Male CNS – Cell Type Explorer

CB4156(R)

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
548
Total Synapses
Post: 320 | Pre: 228
log ratio : -0.49
548
Mean Synapses
Post: 320 | Pre: 228
log ratio : -0.49
unc(45.6% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (6 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
SMP(R)14946.6%-0.3112052.6%
SLP(R)14545.3%-0.957532.9%
CentralBrain-unspecified175.3%-0.28146.1%
SIP(R)72.2%0.1983.5%
ATL(R)20.6%2.0083.5%
CRE(R)00.0%inf31.3%

Connectivity

Inputs

upstream
partner
#NTconns
CB4156
%
In
CV
FS4C (L)13ACh5819.1%0.4
CB1617 (R)7Glu258.2%0.6
FS1B_b (L)9ACh258.2%0.4
SLP359 (R)2ACh237.6%0.2
FS4B (L)8ACh144.6%0.6
PLP122_a (R)1ACh134.3%0.0
CB4138 (R)3Glu93.0%0.9
AstA1 (L)1GABA82.6%0.0
SMP167 (R)4unc82.6%0.4
FS1B_b (R)6ACh82.6%0.6
SLP373 (R)1unc72.3%0.0
AstA1 (R)1GABA72.3%0.0
CB4022 (R)2ACh72.3%0.4
CB1178 (R)2Glu62.0%0.3
SMP599 (L)1Glu51.6%0.0
GNG517 (L)1ACh51.6%0.0
SMP086 (R)1Glu31.0%0.0
CB4129 (R)1Glu31.0%0.0
CB4139 (R)1ACh31.0%0.0
SMP187 (L)1ACh20.7%0.0
SMP047 (R)1Glu20.7%0.0
FS1B_a (L)1ACh20.7%0.0
SMP166 (R)1GABA20.7%0.0
LHPV5a3 (R)1ACh20.7%0.0
LHPV6h1_b (R)1ACh20.7%0.0
CB3318 (R)1ACh20.7%0.0
SLP173 (R)1Glu20.7%0.0
SLP001 (R)1Glu20.7%0.0
aDT4 (R)15-HT20.7%0.0
LPN_b (R)1ACh20.7%0.0
LoVP67 (R)1ACh20.7%0.0
SMP183 (R)1ACh20.7%0.0
FS3_d (L)2ACh20.7%0.0
CB4107 (R)2ACh20.7%0.0
CB4023 (R)1ACh10.3%0.0
LHPV6f3_b (L)1ACh10.3%0.0
CB3084 (R)1Glu10.3%0.0
SLP387 (R)1Glu10.3%0.0
ExR3 (R)15-HT10.3%0.0
CB4127 (R)1unc10.3%0.0
DNpe048 (R)1unc10.3%0.0
SIP032 (R)1ACh10.3%0.0
SLP266 (R)1Glu10.3%0.0
FB9C (R)1Glu10.3%0.0
FS4A (L)1ACh10.3%0.0
CB4155 (R)1GABA10.3%0.0
FB7M (R)1Glu10.3%0.0
ATL009 (R)1GABA10.3%0.0
FS1B_a (R)1ACh10.3%0.0
CB2600 (R)1Glu10.3%0.0
ATL013 (R)1ACh10.3%0.0
CB2784 (R)1GABA10.3%0.0
LHPD5d1 (R)1ACh10.3%0.0
CB3055 (R)1ACh10.3%0.0
SMP409 (R)1ACh10.3%0.0
SLP347 (R)1Glu10.3%0.0
CB1352 (R)1Glu10.3%0.0
LHPV5e2 (R)1ACh10.3%0.0
CB3556 (L)1ACh10.3%0.0
SLP337 (R)1Glu10.3%0.0
CB1685 (R)1Glu10.3%0.0
CB2648 (R)1Glu10.3%0.0
CB1059 (R)1Glu10.3%0.0
SLP211 (R)1ACh10.3%0.0
VP2+Z_lvPN (R)1ACh10.3%0.0
AVLP097 (R)1ACh10.3%0.0
PPL203 (R)1unc10.3%0.0
SLP457 (R)1unc10.3%0.0
LoVP64 (R)1Glu10.3%0.0
DNp25 (R)1GABA10.3%0.0
SMP184 (R)1ACh10.3%0.0

Outputs

downstream
partner
#NTconns
CB4156
%
Out
CV
LPN_a (R)2ACh195.5%0.4
VP1l+_lvPN (R)3ACh185.2%0.7
SMP345 (R)2Glu154.3%0.6
SMP188 (R)1ACh144.1%0.0
VP2+Z_lvPN (R)2ACh113.2%0.1
SMP530_b (R)1Glu102.9%0.0
SMP337 (R)1Glu92.6%0.0
SMP018 (R)2ACh92.6%0.8
SMP061 (R)1Glu82.3%0.0
SMP532_b (R)1Glu82.3%0.0
DGI (R)1Glu82.3%0.0
ATL024 (R)1Glu72.0%0.0
IB042 (R)1Glu72.0%0.0
LHPD5a1 (R)1Glu72.0%0.0
SLP414 (R)2Glu61.7%0.3
SMP371_a (R)1Glu51.4%0.0
SMP371_b (R)1Glu51.4%0.0
FB7M (R)1Glu51.4%0.0
SMP532_a (R)1Glu51.4%0.0
SMP022 (R)1Glu51.4%0.0
SMP530_a (R)1Glu51.4%0.0
SLP066 (R)1Glu51.4%0.0
SMP539 (R)2Glu51.4%0.2
SMP404 (R)3ACh51.4%0.6
MBON35 (R)1ACh41.2%0.0
CB0946 (R)1ACh41.2%0.0
SMP046 (R)1Glu41.2%0.0
CL008 (R)2Glu41.2%0.5
SLP324 (R)3ACh41.2%0.4
SLP320 (R)1Glu30.9%0.0
CB4133 (R)1Glu30.9%0.0
FB3C (R)1GABA30.9%0.0
SMP505 (L)1ACh30.9%0.0
DN1a (R)1Glu30.9%0.0
PRW003 (R)1Glu30.9%0.0
SMP001 (R)1unc30.9%0.0
SMP057 (R)2Glu30.9%0.3
SMP081 (R)2Glu30.9%0.3
SMP535 (R)2Glu30.9%0.3
CB2814 (R)2Glu30.9%0.3
SMP426 (R)2Glu30.9%0.3
CB1685 (R)2Glu30.9%0.3
SMP527 (R)1ACh20.6%0.0
CL356 (R)1ACh20.6%0.0
IB018 (R)1ACh20.6%0.0
SA3 (R)1Glu20.6%0.0
CB4138 (R)1Glu20.6%0.0
SMP409 (R)1ACh20.6%0.0
CB3252 (R)1Glu20.6%0.0
SMP167 (R)1unc20.6%0.0
PLP121 (R)1ACh20.6%0.0
SMP201 (R)1Glu20.6%0.0
SMP391 (R)1ACh20.6%0.0
CB4124 (R)1GABA20.6%0.0
SMP505 (R)1ACh20.6%0.0
AstA1 (L)1GABA20.6%0.0
CB2517 (R)2Glu20.6%0.0
SA1_b (R)2Glu20.6%0.0
SMP497 (R)2Glu20.6%0.0
FB1J (R)1Glu10.3%0.0
CB2638 (R)1ACh10.3%0.0
SMP408_b (R)1ACh10.3%0.0
SMP540 (R)1Glu10.3%0.0
SMP305 (R)1unc10.3%0.0
SLP387 (R)1Glu10.3%0.0
DNp44 (R)1ACh10.3%0.0
FB7C (R)1Glu10.3%0.0
CB4155 (R)1GABA10.3%0.0
CB1984 (R)1Glu10.3%0.0
LHPV5g1_a (R)1ACh10.3%0.0
FB8D (R)1Glu10.3%0.0
CB3050 (R)1ACh10.3%0.0
SA1_c (R)1Glu10.3%0.0
LHAV6c1 (R)1Glu10.3%0.0
FB5G_a (R)1Glu10.3%0.0
CB4091 (R)1Glu10.3%0.0
CB1011 (R)1Glu10.3%0.0
SMP166 (R)1GABA10.3%0.0
LHPV6h1_b (R)1ACh10.3%0.0
SMP370 (R)1Glu10.3%0.0
SMP182 (L)1ACh10.3%0.0
SLP150 (R)1ACh10.3%0.0
SMP251 (R)1ACh10.3%0.0
SMP222 (R)1Glu10.3%0.0
CB4023 (R)1ACh10.3%0.0
DN1pA (R)1Glu10.3%0.0
FB4P_a (R)1Glu10.3%0.0
SLP028 (R)1Glu10.3%0.0
SLP012 (R)1Glu10.3%0.0
LHPV6a9_b (R)1ACh10.3%0.0
CB1352 (R)1Glu10.3%0.0
SLP211 (R)1ACh10.3%0.0
CB4127 (R)1unc10.3%0.0
FB3E (R)1GABA10.3%0.0
LHPV4l1 (R)1Glu10.3%0.0
FB6M (R)1Glu10.3%0.0
SLP373 (R)1unc10.3%0.0
DNpe035 (R)1ACh10.3%0.0
CL179 (R)1Glu10.3%0.0
SMP183 (R)1ACh10.3%0.0
SMP254 (R)1ACh10.3%0.0
LHPD5d1 (R)1ACh10.3%0.0
SMP235 (R)1Glu10.3%0.0
LHPV5l1 (R)1ACh10.3%0.0
SMP185 (R)1ACh10.3%0.0
SMP181 (R)1unc10.3%0.0
DNp25 (R)1GABA10.3%0.0
LHPV5e1 (R)1ACh10.3%0.0
5thsLNv_LNd6 (R)1ACh10.3%0.0
FB1G (R)1ACh10.3%0.0