh151.5%0.6
CL224 (R)1ACh141.4%0.0
CL086_a (L)2ACh141.4%0.9
AVLP279 (L)5ACh141.4%0.5
PS096 (L)4GABA141.4%0.3
CL089_c (L)3ACh131.3%0.5
CL340 (R)2ACh121.2%0.3
PS096 (R)4GABA121.2%0.6
CB4069 (L)4ACh121.2%0.6
CL070_b (L)1ACh111.1%0.0
CB4071 (R)2ACh101.0%0.8
LT76 (L)1ACh90.9%0.0
CL225 (R)3ACh90.9%0.9
CB4158 (L)2ACh90.9%0.6
CL094 (L)1ACh80.8%0.0
GNG103 (L)1GABA80.8%0.0
CL224 (L)1ACh80.8%0.0
CB3276 (L)1ACh80.8%0.0
AVLP271 (L)2ACh80.8%0.8
CL354 (R)2Glu80.8%0.5
CL085_a (L)1ACh70.7%0.0
CB0029 (L)1ACh70.7%0.0
CL048 (L)1Glu60.6%0.0
CL071_a (L)1ACh60.6%0.0
SMP330 (L)2ACh60.6%0.7
PS038 (L)3ACh60.6%0.4
CB4073 (L)2ACh60.6%0.0
CL336 (L)1ACh50.5%0.0
AVLP274_a (L)1ACh50.5%0.0
CL089_a2 (L)1ACh50.5%0.0
IB042 (L)1Glu50.5%0.0
CL141 (L)1Glu50.5%0.0
CL225 (L)1ACh50.5%0.0
CL073 (R)1ACh50.5%0.0
CL073 (L)1ACh50.5%0.0
AVLP574 (L)1ACh50.5%0.0
CL094 (R)1ACh50.5%0.0
AVLP442 (L)1ACh50.5%0.0
SLP375 (L)2ACh50.5%0.2
CL090_d (L)3ACh50.5%0.6
CL088_b (L)1ACh40.4%0.0
SMP279_c (L)1Glu40.4%0.0
CB3142 (L)1ACh40.4%0.0
PLP174 (L)1ACh40.4%0.0
CL143 (L)1Glu40.4%0.0
CB2300 (L)2ACh40.4%0.5
CL087 (L)1ACh30.3%0.0
AOTU009 (L)1Glu30.3%0.0
PS181 (L)1ACh30.3%0.0
CL157 (L)1ACh30.3%0.0
PS030 (L)1ACh30.3%0.0
CL172 (L)1ACh30.3%0.0
PS109 (L)1ACh30.3%0.0
CL280 (L)1ACh30.3%0.0
CL075_b (R)1ACh30.3%0.0
AVLP269_a (L)1ACh30.3%0.0
CL216 (L)1ACh30.3%0.0
CL155 (L)1ACh30.3%0.0
CL075_b (L)1ACh30.3%0.0
CL135 (L)1ACh30.3%0.0
PLP013 (L)2ACh30.3%0.3
CL340 (L)2ACh30.3%0.3
PS097 (L)1GABA20.2%0.0
CB3556 (L)1ACh20.2%0.0
CB3049 (L)1ACh20.2%0.0
SLP310 (L)1ACh20.2%0.0
SLP374 (L)1unc20.2%0.0
CL196 (L)1Glu20.2%0.0
SMP281 (L)1Glu20.2%0.0
CB1269 (L)1ACh20.2%0.0
AVLP269_a (R)1ACh20.2%0.0
AVLP225_b2 (L)1ACh20.2%0.0
PLP188 (L)1ACh20.2%0.0
CL152 (L)1Glu20.2%0.0
CL090_e (L)1ACh20.2%0.0
AVLP498 (L)1ACh20.2%0.0
CL071_a (R)1ACh20.2%0.0
SMP527 (L)1ACh20.2%0.0
CL355 (R)2Glu20.2%0.0
IB004_b (L)2Glu20.2%0.0
IB004_a (L)1Glu10.1%0.0
DNp27 (L)1ACh10.1%0.0
SLP463 (R)1unc10.1%0.0
SMP334 (L)1ACh10.1%0.0
PLP001 (L)1GABA10.1%0.0
CL071_b (L)1ACh10.1%0.0
CB3015 (L)1ACh10.1%0.0
LT43 (L)1GABA10.1%0.0
CB3074 (R)1ACh10.1%0.0
SLP003 (L)1GABA10.1%0.0
CL031 (L)1Glu10.1%0.0
CB4070 (R)1ACh10.1%0.0
SMP355 (L)1ACh10.1%0.0
SMP324 (L)1ACh10.1%0.0
SLP168 (L)1ACh10.1%0.0
CB3541 (L)1ACh10.1%0.0
CL018 (L)1Glu10.1%0.0
CB2988 (L)1Glu10.1%0.0
SMP320 (L)1ACh10.1%0.0
SLP324 (L)1ACh10.1%0.0
CB2975 (L)1ACh10.1%0.0
SMP569 (L)1ACh10.1%0.0
LHPV6f5 (L)1ACh10.1%0.0
SLP375 (R)1ACh10.1%0.0
CL302 (L)1ACh10.1%0.0
CB4072 (L)1ACh10.1%0.0
CL147 (L)1Glu10.1%0.0
SLP040 (L)1ACh10.1%0.0
SMP331 (L)1ACh10.1%0.0
SLP402_b (L)1Glu10.1%0.0
CB1242 (L)1Glu10.1%0.0
CL086_c (L)1ACh10.1%0.0
SMP279_a (L)1Glu10.1%0.0
DN1pA (L)1Glu10.1%0.0
AVLP604 (L)1unc10.1%0.0
CB2648 (L)1Glu10.1%0.0
PLP189 (L)1ACh10.1%0.0
CB3603 (L)1ACh10.1%0.0
CL116 (L)1GABA10.1%0.0
SLP465 (L)1ACh10.1%0.0
CB4165 (R)1ACh10.1%0.0
SMP423 (L)1ACh10.1%0.0
WED124 (L)1ACh10.1%0.0
SMP340 (L)1ACh10.1%0.0
CL088_a (L)1ACh10.1%0.0
CL161_a (L)1ACh10.1%0.0
SLP397 (L)1ACh10.1%0.0
SMP339 (L)1ACh10.1%0.0
CL089_b (L)1ACh10.1%0.0
CB3977 (L)1ACh10.1%0.0
CL075_a (R)1ACh10.1%0.0
IB117 (L)1Glu10.1%0.0
SMP201 (L)1Glu10.1%0.0
CRZ02 (L)1unc10.1%0.0
CL107 (L)1ACh10.1%0.0
aMe13 (R)1ACh10.1%0.0
SLP059 (L)1GABA10.1%0.0
DNp104 (L)1ACh10.1%0.0
LHPV3c1 (L)1ACh10.1%0.0
SLP062 (L)1GABA10.1%0.0
SLP130 (L)1ACh10.1%0.0
SLP447 (L)1Glu10.1%0.0
OA-VUMa3 (M)1OA10.1%0.0
AstA1 (R)1GABA10.1%0.0
AstA1 (L)1GABA10.1%0.0