Male CNS – Cell Type Explorer

CL006(R)

4
Total Neurons
Right: 2 | Left: 2
log ratio : 0.00
1,334
Total Synapses
Post: 843 | Pre: 491
log ratio : -0.78
667
Mean Synapses
Post: 421.5 | Pre: 245.5
log ratio : -0.78
ACh(94.0% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (12 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
CentralBrain-unspecified14417.1%0.4820140.9%
LAL(L)11814.0%0.6118036.7%
SMP(R)24629.2%-inf00.0%
LAL(R)8510.1%0.2310020.4%
ICL(R)13716.3%-inf00.0%
SCL(R)688.1%-6.0910.2%
SIP(R)283.3%-4.8110.2%
VES(R)20.2%1.8171.4%
IB70.8%-inf00.0%
AOTU(R)40.5%-2.0010.2%
SLP(R)30.4%-inf00.0%
PLP(R)10.1%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
CL006
%
In
CV
AOTU040 (R)3Glu31.57.9%0.1
AOTU040 (L)3Glu24.56.2%0.1
LAL093 (R)2Glu18.54.6%0.0
LAL093 (L)2Glu174.3%0.2
SMP291 (R)1ACh143.5%0.0
CL130 (R)1ACh112.8%0.0
SMP339 (R)1ACh10.52.6%0.0
CL287 (R)1GABA82.0%0.0
SMP391 (R)2ACh82.0%0.1
SMP554 (R)1GABA7.51.9%0.0
SMP163 (R)1GABA61.5%0.0
PLP199 (R)2GABA61.5%0.3
CB2931 (R)3Glu61.5%0.5
AOTU039 (R)3Glu5.51.4%0.3
AOTU039 (L)3Glu5.51.4%0.1
SMP282 (R)3Glu51.3%0.4
LAL006 (L)3ACh4.51.1%0.9
SMP281 (R)2Glu4.51.1%0.6
CL074 (L)2ACh4.51.1%0.8
SIP017 (R)1Glu4.51.1%0.0
IB084 (L)3ACh4.51.1%0.5
oviIN (R)1GABA41.0%0.0
CL086_b (R)1ACh41.0%0.0
SMP143 (R)2unc41.0%0.2
SMP047 (R)1Glu3.50.9%0.0
SMP279_c (R)1Glu3.50.9%0.0
CB2671 (R)2Glu3.50.9%0.1
CL135 (R)1ACh3.50.9%0.0
CL006 (L)2ACh3.50.9%0.1
CL074 (R)2ACh3.50.9%0.1
CL157 (R)1ACh30.8%0.0
CL005 (R)2ACh30.8%0.3
CL089_a1 (R)1ACh30.8%0.0
LoVC9 (R)1GABA30.8%0.0
LAL061 (L)2GABA30.8%0.7
AOTU038 (R)3Glu30.8%0.4
LAL006 (R)3ACh30.8%0.7
IB084 (R)4ACh30.8%0.3
SMP392 (R)1ACh2.50.6%0.0
CL090_c (R)2ACh2.50.6%0.6
LoVC9 (L)1GABA2.50.6%0.0
SMP375 (R)1ACh2.50.6%0.0
PS088 (L)1GABA2.50.6%0.0
LAL087 (L)3Glu2.50.6%0.3
CB3908 (L)1ACh20.5%0.0
CL318 (R)1GABA20.5%0.0
CB1603 (R)1Glu20.5%0.0
CL154 (R)1Glu20.5%0.0
SMP516 (R)1ACh20.5%0.0
VES018 (L)1GABA20.5%0.0
SMP066 (R)1Glu1.50.4%0.0
CL006 (R)1ACh1.50.4%0.0
SMP375 (L)1ACh1.50.4%0.0
SMP037 (R)1Glu1.50.4%0.0
CL366 (L)1GABA1.50.4%0.0
CL354 (R)1Glu1.50.4%0.0
CRE040 (L)1GABA1.50.4%0.0
SMP143 (L)1unc1.50.4%0.0
SMP069 (R)1Glu1.50.4%0.0
CL355 (L)1Glu1.50.4%0.0
LAL061 (R)1GABA1.50.4%0.0
AOTU041 (L)1GABA1.50.4%0.0
mALB5 (L)1GABA1.50.4%0.0
SMP516 (L)2ACh1.50.4%0.3
AOTU038 (L)2Glu1.50.4%0.3
CL048 (R)1Glu10.3%0.0
CL187 (R)1Glu10.3%0.0
CB2816 (L)1Glu10.3%0.0
AOTU037 (R)1Glu10.3%0.0
CB4242 (L)1ACh10.3%0.0
CL160 (R)1ACh10.3%0.0
CB2425 (L)1GABA10.3%0.0
SMP246 (R)1ACh10.3%0.0
SMP398_a (R)1ACh10.3%0.0
SMP398_b (R)1ACh10.3%0.0
SMP057 (L)1Glu10.3%0.0
PS178 (L)1GABA10.3%0.0
CB3930 (R)1ACh10.3%0.0
CB3908 (R)1ACh10.3%0.0
IB050 (R)1Glu10.3%0.0
SMP158 (R)1ACh10.3%0.0
AVLP749m (R)1ACh10.3%0.0
AOTU064 (R)1GABA10.3%0.0
AN07B004 (R)1ACh10.3%0.0
LAL086 (L)1Glu10.3%0.0
CB2401 (R)1Glu10.3%0.0
CL146 (R)1Glu10.3%0.0
LAL090 (R)1Glu10.3%0.0
LAL088 (R)1Glu10.3%0.0
CL128_b (R)1GABA10.3%0.0
CL014 (R)1Glu10.3%0.0
CL085_c (R)1ACh10.3%0.0
DNpe053 (R)1ACh10.3%0.0
PS178 (R)1GABA10.3%0.0
CL368 (R)1Glu10.3%0.0
IB109 (L)1Glu10.3%0.0
DNpe053 (L)1ACh10.3%0.0
OA-VUMa3 (M)1OA10.3%0.0
AstA1 (L)1GABA10.3%0.0
SMP397 (R)1ACh10.3%0.0
CL005 (L)1ACh10.3%0.0
LAL090 (L)1Glu10.3%0.0
SMP039 (R)2unc10.3%0.0
CL091 (R)2ACh10.3%0.0
AOTU003 (R)2ACh10.3%0.0
SMP424 (R)2Glu10.3%0.0
SMP201 (R)1Glu10.3%0.0
CL089_c (R)1ACh10.3%0.0
CL090_e (R)2ACh10.3%0.0
CL089_b (R)2ACh10.3%0.0
AOTU015 (R)1ACh10.3%0.0
AOTU008 (R)2ACh10.3%0.0
PS088 (R)1GABA10.3%0.0
CL090_b (R)2ACh10.3%0.0
PS008_a2 (R)1Glu0.50.1%0.0
LAL067 (L)1GABA0.50.1%0.0
CL169 (R)1ACh0.50.1%0.0
CB3044 (L)1ACh0.50.1%0.0
IB009 (R)1GABA0.50.1%0.0
SMP057 (R)1Glu0.50.1%0.0
SMP470 (R)1ACh0.50.1%0.0
SMP079 (R)1GABA0.50.1%0.0
SMP055 (R)1Glu0.50.1%0.0
SMP081 (R)1Glu0.50.1%0.0
SMP528 (R)1Glu0.50.1%0.0
SMP327 (R)1ACh0.50.1%0.0
LAL086 (R)1Glu0.50.1%0.0
AOTU004 (L)1ACh0.50.1%0.0
SMP323 (R)1ACh0.50.1%0.0
CL190 (R)1Glu0.50.1%0.0
PS109 (R)1ACh0.50.1%0.0
CL189 (R)1Glu0.50.1%0.0
CL147 (R)1Glu0.50.1%0.0
SMP312 (R)1ACh0.50.1%0.0
CB2425 (R)1GABA0.50.1%0.0
SMP420 (R)1ACh0.50.1%0.0
SMP393 (R)1ACh0.50.1%0.0
CL090_d (R)1ACh0.50.1%0.0
SMP271 (R)1GABA0.50.1%0.0
SMP284_b (R)1Glu0.50.1%0.0
CB3906 (R)1ACh0.50.1%0.0
CL013 (R)1Glu0.50.1%0.0
AOTU013 (R)1ACh0.50.1%0.0
CB0029 (R)1ACh0.50.1%0.0
LT76 (R)1ACh0.50.1%0.0
VES018 (R)1GABA0.50.1%0.0
CL344_b (R)1unc0.50.1%0.0
PFL1 (R)1ACh0.50.1%0.0
AVLP590 (R)1Glu0.50.1%0.0
CRE040 (R)1GABA0.50.1%0.0
AVLP531 (R)1GABA0.50.1%0.0
SMP383 (L)1ACh0.50.1%0.0
AstA1 (R)1GABA0.50.1%0.0
OA-VUMa6 (M)1OA0.50.1%0.0
AOTU041 (R)1GABA0.50.1%0.0
IB109 (R)1Glu0.50.1%0.0
SMP091 (R)1GABA0.50.1%0.0
SMP358 (R)1ACh0.50.1%0.0
CB3044 (R)1ACh0.50.1%0.0
CL011 (R)1Glu0.50.1%0.0
CB4069 (L)1ACh0.50.1%0.0
CB3360 (R)1Glu0.50.1%0.0
SMP251 (R)1ACh0.50.1%0.0
CL235 (R)1Glu0.50.1%0.0
CB1072 (L)1ACh0.50.1%0.0
IB022 (R)1ACh0.50.1%0.0
AOTU034 (R)1ACh0.50.1%0.0
CL087 (R)1ACh0.50.1%0.0
PS096 (L)1GABA0.50.1%0.0
LHPD1b1 (R)1Glu0.50.1%0.0
PVLP207m (R)1ACh0.50.1%0.0
CL008 (R)1Glu0.50.1%0.0
CL180 (R)1Glu0.50.1%0.0
SMP588 (L)1unc0.50.1%0.0
SMP546 (R)1ACh0.50.1%0.0
DN1pB (R)1Glu0.50.1%0.0
AOTU007_b (L)1ACh0.50.1%0.0
CL159 (L)1ACh0.50.1%0.0
5-HTPMPV01 (R)15-HT0.50.1%0.0
AOTU064 (L)1GABA0.50.1%0.0
CL135 (L)1ACh0.50.1%0.0
CL053 (R)1ACh0.50.1%0.0
LT34 (R)1GABA0.50.1%0.0
VES041 (R)1GABA0.50.1%0.0
oviIN (L)1GABA0.50.1%0.0

Outputs

downstream
partner
#NTconns
CL006
%
Out
CV
IB084 (R)4ACh50.58.5%0.3
LAL088 (R)2Glu36.56.1%0.2
LoVC9 (L)1GABA284.7%0.0
IB084 (L)3ACh27.54.6%0.2
AOTU041 (L)2GABA274.5%0.5
AOTU040 (R)3Glu26.54.4%0.2
LoVC9 (R)1GABA244.0%0.0
AOTU040 (L)3Glu213.5%0.1
LAL088 (L)1Glu20.53.4%0.0
LAL093 (R)2Glu172.9%0.1
LAL087 (R)5Glu16.52.8%0.3
AOTU041 (R)2GABA162.7%0.2
LAL093 (L)2Glu15.52.6%0.1
AOTU037 (L)3Glu13.52.3%0.2
AOTU037 (R)2Glu12.52.1%0.0
LAL094 (R)5Glu12.52.1%0.7
VES018 (L)1GABA122.0%0.0
AOTU039 (R)3Glu11.51.9%0.3
AOTU039 (L)3Glu111.8%0.7
LAL089 (L)3Glu111.8%0.4
LAL087 (L)5Glu111.8%0.3
LC33 (L)1Glu101.7%0.0
LAL094 (L)7Glu9.51.6%1.2
LC33 (R)1Glu8.51.4%0.0
LAL086 (R)2Glu8.51.4%0.1
LAL086 (L)2Glu7.51.3%0.7
LAL089 (R)3Glu7.51.3%0.4
LAL006 (L)2ACh6.51.1%0.8
LAL114 (L)1ACh6.51.1%0.0
VES018 (R)1GABA6.51.1%0.0
CL006 (L)2ACh6.51.1%0.5
LAL006 (R)3ACh6.51.1%0.5
CB0316 (L)1ACh50.8%0.0
VES054 (R)1ACh4.50.8%0.0
AOTU038 (L)4Glu4.50.8%0.5
LAL114 (R)1ACh40.7%0.0
AOTU019 (R)1GABA3.50.6%0.0
AOTU019 (L)1GABA30.5%0.0
CB1547 (L)1ACh30.5%0.0
CL005 (R)2ACh30.5%0.7
AOTU038 (R)4Glu30.5%0.3
VES054 (L)1ACh2.50.4%0.0
SMP079 (R)1GABA2.50.4%0.0
LAL090 (R)2Glu2.50.4%0.2
LoVC12 (R)1GABA2.50.4%0.0
CB3992 (L)3Glu2.50.4%0.6
PS084 (L)3Glu20.3%0.4
LoVC12 (L)1GABA20.3%0.0
LAL061 (L)1GABA1.50.3%0.0
CL006 (R)1ACh1.50.3%0.0
PS178 (R)1GABA1.50.3%0.0
VES041 (L)1GABA1.50.3%0.0
CB2094 (L)1ACh1.50.3%0.0
mALB5 (R)1GABA10.2%0.0
CB1547 (R)1ACh10.2%0.0
PS084 (R)1Glu10.2%0.0
LT51 (R)1Glu10.2%0.0
AOTU064 (R)1GABA10.2%0.0
SIP110m_b (L)1ACh10.2%0.0
PS178 (L)1GABA10.2%0.0
AVLP563 (R)1ACh10.2%0.0
CB0316 (R)1ACh10.2%0.0
LAL083 (L)1Glu10.2%0.0
PS065 (L)1GABA10.2%0.0
DNp13 (R)1ACh10.2%0.0
AOTU003 (L)1ACh10.2%0.0
CB2425 (L)2GABA10.2%0.0
PLP021 (R)1ACh0.50.1%0.0
LAL096 (L)1Glu0.50.1%0.0
LAL123 (L)1unc0.50.1%0.0
VES092 (L)1GABA0.50.1%0.0
PS270 (R)1ACh0.50.1%0.0
PLP021 (L)1ACh0.50.1%0.0
CB2981 (L)1ACh0.50.1%0.0
LAL090 (L)1Glu0.50.1%0.0
CB1705 (L)1GABA0.50.1%0.0
CB2425 (R)1GABA0.50.1%0.0
CL328 (R)1ACh0.50.1%0.0
IB071 (R)1ACh0.50.1%0.0
LAL177 (R)1ACh0.50.1%0.0
WED071 (R)1Glu0.50.1%0.0
PFL1 (R)1ACh0.50.1%0.0
CL053 (R)1ACh0.50.1%0.0
LoVC11 (R)1GABA0.50.1%0.0
PS011 (L)1ACh0.50.1%0.0
ExR8 (R)1ACh0.50.1%0.0
LAL191 (L)1ACh0.50.1%0.0
CL005 (L)1ACh0.50.1%0.0
CB0361 (R)1ACh0.50.1%0.0
LAL067 (R)1GABA0.50.1%0.0
AOTU030 (R)1ACh0.50.1%0.0
AOTU034 (R)1ACh0.50.1%0.0
AOTU007_b (R)1ACh0.50.1%0.0
SIP017 (R)1Glu0.50.1%0.0
SMP188 (L)1ACh0.50.1%0.0
SMP013 (R)1ACh0.50.1%0.0
SIP110m_b (R)1ACh0.50.1%0.0
LAL169 (L)1ACh0.50.1%0.0
FB5A (L)1GABA0.50.1%0.0
LoVC22 (L)1DA0.50.1%0.0
LAL194 (L)1ACh0.50.1%0.0
PLP092 (R)1ACh0.50.1%0.0
AOTU042 (L)1GABA0.50.1%0.0
aSP22 (R)1ACh0.50.1%0.0
mALD1 (R)1GABA0.50.1%0.0