Male CNS – Cell Type Explorer

CB3909(L)

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
1,081
Total Synapses
Post: 734 | Pre: 347
log ratio : -1.08
1,081
Mean Synapses
Post: 734 | Pre: 347
log ratio : -1.08
ACh(94.8% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (10 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
AVLP(L)46963.9%-2.0411432.9%
CRE(L)567.6%1.3214040.3%
PVLP(L)9412.8%-2.85133.7%
gL(L)273.7%0.05288.1%
LAL(L)273.7%-0.05267.5%
SCL(L)324.4%-3.0041.2%
SMP(L)60.8%1.74205.8%
CentralBrain-unspecified91.2%-2.1720.6%
SLP(L)91.2%-inf00.0%
LH(L)50.7%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
CB3909
%
In
CV
PVLP206m (L)1ACh213.1%0.0
OA-VUMa8 (M)1OA203.0%0.0
AVLP471 (L)2Glu203.0%0.2
MBON20 (L)1GABA192.8%0.0
AVLP016 (L)1Glu172.5%0.0
CB3469 (L)1ACh152.2%0.0
LHAV7b1 (L)3ACh152.2%0.7
LAL076 (R)1Glu142.1%0.0
AVLP340 (L)1ACh142.1%0.0
CB3684 (L)2ACh121.8%0.3
CB3269 (L)2ACh121.8%0.0
CB1812 (R)2Glu121.8%0.0
LT82b (L)1ACh111.6%0.0
AVLP160 (L)1ACh101.5%0.0
AVLP724m (L)1ACh101.5%0.0
PVLP017 (L)1GABA101.5%0.0
AVLP728m (L)2ACh91.3%0.6
CRE005 (L)2ACh91.3%0.6
CB2341 (L)2ACh91.3%0.3
CRE005 (R)2ACh91.3%0.3
WED061 (L)2ACh91.3%0.1
MBON30 (L)1Glu81.2%0.0
CB4054 (R)1Glu81.2%0.0
AVLP728m (R)2ACh81.2%0.0
PLP059 (R)3ACh81.2%0.4
AVLP370_b (L)1ACh71.0%0.0
MBON05 (R)1Glu71.0%0.0
AVLP722m (L)3ACh71.0%0.5
CB3910 (L)2ACh71.0%0.1
aSP10C_a (L)4ACh71.0%0.5
AVLP053 (L)1ACh60.9%0.0
AVLP501 (L)1ACh60.9%0.0
SMP089 (L)2Glu60.9%0.7
AVLP299_c (L)2ACh60.9%0.7
AVLP264 (L)2ACh60.9%0.3
aSP10C_b (L)4ACh60.9%0.6
AVLP297 (L)3ACh60.9%0.4
mALD3 (R)1GABA50.7%0.0
AVLP296_b (L)1ACh50.7%0.0
AVLP494 (L)2ACh50.7%0.6
AVLP727m (R)2ACh50.7%0.2
AVLP490 (L)2GABA50.7%0.2
AVLP029 (L)1GABA40.6%0.0
SMP081 (R)1Glu40.6%0.0
vpoEN (L)1ACh40.6%0.0
CB2966 (R)1Glu40.6%0.0
SIP116m (L)2Glu40.6%0.5
AVLP300_b (L)2ACh40.6%0.5
PVLP012 (L)2ACh40.6%0.0
AVLP299_d (L)2ACh40.6%0.0
aSP10A_b (L)1ACh30.4%0.0
AVLP294 (L)1ACh30.4%0.0
AVLP381 (L)1ACh30.4%0.0
SMP570 (L)1ACh30.4%0.0
SIP103m (L)1Glu30.4%0.0
AVLP727m (L)1ACh30.4%0.0
SMP238 (L)1ACh30.4%0.0
PVLP070 (L)1ACh30.4%0.0
AVLP019 (L)1ACh30.4%0.0
AVLP751m (L)1ACh30.4%0.0
DNp62 (L)1unc30.4%0.0
DNpe052 (L)1ACh30.4%0.0
AVLP076 (L)1GABA30.4%0.0
OA-VPM3 (R)1OA30.4%0.0
mAL5A2 (R)2GABA30.4%0.3
SIP124m (L)2Glu30.4%0.3
CB4168 (L)2GABA30.4%0.3
CB2290 (L)2Glu30.4%0.3
AVLP496 (L)2ACh30.4%0.3
CB1852 (L)2ACh30.4%0.3
AVLP380 (L)2ACh30.4%0.3
PVLP025 (R)2GABA30.4%0.3
OA-VUMa1 (M)2OA30.4%0.3
AVLP244 (L)3ACh30.4%0.0
CB0930 (L)1ACh20.3%0.0
PVLP076 (L)1ACh20.3%0.0
aIPg_m2 (L)1ACh20.3%0.0
AVLP251 (L)1GABA20.3%0.0
AVLP017 (L)1Glu20.3%0.0
AVLP538 (L)1unc20.3%0.0
CRE039_a (L)1Glu20.3%0.0
AVLP734m (L)1GABA20.3%0.0
CB3507 (L)1ACh20.3%0.0
CB1478 (R)1Glu20.3%0.0
CB2328 (R)1Glu20.3%0.0
CB3233 (L)1ACh20.3%0.0
LHPV4d7 (L)1Glu20.3%0.0
CRE026 (R)1Glu20.3%0.0
CB2175 (R)1GABA20.3%0.0
CB1883 (L)1ACh20.3%0.0
AVLP298 (L)1ACh20.3%0.0
LAL117 (R)1ACh20.3%0.0
CB1883 (R)1ACh20.3%0.0
LHPV7c1 (L)1ACh20.3%0.0
AVLP722m (R)1ACh20.3%0.0
SMP385 (R)1unc20.3%0.0
LC31b (L)1ACh20.3%0.0
AVLP758m (L)1ACh20.3%0.0
PVLP016 (L)1Glu20.3%0.0
DNg104 (R)1unc20.3%0.0
SMP001 (L)1unc20.3%0.0
LHPV5e3 (L)1ACh20.3%0.0
AVLP733m (L)2ACh20.3%0.0
SMP106 (L)2Glu20.3%0.0
LH008m (L)2ACh20.3%0.0
aSP10B (L)2ACh20.3%0.0
LHPV2e1_a (L)2GABA20.3%0.0
LHPV2g1 (L)2ACh20.3%0.0
AVLP443 (L)1ACh10.1%0.0
CB0024 (L)1Glu10.1%0.0
CB1688 (L)1ACh10.1%0.0
SMP178 (L)1ACh10.1%0.0
AVLP476 (L)1DA10.1%0.0
AVLP062 (L)1Glu10.1%0.0
GNG289 (L)1ACh10.1%0.0
AVLP090 (L)1GABA10.1%0.0
CB0391 (L)1ACh10.1%0.0
PLP256 (L)1Glu10.1%0.0
AVLP031 (L)1GABA10.1%0.0
PPM1201 (L)1DA10.1%0.0
AVLP721m (L)1ACh10.1%0.0
CRE042 (L)1GABA10.1%0.0
SMP053 (L)1Glu10.1%0.0
SMP142 (L)1unc10.1%0.0
AVLP082 (L)1GABA10.1%0.0
SMP493 (L)1ACh10.1%0.0
VES092 (L)1GABA10.1%0.0
P1_10c (L)1ACh10.1%0.0
CB2404 (L)1ACh10.1%0.0
AVLP299_b (L)1ACh10.1%0.0
CB2769 (L)1ACh10.1%0.0
AVLP570 (L)1ACh10.1%0.0
AN08B032 (R)1ACh10.1%0.0
PVLP203m (L)1ACh10.1%0.0
AVLP300_a (L)1ACh10.1%0.0
DNc01 (R)1unc10.1%0.0
CRE006 (L)1Glu10.1%0.0
CRE200m (L)1Glu10.1%0.0
CRE038 (L)1Glu10.1%0.0
PAM05 (L)1DA10.1%0.0
CRE001 (L)1ACh10.1%0.0
CB2175 (L)1GABA10.1%0.0
LAL022 (L)1ACh10.1%0.0
aIPg1 (L)1ACh10.1%0.0
PVLP004 (L)1Glu10.1%0.0
CB3959 (L)1Glu10.1%0.0
SMP573 (L)1ACh10.1%0.0
CB2143 (R)1ACh10.1%0.0
aIPg7 (L)1ACh10.1%0.0
AVLP757m (L)1ACh10.1%0.0
SIP146m (R)1Glu10.1%0.0
LHAV2f2_b (L)1GABA10.1%0.0
SMP147 (L)1GABA10.1%0.0
PVLP008_b (L)1Glu10.1%0.0
CB3483 (R)1GABA10.1%0.0
M_lvPNm43 (L)1ACh10.1%0.0
AVLP527 (L)1ACh10.1%0.0
CB3549 (R)1GABA10.1%0.0
CB2026 (L)1Glu10.1%0.0
AVLP752m (L)1ACh10.1%0.0
AVLP742m (L)1ACh10.1%0.0
SIP115m (L)1Glu10.1%0.0
LHPD2c1 (L)1ACh10.1%0.0
AVLP060 (L)1Glu10.1%0.0
CB1544 (L)1GABA10.1%0.0
CRE200m (R)1Glu10.1%0.0
LAL155 (R)1ACh10.1%0.0
aIPg_m3 (L)1ACh10.1%0.0
AVLP748m (L)1ACh10.1%0.0
AVLP045 (L)1ACh10.1%0.0
AN09B017c (R)1Glu10.1%0.0
SMP384 (R)1unc10.1%0.0
AVLP577 (L)1ACh10.1%0.0
AVLP546 (L)1Glu10.1%0.0
AVLP746m (L)1ACh10.1%0.0
SMP028 (L)1Glu10.1%0.0
LHPV5e3 (R)1ACh10.1%0.0
SMP551 (L)1ACh10.1%0.0
PPL102 (R)1DA10.1%0.0
LAL045 (R)1GABA10.1%0.0
AVLP370_a (L)1ACh10.1%0.0
VES022 (L)1GABA10.1%0.0
AVLP160 (R)1ACh10.1%0.0
AVLP592 (L)1ACh10.1%0.0
PPL102 (L)1DA10.1%0.0
CRE041 (L)1GABA10.1%0.0
CRE107 (R)1Glu10.1%0.0
AVLP610 (R)1DA10.1%0.0
LHCENT9 (L)1GABA10.1%0.0
AVLP258 (L)1ACh10.1%0.0
AVLP732m (L)1ACh10.1%0.0
SLP130 (L)1ACh10.1%0.0
WED195 (R)1GABA10.1%0.0
DNp62 (R)1unc10.1%0.0
SLP031 (L)1ACh10.1%0.0
CRE075 (L)1Glu10.1%0.0
aIPg_m4 (L)1ACh10.1%0.0
GNG105 (R)1ACh10.1%0.0
LT87 (L)1ACh10.1%0.0
AVLP080 (L)1GABA10.1%0.0
LoVCLo3 (R)1OA10.1%0.0

Outputs

downstream
partner
#NTconns
CB3909
%
Out
CV
CRE041 (L)1GABA7310.9%0.0
SMP147 (L)1GABA324.8%0.0
MBON35 (L)1ACh243.6%0.0
PAM08 (L)9DA223.3%1.0
MBON20 (L)1GABA213.1%0.0
AVLP060 (L)3Glu182.7%0.5
ATL027 (L)1ACh152.2%0.0
AVLP069_b (L)2Glu142.1%0.3
CB3666 (L)2Glu131.9%0.1
SMP377 (L)5ACh131.9%0.4
AVLP478 (L)1GABA121.8%0.0
AVLP067 (L)1Glu111.6%0.0
LHPV5e3 (L)1ACh111.6%0.0
AVLP062 (L)2Glu111.6%0.3
LAL043_e (L)1GABA101.5%0.0
ATL025 (L)1ACh101.5%0.0
CRE044 (L)4GABA101.5%0.6
AVLP538 (L)1unc91.3%0.0
CRE013 (L)1GABA91.3%0.0
PPL102 (L)1DA91.3%0.0
CRE043_a1 (L)1GABA81.2%0.0
LHPV7c1 (L)1ACh71.0%0.0
PPL108 (R)1DA71.0%0.0
FB5A (L)2GABA71.0%0.7
CRE059 (L)2ACh71.0%0.1
SMP570 (L)2ACh71.0%0.1
PAM12 (L)4DA71.0%0.5
CB2342 (L)3Glu71.0%0.2
CB3606 (L)1Glu60.9%0.0
CRE043_c1 (L)1GABA60.9%0.0
SMP050 (L)1GABA60.9%0.0
CB2341 (L)2ACh60.9%0.7
CB3469 (L)1ACh50.7%0.0
LAL100 (L)1GABA50.7%0.0
CB3635 (L)2Glu50.7%0.6
FB4Y (L)25-HT50.7%0.6
FB5V_a (L)2Glu50.7%0.2
AVLP069_c (L)2Glu50.7%0.2
SMP709m (L)1ACh40.6%0.0
VES005 (L)1ACh40.6%0.0
CRE043_a2 (L)1GABA40.6%0.0
CRE043_a3 (L)1GABA40.6%0.0
PPL102 (R)1DA40.6%0.0
CL063 (L)1GABA40.6%0.0
AVLP024_a (L)1ACh30.4%0.0
ATL006 (L)1ACh30.4%0.0
LAL030_a (L)1ACh30.4%0.0
LAL043_d (L)1GABA30.4%0.0
CRE079 (L)1Glu30.4%0.0
CRE052 (L)1GABA30.4%0.0
SMP586 (L)1ACh30.4%0.0
LAL147_c (L)1Glu30.4%0.0
oviIN (L)1GABA30.4%0.0
AVLP294 (L)2ACh30.4%0.3
AVLP496 (L)2ACh30.4%0.3
CB3660 (L)2Glu30.4%0.3
SMP451 (L)1Glu20.3%0.0
CRE037 (R)1Glu20.3%0.0
AVLP020 (L)1Glu20.3%0.0
SMP163 (L)1GABA20.3%0.0
LAL129 (L)1ACh20.3%0.0
CRE080_c (L)1ACh20.3%0.0
PPM1201 (L)1DA20.3%0.0
CRE043_c2 (L)1GABA20.3%0.0
AVLP189_b (L)1ACh20.3%0.0
MBON30 (L)1Glu20.3%0.0
LHAV7b1 (L)1ACh20.3%0.0
AOTU021 (L)1GABA20.3%0.0
CRE095 (L)1ACh20.3%0.0
aSP10C_b (L)1ACh20.3%0.0
CRE085 (L)1ACh20.3%0.0
CRE086 (L)1ACh20.3%0.0
ICL010m (L)1ACh20.3%0.0
PAM01 (L)1DA20.3%0.0
aIPg7 (L)1ACh20.3%0.0
CB3910 (L)1ACh20.3%0.0
CRE027 (R)1Glu20.3%0.0
SMP052 (L)1ACh20.3%0.0
SMP116 (R)1Glu20.3%0.0
AVLP024_b (L)1ACh20.3%0.0
SMP015 (L)1ACh20.3%0.0
FB4C (L)1Glu20.3%0.0
SMP157 (L)1ACh20.3%0.0
SMP077 (L)1GABA20.3%0.0
MBON33 (L)1ACh20.3%0.0
CRE107 (L)1Glu20.3%0.0
MBON32 (L)1GABA20.3%0.0
AVLP258 (L)1ACh20.3%0.0
PAM05 (L)2DA20.3%0.0
AVLP753m (L)1ACh10.1%0.0
AVLP297 (L)1ACh10.1%0.0
AVLP053 (L)1ACh10.1%0.0
CB1795 (L)1ACh10.1%0.0
CRE012 (L)1GABA10.1%0.0
AVLP746m (L)1ACh10.1%0.0
AVLP295 (L)1ACh10.1%0.0
CRE042 (L)1GABA10.1%0.0
CRE074 (L)1Glu10.1%0.0
SMP589 (L)1unc10.1%0.0
SIP106m (L)1DA10.1%0.0
SMP142 (L)1unc10.1%0.0
SMP148 (L)1GABA10.1%0.0
LAL023 (L)1ACh10.1%0.0
SIP123m (L)1Glu10.1%0.0
CB3302 (L)1ACh10.1%0.0
CRE049 (L)1ACh10.1%0.0
P1_11b (L)1ACh10.1%0.0
LAL185 (L)1ACh10.1%0.0
CB2659 (L)1ACh10.1%0.0
SMP176 (L)1ACh10.1%0.0
CB3250 (L)1ACh10.1%0.0
AVLP494 (L)1ACh10.1%0.0
FB4E_b (L)1Glu10.1%0.0
LHAV2b4 (L)1ACh10.1%0.0
CRE043_d (L)1GABA10.1%0.0
CRE037 (L)1Glu10.1%0.0
AVLP027 (L)1ACh10.1%0.0
CRE039_a (R)1Glu10.1%0.0
LAL043_a (L)1unc10.1%0.0
SMP571 (L)1ACh10.1%0.0
SMP002 (L)1ACh10.1%0.0
FB5F (L)1Glu10.1%0.0
PLP059 (L)1ACh10.1%0.0
LAL043_c (L)1GABA10.1%0.0
AVLP462 (L)1GABA10.1%0.0
AVLP497 (L)1ACh10.1%0.0
SIP146m (R)1Glu10.1%0.0
PLP208 (L)1ACh10.1%0.0
LCNOp (L)1Glu10.1%0.0
SIP145m (L)1Glu10.1%0.0
LAL008 (L)1Glu10.1%0.0
SMP446 (L)1Glu10.1%0.0
IB024 (L)1ACh10.1%0.0
CRE028 (R)1Glu10.1%0.0
SMP458 (L)1ACh10.1%0.0
CRE043_b (L)1GABA10.1%0.0
LAL076 (R)1Glu10.1%0.0
aIPg_m3 (L)1ACh10.1%0.0
CRE045 (L)1GABA10.1%0.0
CRE005 (L)1ACh10.1%0.0
ATL026 (L)1ACh10.1%0.0
LAL300m (L)1ACh10.1%0.0
LAL175 (L)1ACh10.1%0.0
aIPg5 (L)1ACh10.1%0.0
AVLP108 (L)1ACh10.1%0.0
ATL017 (L)1Glu10.1%0.0
SLP032 (L)1ACh10.1%0.0
FB4G (L)1Glu10.1%0.0
AVLP714m (L)1ACh10.1%0.0
PPL108 (L)1DA10.1%0.0
AVLP725m (L)1ACh10.1%0.0
LAL101 (L)1GABA10.1%0.0
AVLP244 (L)1ACh10.1%0.0
AVLP471 (L)1Glu10.1%0.0
SMP028 (L)1Glu10.1%0.0
AVLP344 (L)1ACh10.1%0.0
SMP551 (L)1ACh10.1%0.0
AVLP716m (L)1ACh10.1%0.0
AVLP201 (L)1GABA10.1%0.0
DNg104 (R)1unc10.1%0.0
LT82b (L)1ACh10.1%0.0
AVLP610 (R)1DA10.1%0.0
LHCENT3 (L)1GABA10.1%0.0
AVLP732m (L)1ACh10.1%0.0
CRE021 (L)1GABA10.1%0.0
DNp62 (L)1unc10.1%0.0
SMP177 (L)1ACh10.1%0.0
CRE075 (L)1Glu10.1%0.0
CRE004 (L)1ACh10.1%0.0
CRE011 (L)1ACh10.1%0.0
CRE023 (L)1Glu10.1%0.0
OA-VUMa8 (M)1OA10.1%0.0
AOTU019 (L)1GABA10.1%0.0
SMP108 (L)1ACh10.1%0.0