Male CNS – Cell Type Explorer

CB3998

5
Total Neurons
Right: 2 | Left: 3
log ratio : 0.58
2,190
Total Synapses
Right: 860 | Left: 1,330
log ratio : 0.63
438
Mean Synapses
Right: 430 | Left: 443.3
log ratio : 0.04
Glu(83.4% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (8 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
SPS51536.1%-0.2144458.3%
ICL53237.3%-2.2211415.0%
IB15310.7%0.0616021.0%
PLP835.8%-2.57141.8%
GOR694.8%-1.79202.6%
CentralBrain-unspecified463.2%-4.5220.3%
SCL292.0%-1.8681.0%
SMP10.1%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
CB3998
%
In
CV
CL2356Glu41.615.5%0.3
PS2686ACh24.89.3%0.5
PS2695ACh155.6%0.6
WED0124GABA103.7%0.5
PS0968GABA8.83.3%0.5
OA-VUMa6 (M)2OA7.22.7%0.3
PS1582ACh6.42.4%0.0
CB05302Glu5.82.2%0.0
IB0384Glu5.62.1%0.7
CL2536GABA5.21.9%0.5
LoVCLo12ACh4.41.6%0.0
PS0975GABA4.41.6%0.8
PLP0192GABA41.5%0.0
CB18339Glu3.81.4%0.5
CB39985Glu3.21.2%0.3
AN06B0092GABA31.1%0.0
LoVP266ACh2.61.0%0.6
GNG6382GABA2.61.0%0.0
LC296ACh2.40.9%0.6
PLP2183Glu2.40.9%0.2
SMP5272ACh2.40.9%0.0
PLP0552ACh2.20.8%0.1
AVLP4861GABA20.7%0.0
aMe_TBD12GABA20.7%0.0
CL3543Glu20.7%0.0
CB14203Glu20.7%0.3
CB13533Glu20.7%0.1
LoVP186ACh20.7%0.5
PS1802ACh20.7%0.0
CL2524GABA1.80.7%0.3
CL0082Glu1.80.7%0.0
PLP0922ACh1.80.7%0.0
CB20745Glu1.80.7%0.3
IB004_b4Glu1.60.6%0.3
LAL188_a3ACh1.60.6%0.2
LoVC72GABA1.60.6%0.0
CL3662GABA1.60.6%0.0
LoVC154GABA1.60.6%0.2
IB0082GABA1.40.5%0.0
PS1122Glu1.40.5%0.0
SMP0332Glu1.40.5%0.0
CL0484Glu1.40.5%0.2
GNG5791GABA1.20.4%0.0
CL0802ACh1.20.4%0.7
LoVP1012ACh1.20.4%0.0
CL0743ACh1.20.4%0.0
CB26114Glu1.20.4%0.0
CL0112Glu1.20.4%0.0
CL1313ACh1.20.4%0.2
CB23124Glu1.20.4%0.3
PLP0521ACh10.4%0.0
PS2701ACh10.4%0.0
CB10723ACh10.4%0.6
LC364ACh10.4%0.3
PVLP1493ACh10.4%0.3
LoVP502ACh10.4%0.0
PS0922GABA10.4%0.0
PS0073Glu10.4%0.2
CB26251ACh0.80.3%0.0
DNp361Glu0.80.3%0.0
LoVP931ACh0.80.3%0.0
OA-VUMa4 (M)2OA0.80.3%0.5
PLP0802Glu0.80.3%0.0
AVLP5312GABA0.80.3%0.0
PS0012GABA0.80.3%0.0
LAL0253ACh0.80.3%0.2
SMP0552Glu0.80.3%0.0
PLP0322ACh0.80.3%0.0
CL1672ACh0.80.3%0.0
CL1301ACh0.60.2%0.0
CB17311ACh0.60.2%0.0
AstA11GABA0.60.2%0.0
LoVC251ACh0.60.2%0.0
AVLP2101ACh0.60.2%0.0
CB02801ACh0.60.2%0.0
CB40701ACh0.60.2%0.0
SMP371_b1Glu0.60.2%0.0
CL090_e2ACh0.60.2%0.3
LHPV3a12ACh0.60.2%0.0
LoVCLo32OA0.60.2%0.0
CL088_a2ACh0.60.2%0.0
CB41022ACh0.60.2%0.0
PLP0542ACh0.60.2%0.0
DNp422ACh0.60.2%0.0
AN27X0092ACh0.60.2%0.0
CL1582ACh0.60.2%0.0
PS005_e3Glu0.60.2%0.0
CB22501Glu0.40.1%0.0
CL1521Glu0.40.1%0.0
CL2341Glu0.40.1%0.0
CL0131Glu0.40.1%0.0
CL1511ACh0.40.1%0.0
AOTU0591GABA0.40.1%0.0
CL2701ACh0.40.1%0.0
CL0101Glu0.40.1%0.0
AN19B0171ACh0.40.1%0.0
AN17A0501ACh0.40.1%0.0
PLP0961ACh0.40.1%0.0
VES0011Glu0.40.1%0.0
PLP0531ACh0.40.1%0.0
AN09B0231ACh0.40.1%0.0
AN08B0101ACh0.40.1%0.0
PS0201ACh0.40.1%0.0
PLP1061ACh0.40.1%0.0
SMP5931GABA0.40.1%0.0
AVLP710m1GABA0.40.1%0.0
PS3572ACh0.40.1%0.0
PLP0931ACh0.40.1%0.0
AVLP2111ACh0.40.1%0.0
CL1892Glu0.40.1%0.0
5-HTPMPV0325-HT0.40.1%0.0
DNpe0372ACh0.40.1%0.0
LoVC51GABA0.20.1%0.0
LoVP911GABA0.20.1%0.0
CL128a1GABA0.20.1%0.0
SMP371_a1Glu0.20.1%0.0
PS005_d1Glu0.20.1%0.0
AVLP274_b1ACh0.20.1%0.0
CL3081ACh0.20.1%0.0
PS1071ACh0.20.1%0.0
PS1401Glu0.20.1%0.0
SMP0691Glu0.20.1%0.0
WED1251ACh0.20.1%0.0
AVLP0461ACh0.20.1%0.0
SAD0441ACh0.20.1%0.0
AVLP4921ACh0.20.1%0.0
CL0661GABA0.20.1%0.0
CL1071ACh0.20.1%0.0
CL3091ACh0.20.1%0.0
PLP2601unc0.20.1%0.0
IB1201Glu0.20.1%0.0
PS1111Glu0.20.1%0.0
VES0641Glu0.20.1%0.0
PLP1721GABA0.20.1%0.0
SAD0721GABA0.20.1%0.0
SIP020_b1Glu0.20.1%0.0
SMP0681Glu0.20.1%0.0
IB004_a1Glu0.20.1%0.0
CB22591Glu0.20.1%0.0
PS1091ACh0.20.1%0.0
CL2731ACh0.20.1%0.0
CL128_c1GABA0.20.1%0.0
CL128_a1GABA0.20.1%0.0
CB34661ACh0.20.1%0.0
LT641ACh0.20.1%0.0
AVLP4421ACh0.20.1%0.0
SAD0451ACh0.20.1%0.0
LC35a1ACh0.20.1%0.0
PLP0671ACh0.20.1%0.0
CB22811ACh0.20.1%0.0
AVLP1661ACh0.20.1%0.0
CB26591ACh0.20.1%0.0
AN06B0401GABA0.20.1%0.0
GNG3111ACh0.20.1%0.0
DNp691ACh0.20.1%0.0
PS0881GABA0.20.1%0.0
PPL2021DA0.20.1%0.0
PLP2431ACh0.20.1%0.0
MBON031Glu0.20.1%0.0
DNpe0161ACh0.20.1%0.0
CB40711ACh0.20.1%0.0
LAL1871ACh0.20.1%0.0
CB12691ACh0.20.1%0.0
LHPV3a3_b1ACh0.20.1%0.0
IB0171ACh0.20.1%0.0
GNG6621ACh0.20.1%0.0
PLP0561ACh0.20.1%0.0
AVLP5791ACh0.20.1%0.0
CL3141GABA0.20.1%0.0
SMP5471ACh0.20.1%0.0
PS347_b1Glu0.20.1%0.0
PLP2291ACh0.20.1%0.0
PLP2091ACh0.20.1%0.0
PS3061GABA0.20.1%0.0
DNp471ACh0.20.1%0.0
DNp271ACh0.20.1%0.0
PS008_b1Glu0.20.1%0.0
PS1431Glu0.20.1%0.0
CB16361Glu0.20.1%0.0
CL1681ACh0.20.1%0.0
CL0871ACh0.20.1%0.0
CL085_b1ACh0.20.1%0.0
LoVC181DA0.20.1%0.0
AVLP0161Glu0.20.1%0.0
DNae0091ACh0.20.1%0.0
LC35b1ACh0.20.1%0.0
LHPV2i11ACh0.20.1%0.0
SMP1561ACh0.20.1%0.0
PLP2171ACh0.20.1%0.0
CL1691ACh0.20.1%0.0
CB18761ACh0.20.1%0.0
PS005_a1Glu0.20.1%0.0
CL1841Glu0.20.1%0.0
CL128_b1GABA0.20.1%0.0
PVLP0651ACh0.20.1%0.0
AVLP5251ACh0.20.1%0.0
AVLP4831unc0.20.1%0.0
PS0031Glu0.20.1%0.0
PS0021GABA0.20.1%0.0
DNp491Glu0.20.1%0.0
OA-VUMa3 (M)1OA0.20.1%0.0
OA-AL2i11unc0.20.1%0.0

Outputs

downstream
partner
#NTconns
CB3998
%
Out
CV
LoVC156GABA33.68.2%0.6
PS2688ACh33.28.1%0.5
PLP0922ACh30.27.3%0.0
IB0384Glu22.45.4%0.1
PS2694ACh15.83.8%0.4
DNbe0042Glu14.43.5%0.0
CB30444ACh12.83.1%0.6
PS1122Glu11.42.8%0.0
CL128_d2GABA112.7%0.0
CL128_c2GABA10.62.6%0.0
LoVC22GABA10.22.5%0.0
PS0026GABA8.62.1%0.7
CB18339Glu8.22.0%0.5
CB10726ACh7.21.7%0.7
CL128_b2GABA6.41.6%0.0
PLP0932ACh5.21.3%0.0
DNa092ACh51.2%0.0
IB0952Glu4.81.2%0.0
IB0082GABA4.81.2%0.0
CB20748Glu4.61.1%0.3
PLP2082ACh4.61.1%0.0
SMP0554Glu4.41.1%0.6
aSP222ACh4.21.0%0.0
LAL1412ACh3.80.9%0.0
CL3082ACh3.80.9%0.0
DNp592GABA3.80.9%0.0
CL128_e2GABA3.80.9%0.0
CL1896Glu3.60.9%0.6
PLP0322ACh3.60.9%0.0
AVLP0162Glu3.40.8%0.0
CB13535Glu3.40.8%0.3
CL2356Glu3.20.8%0.5
CB39985Glu3.20.8%0.3
LoVC172GABA30.7%0.0
CL0011Glu2.80.7%0.0
CL128_a2GABA2.60.6%0.0
PS0581ACh2.40.6%0.0
IB0092GABA2.40.6%0.0
PS1582ACh2.40.6%0.0
CL1844Glu2.20.5%0.5
CB16362Glu2.20.5%0.0
CB23124Glu2.20.5%0.5
PLP2182Glu20.5%0.0
DNp1032ACh20.5%0.0
DNpe0401ACh1.60.4%0.0
SIP020_b1Glu1.60.4%0.0
SMP5432GABA1.60.4%0.0
PS1802ACh1.60.4%0.0
PVLP0621ACh1.40.3%0.0
CL3212ACh1.40.3%0.0
PS1112Glu1.40.3%0.0
DNpe0371ACh1.20.3%0.0
CB41033ACh1.20.3%0.4
LoVP183ACh1.20.3%0.0
OA-VUMa6 (M)2OA10.2%0.2
IB0102GABA10.2%0.0
CL0483Glu10.2%0.0
PS1392Glu10.2%0.0
DNp1042ACh10.2%0.0
PVLP1001GABA0.80.2%0.0
PPM12041Glu0.80.2%0.0
PLP0542ACh0.80.2%0.5
PS2671ACh0.80.2%0.0
CB14202Glu0.80.2%0.5
CL1161GABA0.80.2%0.0
PLP0192GABA0.80.2%0.0
LAL188_b2ACh0.80.2%0.0
CB04292ACh0.80.2%0.0
PS0073Glu0.80.2%0.2
AOTU0331ACh0.60.1%0.0
PLP1631ACh0.60.1%0.0
LoVC31GABA0.60.1%0.0
IB1171Glu0.60.1%0.0
PS0911GABA0.60.1%0.0
CB19582Glu0.60.1%0.3
PS1641GABA0.60.1%0.0
SMP4592ACh0.60.1%0.3
CL128a2GABA0.60.1%0.3
CB09312Glu0.60.1%0.0
AVLP4422ACh0.60.1%0.0
DNp072ACh0.60.1%0.0
CB41022ACh0.60.1%0.0
PS0882GABA0.60.1%0.0
PLP2461ACh0.40.1%0.0
CL1751Glu0.40.1%0.0
CB26111Glu0.40.1%0.0
SMP3931ACh0.40.1%0.0
CL1801Glu0.40.1%0.0
CL1551ACh0.40.1%0.0
PLP2601unc0.40.1%0.0
CL1591ACh0.40.1%0.0
AVLP2111ACh0.40.1%0.0
PLP0341Glu0.40.1%0.0
PLP1721GABA0.40.1%0.0
CL3231ACh0.40.1%0.0
CB12221ACh0.40.1%0.0
PS1821ACh0.40.1%0.0
CL029_a1Glu0.40.1%0.0
LoVC11Glu0.40.1%0.0
CL2511ACh0.40.1%0.0
DNbe0071ACh0.40.1%0.0
CB40711ACh0.40.1%0.0
AOTU0641GABA0.40.1%0.0
AOTU0421GABA0.40.1%0.0
LoVCLo31OA0.40.1%0.0
CL2491ACh0.40.1%0.0
SMP5931GABA0.40.1%0.0
PS1881Glu0.40.1%0.0
AVLP4921ACh0.40.1%0.0
CL1111ACh0.40.1%0.0
LoVC51GABA0.40.1%0.0
DNa161ACh0.40.1%0.0
CB17871ACh0.40.1%0.0
CL2131ACh0.40.1%0.0
CL0531ACh0.40.1%0.0
CL2522GABA0.40.1%0.0
OA-ASM11OA0.40.1%0.0
OA-AL2i21OA0.40.1%0.0
OA-VUMa3 (M)1OA0.40.1%0.0
PS005_a2Glu0.40.1%0.0
OA-VUMa4 (M)1OA0.40.1%0.0
DNp471ACh0.40.1%0.0
LAL0252ACh0.40.1%0.0
IB1092Glu0.40.1%0.0
CB40702ACh0.40.1%0.0
SMP381_a2ACh0.40.1%0.0
PLP0522ACh0.40.1%0.0
CL1692ACh0.40.1%0.0
PS0292ACh0.40.1%0.0
DNae0092ACh0.40.1%0.0
DNpe0562ACh0.40.1%0.0
SIP020_a2Glu0.40.1%0.0
LAL0092ACh0.40.1%0.0
CL2862ACh0.40.1%0.0
PS1401Glu0.20.0%0.0
PLP2431ACh0.20.0%0.0
CL090_a1ACh0.20.0%0.0
PS0381ACh0.20.0%0.0
CL1601ACh0.20.0%0.0
PS0961GABA0.20.0%0.0
CL2531GABA0.20.0%0.0
CL161_b1ACh0.20.0%0.0
SLP0761Glu0.20.0%0.0
PLP0221GABA0.20.0%0.0
DNpe0281ACh0.20.0%0.0
AVLP708m1ACh0.20.0%0.0
GNG6381GABA0.20.0%0.0
DNg1111Glu0.20.0%0.0
AN06B0091GABA0.20.0%0.0
MeVC21ACh0.20.0%0.0
MeVC4b1ACh0.20.0%0.0
MeVC111ACh0.20.0%0.0
PS005_e1Glu0.20.0%0.0
PS1081Glu0.20.0%0.0
PS1461Glu0.20.0%0.0
SMP5441GABA0.20.0%0.0
PVLP1071Glu0.20.0%0.0
CL0381Glu0.20.0%0.0
CB26251ACh0.20.0%0.0
SMP0481ACh0.20.0%0.0
CB16421ACh0.20.0%0.0
DNpe0391ACh0.20.0%0.0
CB22591Glu0.20.0%0.0
PS1091ACh0.20.0%0.0
LAL188_a1ACh0.20.0%0.0
PS1491Glu0.20.0%0.0
CL0051ACh0.20.0%0.0
CL1761Glu0.20.0%0.0
SMP3941ACh0.20.0%0.0
LC39a1Glu0.20.0%0.0
CL1681ACh0.20.0%0.0
DNpe0531ACh0.20.0%0.0
CB22811ACh0.20.0%0.0
SMP1851ACh0.20.0%0.0
PS0031Glu0.20.0%0.0
CL3191ACh0.20.0%0.0
DNpe0451ACh0.20.0%0.0
DNp681ACh0.20.0%0.0
DNp701ACh0.20.0%0.0
DNp691ACh0.20.0%0.0
DNp081Glu0.20.0%0.0
SMP0011unc0.20.0%0.0
PS2701ACh0.20.0%0.0
LAL1341GABA0.20.0%0.0
CL0741ACh0.20.0%0.0
CB18511Glu0.20.0%0.0
LC291ACh0.20.0%0.0
SIP020b1Glu0.20.0%0.0
PLP2221ACh0.20.0%0.0
CB33761ACh0.20.0%0.0
CB06821GABA0.20.0%0.0
LT351GABA0.20.0%0.0
SMP3951ACh0.20.0%0.0
PLP0091Glu0.20.0%0.0
WED1251ACh0.20.0%0.0
WED0121GABA0.20.0%0.0
PS0181ACh0.20.0%0.0
PS0011GABA0.20.0%0.0
CL1401GABA0.20.0%0.0
PS0201ACh0.20.0%0.0
DNpe0221ACh0.20.0%0.0
DNp091ACh0.20.0%0.0
SAD0731GABA0.20.0%0.0
CB05301Glu0.20.0%0.0
CB19751Glu0.20.0%0.0
SMP3861ACh0.20.0%0.0
PS1991ACh0.20.0%0.0
IB004_a1Glu0.20.0%0.0
CB12271Glu0.20.0%0.0
CL191_b1Glu0.20.0%0.0
CB22501Glu0.20.0%0.0
CB40721ACh0.20.0%0.0
CL0871ACh0.20.0%0.0
VES0021ACh0.20.0%0.0
DNpe0211ACh0.20.0%0.0
DNpe0021ACh0.20.0%0.0
DNp351ACh0.20.0%0.0
DNpe0421ACh0.20.0%0.0
DNp271ACh0.20.0%0.0
CB18441Glu0.20.0%0.0
CL1581ACh0.20.0%0.0
SMP1421unc0.20.0%0.0
AVLP1731ACh0.20.0%0.0
ICL013m_b1Glu0.20.0%0.0
SMP3971ACh0.20.0%0.0
CB30741ACh0.20.0%0.0
CB16491ACh0.20.0%0.0
LoVP951Glu0.20.0%0.0
SMP381_b1ACh0.20.0%0.0
PVLP1491ACh0.20.0%0.0
CL0111Glu0.20.0%0.0
CL1311ACh0.20.0%0.0
CB02061Glu0.20.0%0.0
CB36821ACh0.20.0%0.0
DNpe0261ACh0.20.0%0.0
CL2591ACh0.20.0%0.0
DNp361Glu0.20.0%0.0
CL3661GABA0.20.0%0.0