Male CNS – Cell Type Explorer

CB3791(R)

3
Total Neurons
Right: 1 | Left: 2
log ratio : 1.00
2,077
Total Synapses
Post: 1,736 | Pre: 341
log ratio : -2.35
2,077
Mean Synapses
Post: 1,736 | Pre: 341
log ratio : -2.35
ACh(81.4% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (5 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
SLP(R)1,58791.4%-2.2832795.9%
SCL(R)965.5%-3.5882.3%
LH(R)321.8%-inf00.0%
CentralBrain-unspecified181.0%-inf00.0%
SIP(R)30.2%1.0061.8%

Connectivity

Inputs

upstream
partner
#NTconns
CB3791
%
In
CV
SLP015_c (R)3Glu644.0%0.4
LoVP68 (R)1ACh603.7%0.0
SLP447 (R)1Glu462.8%0.0
SLP269 (R)1ACh452.8%0.0
CB3049 (R)3ACh422.6%0.0
CL126 (R)1Glu412.5%0.0
CB1570 (R)5ACh402.5%0.8
SLP383 (R)1Glu322.0%0.0
SLP373 (R)1unc311.9%0.0
CB2467 (R)3ACh301.9%0.2
SLP007 (R)2Glu291.8%0.5
LHPV6a3 (R)3ACh291.8%0.6
SLP341_b (R)1ACh281.7%0.0
LHCENT10 (R)2GABA281.7%0.0
SLP006 (R)1Glu251.5%0.0
SLP027 (R)2Glu221.4%0.8
CL028 (R)1GABA211.3%0.0
SLP321 (R)2ACh201.2%0.2
SLP467 (R)3ACh191.2%0.6
SLP038 (R)3ACh191.2%0.3
SAD082 (R)1ACh181.1%0.0
LHPV4c2 (R)2Glu181.1%0.3
SAD082 (L)1ACh171.1%0.0
LHAV3m1 (R)1GABA161.0%0.0
PPL201 (R)1DA161.0%0.0
CB1981 (R)2Glu161.0%0.5
CB2224 (R)3ACh161.0%0.8
SLP160 (R)3ACh161.0%0.7
SLP033 (R)1ACh150.9%0.0
SLP082 (R)4Glu150.9%0.7
CB2032 (R)1ACh140.9%0.0
LHAV3a1_b (R)2ACh120.7%0.3
CL026 (R)1Glu110.7%0.0
LHPV5b3 (R)4ACh110.7%0.4
SLP471 (R)1ACh100.6%0.0
CL272_b3 (R)1ACh100.6%0.0
SLP210 (R)1ACh100.6%0.0
SLP136 (R)1Glu100.6%0.0
SLP034 (R)1ACh100.6%0.0
SLP403 (L)2unc100.6%0.8
SLP002 (R)3GABA100.6%0.5
SLP217 (L)3Glu100.6%0.3
CB4130 (R)3Glu100.6%0.3
LoVP4 (R)4ACh100.6%0.4
LHAV4d1 (R)5unc100.6%0.4
SLP025 (R)1Glu90.6%0.0
SLP101 (R)1Glu90.6%0.0
CB1752 (R)2ACh90.6%0.8
CL272_a2 (R)1ACh80.5%0.0
SLP341_a (R)1ACh80.5%0.0
SLP069 (R)1Glu80.5%0.0
CB3236 (R)2Glu80.5%0.5
CB3218 (R)2ACh80.5%0.5
SLP062 (R)2GABA80.5%0.5
CB2208 (R)3ACh80.5%0.4
CB1201 (R)4ACh80.5%0.6
SLP289 (R)1Glu70.4%0.0
CL250 (R)1ACh70.4%0.0
LHAV3a1_c (R)1ACh70.4%0.0
SLP208 (R)1GABA70.4%0.0
SLP471 (L)1ACh70.4%0.0
LHAV3e1 (R)2ACh70.4%0.7
CB4120 (R)2Glu70.4%0.4
CB1333 (R)2ACh70.4%0.4
LHAV3n1 (R)2ACh70.4%0.4
SLP028 (R)2Glu70.4%0.4
SLP217 (R)1Glu60.4%0.0
SLP315 (R)1Glu60.4%0.0
SLP171 (R)1Glu60.4%0.0
SLP206 (R)1GABA60.4%0.0
CB4129 (R)2Glu60.4%0.7
CB1821 (R)2GABA60.4%0.3
SLP040 (R)2ACh60.4%0.0
SLP457 (R)2unc60.4%0.0
CB3175 (R)1Glu50.3%0.0
SLP122 (R)1ACh50.3%0.0
LHCENT13_d (R)1GABA50.3%0.0
CB3664 (R)1ACh50.3%0.0
LHAV6b4 (R)1ACh50.3%0.0
SLP376 (R)1Glu50.3%0.0
CL317 (R)1Glu50.3%0.0
PLP086 (R)2GABA50.3%0.2
SMP086 (R)1Glu40.2%0.0
SLP314 (R)1Glu40.2%0.0
CL291 (R)1ACh40.2%0.0
CB1309 (R)1Glu40.2%0.0
SLP305 (R)1ACh40.2%0.0
LHAV2o1 (R)1ACh40.2%0.0
SLP381 (R)1Glu40.2%0.0
LHAV1e1 (R)1GABA40.2%0.0
CL070_b (R)1ACh40.2%0.0
AVLP574 (R)1ACh40.2%0.0
LHAV3h1 (R)1ACh40.2%0.0
LHAV7a7 (R)2Glu40.2%0.5
SLP179_b (R)2Glu40.2%0.5
SLP438 (R)2unc40.2%0.5
CB1389 (R)2ACh40.2%0.0
LHPV4c3 (R)2Glu40.2%0.0
LoVP5 (R)2ACh40.2%0.0
LHAV6a1 (R)2ACh40.2%0.0
SLP176 (R)3Glu40.2%0.4
SMP076 (R)1GABA30.2%0.0
SMP096 (L)1Glu30.2%0.0
LHAV6a4 (R)1ACh30.2%0.0
SMP413 (R)1ACh30.2%0.0
CB3697 (R)1ACh30.2%0.0
SLP137 (R)1Glu30.2%0.0
CB1246 (R)1GABA30.2%0.0
CB3556 (R)1ACh30.2%0.0
LHPV4d3 (R)1Glu30.2%0.0
CB2495 (R)1unc30.2%0.0
CB1811 (R)1ACh30.2%0.0
LHAV3e4_a (R)1ACh30.2%0.0
LHCENT13_a (R)1GABA30.2%0.0
SLP222 (R)1ACh30.2%0.0
AVLP042 (R)1ACh30.2%0.0
SMP340 (R)1ACh30.2%0.0
CB1178 (R)1Glu30.2%0.0
LoVP71 (R)1ACh30.2%0.0
LHPV2h1 (R)1ACh30.2%0.0
SLP221 (R)1ACh30.2%0.0
AVLP173 (R)1ACh30.2%0.0
LHAV2k6 (R)1ACh30.2%0.0
AVLP024_a (R)1ACh30.2%0.0
PPL203 (R)1unc30.2%0.0
LHAV3k5 (R)1Glu30.2%0.0
5-HTPMPV01 (L)15-HT30.2%0.0
AVLP035 (L)1ACh30.2%0.0
MeVP25 (R)1ACh30.2%0.0
CL256 (R)1ACh30.2%0.0
CB1212 (R)2Glu30.2%0.3
CB4087 (R)2ACh30.2%0.3
SLP104 (R)2Glu30.2%0.3
PLP089 (R)2GABA30.2%0.3
AVLP060 (R)2Glu30.2%0.3
SLP188 (R)1Glu20.1%0.0
SMP503 (R)1unc20.1%0.0
ANXXX434 (R)1ACh20.1%0.0
SLP395 (R)1Glu20.1%0.0
CB1059 (R)1Glu20.1%0.0
SLP109 (R)1Glu20.1%0.0
CB1846 (R)1Glu20.1%0.0
SLP402_a (R)1Glu20.1%0.0
LHAV7a4 (R)1Glu20.1%0.0
SLP290 (R)1Glu20.1%0.0
SLP026 (R)1Glu20.1%0.0
PLP175 (R)1ACh20.1%0.0
CB2701 (R)1ACh20.1%0.0
SLP024 (R)1Glu20.1%0.0
CB1838 (R)1GABA20.1%0.0
CB2983 (R)1GABA20.1%0.0
CL272_a1 (R)1ACh20.1%0.0
CL028 (L)1GABA20.1%0.0
CB1576 (L)1Glu20.1%0.0
LHPV4a10 (R)1Glu20.1%0.0
CB4158 (R)1ACh20.1%0.0
CB3288 (R)1Glu20.1%0.0
AVLP067 (L)1Glu20.1%0.0
LHCENT13_b (R)1GABA20.1%0.0
SLP153 (R)1ACh20.1%0.0
LHAV6i2_b (R)1ACh20.1%0.0
LoVP57 (R)1ACh20.1%0.0
SMP105_b (R)1Glu20.1%0.0
SMP084 (R)1Glu20.1%0.0
SLP155 (R)1ACh20.1%0.0
SLP444 (R)1unc20.1%0.0
LHAV2n1 (R)1GABA20.1%0.0
AVLP212 (R)1ACh20.1%0.0
SLP244 (R)1ACh20.1%0.0
SLP458 (R)1Glu20.1%0.0
AN09B033 (L)1ACh20.1%0.0
CL317 (L)1Glu20.1%0.0
SMP503 (L)1unc20.1%0.0
AVLP343 (R)1Glu20.1%0.0
CL027 (R)1GABA20.1%0.0
AVLP266 (L)1ACh20.1%0.0
AVLP571 (R)1ACh20.1%0.0
LHCENT1 (R)1GABA20.1%0.0
CL071_b (R)1ACh20.1%0.0
LHCENT6 (R)1GABA20.1%0.0
SLP131 (R)1ACh20.1%0.0
AVLP434_a (R)1ACh20.1%0.0
OA-VUMa3 (M)1OA20.1%0.0
AstA1 (L)1GABA20.1%0.0
SLP008 (R)2Glu20.1%0.0
CB1154 (R)2Glu20.1%0.0
SLP089 (R)2Glu20.1%0.0
CB2292 (R)2unc20.1%0.0
SLP044_d (R)2ACh20.1%0.0
SLP311 (R)2Glu20.1%0.0
SLP304 (R)2unc20.1%0.0
LHAV3g2 (R)1ACh10.1%0.0
SLP440 (R)1ACh10.1%0.0
CL357 (L)1unc10.1%0.0
SLP392 (R)1ACh10.1%0.0
SMP084 (L)1Glu10.1%0.0
SMP096 (R)1Glu10.1%0.0
SLP300 (R)1Glu10.1%0.0
SLP240_b (R)1ACh10.1%0.0
SLP246 (R)1ACh10.1%0.0
CB3340 (L)1ACh10.1%0.0
LHPV5c3 (R)1ACh10.1%0.0
CB3043 (R)1ACh10.1%0.0
SMP106 (R)1Glu10.1%0.0
LHPV5b2 (R)1ACh10.1%0.0
SMP105_b (L)1Glu10.1%0.0
CB1392 (R)1Glu10.1%0.0
SLP086 (R)1Glu10.1%0.0
CB1365 (R)1Glu10.1%0.0
CB1073 (R)1ACh10.1%0.0
LHAD1f4 (R)1Glu10.1%0.0
CB3081 (R)1ACh10.1%0.0
CB1923 (R)1ACh10.1%0.0
LHPV4i3 (R)1Glu10.1%0.0
CB1179 (R)1Glu10.1%0.0
SMP360 (R)1ACh10.1%0.0
CB1931 (R)1Glu10.1%0.0
SLP288 (R)1Glu10.1%0.0
SLP198 (R)1Glu10.1%0.0
LHAV5a8 (R)1ACh10.1%0.0
CB1759b (R)1ACh10.1%0.0
CB4139 (R)1ACh10.1%0.0
CB4119 (R)1Glu10.1%0.0
CB1352 (R)1Glu10.1%0.0
CB3005 (R)1Glu10.1%0.0
LHAV5a6_a (R)1ACh10.1%0.0
SLP017 (R)1Glu10.1%0.0
SLP405_c (R)1ACh10.1%0.0
LHAV5a1 (R)1ACh10.1%0.0
SMP341 (R)1ACh10.1%0.0
LHAV4g1 (R)1GABA10.1%0.0
AVLP227 (R)1ACh10.1%0.0
LoVP14 (R)1ACh10.1%0.0
SMP703m (L)1Glu10.1%0.0
LHAV4b4 (R)1GABA10.1%0.0
SMP414 (R)1ACh10.1%0.0
SLP120 (R)1ACh10.1%0.0
LHCENT13_c (R)1GABA10.1%0.0
CB1901 (R)1ACh10.1%0.0
CB1103 (R)1ACh10.1%0.0
LHAV5a4_a (R)1ACh10.1%0.0
CB0972 (R)1ACh10.1%0.0
SLP158 (R)1ACh10.1%0.0
CB2285 (R)1ACh10.1%0.0
LHAD1f1 (R)1Glu10.1%0.0
SLP466 (R)1ACh10.1%0.0
CB4128 (R)1unc10.1%0.0
SLP405_c (L)1ACh10.1%0.0
SLP465 (R)1ACh10.1%0.0
SLP094_a (R)1ACh10.1%0.0
SLP363 (R)1Glu10.1%0.0
CL364 (R)1Glu10.1%0.0
CL269 (R)1ACh10.1%0.0
PLP053 (R)1ACh10.1%0.0
SLP202 (R)1Glu10.1%0.0
LoVP70 (R)1ACh10.1%0.0
LHPV4e1 (R)1Glu10.1%0.0
LHAV3k6 (R)1ACh10.1%0.0
SLP068 (R)1Glu10.1%0.0
LHPV6j1 (R)1ACh10.1%0.0
CB3977 (R)1ACh10.1%0.0
CRZ01 (R)1unc10.1%0.0
SMP495_a (R)1Glu10.1%0.0
SLP380 (R)1Glu10.1%0.0
LoVP59 (R)1ACh10.1%0.0
SLP379 (R)1Glu10.1%0.0
CL071_a (R)1ACh10.1%0.0
AVLP574 (L)1ACh10.1%0.0
LT67 (R)1ACh10.1%0.0
AVLP475_a (L)1Glu10.1%0.0
PPM1201 (R)1DA10.1%0.0
LoVCLo2 (R)1unc10.1%0.0
PLP131 (R)1GABA10.1%0.0
SLP031 (R)1ACh10.1%0.0
SLP003 (R)1GABA10.1%0.0

Outputs

downstream
partner
#NTconns
CB3791
%
Out
CV
PPL201 (R)1DA678.3%0.0
CB3043 (R)3ACh536.6%0.4
SLP101 (R)2Glu455.6%0.4
SLP171 (R)3Glu404.9%0.4
LHCENT6 (R)1GABA374.6%0.0
SLP376 (R)1Glu313.8%0.0
SLP388 (R)1ACh273.3%0.0
SLP024 (R)2Glu273.3%0.9
LHCENT1 (R)1GABA263.2%0.0
SLP015_c (R)3Glu263.2%0.4
SLP441 (R)1ACh243.0%0.0
SLP312 (R)2Glu243.0%0.1
SLP392 (R)1ACh202.5%0.0
SLP179_b (R)6Glu192.3%0.6
LHAV3m1 (R)1GABA182.2%0.0
CB1309 (R)1Glu162.0%0.0
SLP094_c (R)1ACh151.9%0.0
LHAV1e1 (R)1GABA131.6%0.0
LHPV4d3 (R)2Glu111.4%0.6
CB4110 (R)2ACh111.4%0.5
SLP179_a (R)3Glu91.1%0.9
SLP025 (R)1Glu70.9%0.0
SLP314 (R)1Glu60.7%0.0
SMP096 (L)2Glu60.7%0.3
CB3697 (R)2ACh60.7%0.0
SLP464 (R)2ACh60.7%0.0
CB1179 (R)1Glu50.6%0.0
SLP289 (R)1Glu50.6%0.0
CB2479 (R)2ACh50.6%0.6
CB4120 (R)2Glu50.6%0.6
SLP041 (R)2ACh50.6%0.6
CB1089 (R)2ACh50.6%0.2
CB0943 (R)2ACh50.6%0.2
PAM04 (R)3DA50.6%0.3
SLP105 (R)1Glu40.5%0.0
LHAV7a4 (R)1Glu40.5%0.0
CB1595 (R)1ACh40.5%0.0
SMP025 (R)1Glu40.5%0.0
CB1104 (R)1ACh40.5%0.0
CB3664 (R)1ACh40.5%0.0
GNG485 (R)1Glu40.5%0.0
LHCENT9 (R)1GABA40.5%0.0
SLP240_b (R)2ACh40.5%0.5
CB1050 (R)1ACh30.4%0.0
SLP470 (L)1ACh30.4%0.0
CB3498 (R)1ACh30.4%0.0
FB8F_a (R)1Glu30.4%0.0
CB2105 (R)1ACh30.4%0.0
CB1931 (R)1Glu30.4%0.0
SLP394 (R)1ACh30.4%0.0
SMP341 (R)1ACh30.4%0.0
SMP246 (R)1ACh30.4%0.0
SLP160 (R)1ACh30.4%0.0
CB2285 (R)1ACh30.4%0.0
SLP071 (R)1Glu30.4%0.0
LHAV2o1 (R)1ACh30.4%0.0
LHAV3k5 (R)1Glu30.4%0.0
SLP176 (R)2Glu30.4%0.3
SLP042 (R)1ACh20.2%0.0
SLP440 (R)1ACh20.2%0.0
SMP096 (R)1Glu20.2%0.0
LHPV5c1_c (R)1ACh20.2%0.0
CB3519 (R)1ACh20.2%0.0
CB3477 (R)1Glu20.2%0.0
CB4100 (R)1ACh20.2%0.0
CB3060 (R)1ACh20.2%0.0
SLP038 (R)1ACh20.2%0.0
CB1626 (R)1unc20.2%0.0
LHAV5a8 (R)1ACh20.2%0.0
CB1073 (R)1ACh20.2%0.0
SMP250 (R)1Glu20.2%0.0
SLP473 (R)1ACh20.2%0.0
LHCENT10 (R)1GABA20.2%0.0
SLP056 (R)1GABA20.2%0.0
FB7F (R)2Glu20.2%0.0
SIP076 (R)1ACh10.1%0.0
SMP084 (L)1Glu10.1%0.0
mAL4F (L)1Glu10.1%0.0
SMP279_a (R)1Glu10.1%0.0
CB2988 (R)1Glu10.1%0.0
LHPV6a9_b (R)1ACh10.1%0.0
SMP086 (R)1Glu10.1%0.0
CB3055 (R)1ACh10.1%0.0
SMP357 (R)1ACh10.1%0.0
LHAD1f4 (R)1Glu10.1%0.0
CB2992 (R)1Glu10.1%0.0
CB4122 (R)1Glu10.1%0.0
SLP044_d (R)1ACh10.1%0.0
SLP199 (R)1Glu10.1%0.0
CB3293 (R)1ACh10.1%0.0
SLP216 (R)1GABA10.1%0.0
CB2292 (R)1unc10.1%0.0
CB1212 (R)1Glu10.1%0.0
LHPV4c2 (R)1Glu10.1%0.0
SMP275 (R)1Glu10.1%0.0
SLP252_a (R)1Glu10.1%0.0
LHAV5a6_a (R)1ACh10.1%0.0
LHAV3b8 (R)1ACh10.1%0.0
LHPV4c3 (R)1Glu10.1%0.0
CB1593 (R)1Glu10.1%0.0
SLP040 (R)1ACh10.1%0.0
SLP315 (R)1Glu10.1%0.0
SLP313 (R)1Glu10.1%0.0
CB3288 (R)1Glu10.1%0.0
CB2983 (R)1GABA10.1%0.0
CB3168 (R)1Glu10.1%0.0
SLP043 (R)1ACh10.1%0.0
LHPV6a3 (R)1ACh10.1%0.0
SLP283,SLP284 (R)1Glu10.1%0.0
SLP120 (R)1ACh10.1%0.0
CB1901 (R)1ACh10.1%0.0
CL090_c (R)1ACh10.1%0.0
CB4158 (R)1ACh10.1%0.0
SLP162 (R)1ACh10.1%0.0
SMP026 (L)1ACh10.1%0.0
PLP181 (R)1Glu10.1%0.0
SLP027 (R)1Glu10.1%0.0
SLP157 (R)1ACh10.1%0.0
LHAD1f1 (R)1Glu10.1%0.0
SLP405_c (L)1ACh10.1%0.0
SLP158 (R)1ACh10.1%0.0
PAM10 (R)1DA10.1%0.0
SLP149 (R)1ACh10.1%0.0
SMP245 (R)1ACh10.1%0.0
CB3464 (R)1Glu10.1%0.0
SLP252_b (R)1Glu10.1%0.0
SLP210 (R)1ACh10.1%0.0
SLP062 (R)1GABA10.1%0.0
SLP368 (R)1ACh10.1%0.0
LHAV4l1 (R)1GABA10.1%0.0
SMP255 (R)1ACh10.1%0.0
SLP390 (R)1ACh10.1%0.0
SLP080 (R)1ACh10.1%0.0
SLP457 (R)1unc10.1%0.0
SMP503 (L)1unc10.1%0.0
PRW003 (R)1Glu10.1%0.0
CL071_b (R)1ACh10.1%0.0
GNG670 (R)1Glu10.1%0.0
LHCENT2 (R)1GABA10.1%0.0