Male CNS – Cell Type Explorer

CB3760(R)

3
Total Neurons
Right: 1 | Left: 2
log ratio : 1.00
677
Total Synapses
Post: 578 | Pre: 99
log ratio : -2.55
677
Mean Synapses
Post: 578 | Pre: 99
log ratio : -2.55
Glu(83.3% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (5 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
PLP(R)33457.8%-3.632727.3%
WED(R)19032.9%-2.024747.5%
LAL(R)223.8%-0.072121.2%
CentralBrain-unspecified295.0%-3.2733.0%
Optic-unspecified(R)30.5%-1.5811.0%

Connectivity

Inputs

upstream
partner
#NTconns
CB3760
%
In
CV
LAL048 (R)5GABA6211.8%0.6
PLP026 (R)4GABA397.4%0.4
ALIN2 (R)1ACh326.1%0.0
CB3759 (R)4Glu275.1%0.5
WEDPN17_a2 (R)2ACh244.6%0.4
LAL047 (R)1GABA234.4%0.0
CB3113 (L)1ACh234.4%0.0
WEDPN14 (R)3ACh214.0%0.1
WED194 (R)1GABA203.8%0.0
CB4200 (L)1ACh193.6%0.0
WEDPN16_d (R)3ACh183.4%0.8
PS258 (L)1ACh152.8%0.0
WEDPN9 (R)1ACh152.8%0.0
M_lv2PN9t49_b (R)1GABA142.7%0.0
M_lv2PN9t49_a (R)1GABA132.5%0.0
PLP221 (R)1ACh122.3%0.0
CB2873 (R)3Glu122.3%0.4
WED143_c (R)1ACh81.5%0.0
WEDPN8C (R)3ACh81.5%0.6
WED034 (R)3Glu81.5%0.2
WED181 (R)1ACh71.3%0.0
PLP039 (R)2Glu71.3%0.1
CB2881 (R)2Glu61.1%0.7
SMP371_b (R)1Glu50.9%0.0
WED157 (R)2ACh50.9%0.2
WED152 (R)1ACh40.8%0.0
PLP043 (R)1Glu40.8%0.0
CB2227 (R)1ACh40.8%0.0
PPM1202 (R)2DA40.8%0.5
CB1268 (R)2ACh40.8%0.5
AN19B019 (L)1ACh30.6%0.0
WED143_c (L)1ACh30.6%0.0
CB0221 (L)1ACh30.6%0.0
SAD003 (R)1ACh30.6%0.0
CB3453 (R)1GABA30.6%0.0
WED089 (L)1ACh30.6%0.0
WEDPN17_a1 (R)2ACh30.6%0.3
CB4112 (R)2Glu30.6%0.3
CB1213 (R)2ACh30.6%0.3
PLP042_b (R)3Glu30.6%0.0
WED093 (L)1ACh20.4%0.0
CB1564 (R)1ACh20.4%0.0
WED143_d (L)1ACh20.4%0.0
CB1055 (R)1GABA20.4%0.0
SMP183 (R)1ACh20.4%0.0
LAL189 (L)2ACh20.4%0.0
LAL060_a (R)1GABA10.2%0.0
CL234 (R)1Glu10.2%0.0
SMP145 (R)1unc10.2%0.0
SMP371_a (L)1Glu10.2%0.0
LHPV5g1_a (R)1ACh10.2%0.0
CB1407 (R)1ACh10.2%0.0
CB2206 (L)1ACh10.2%0.0
PS268 (R)1ACh10.2%0.0
WED097 (R)1Glu10.2%0.0
PLP042_c (R)1unc10.2%0.0
PLP041 (R)1Glu10.2%0.0
PLP044 (R)1Glu10.2%0.0
WED037 (R)1Glu10.2%0.0
CB1504 (R)1Glu10.2%0.0
PLP028 (R)1unc10.2%0.0
WED020_b (R)1ACh10.2%0.0
WED035 (R)1Glu10.2%0.0
WED079 (R)1GABA10.2%0.0
WED016 (R)1ACh10.2%0.0
CL130 (R)1ACh10.2%0.0
WEDPN12 (L)1Glu10.2%0.0
LAL138 (R)1GABA10.2%0.0

Outputs

downstream
partner
#NTconns
CB3760
%
Out
CV
LAL182 (R)1ACh196.5%0.0
LAL060_b (R)3GABA186.2%0.2
PLP042_a (R)3Glu175.8%0.2
LAL047 (R)1GABA165.5%0.0
WED198 (R)1GABA144.8%0.0
PLP039 (R)3Glu113.8%0.8
PLP042_b (R)2Glu113.8%0.5
CB3453 (R)1GABA82.7%0.0
DNp38 (R)1ACh82.7%0.0
WED028 (R)1GABA72.4%0.0
M_lv2PN9t49_b (R)1GABA72.4%0.0
WED002 (R)1ACh72.4%0.0
WED199 (R)1GABA72.4%0.0
LAL114 (R)1ACh72.4%0.0
PLP232 (R)1ACh72.4%0.0
PLP216 (R)1GABA72.4%0.0
CB2873 (R)3Glu72.4%0.4
CB3759 (R)4Glu72.4%0.5
WEDPN10B (L)1GABA62.1%0.0
WEDPN10A (L)1GABA62.1%0.0
WEDPN7B (R)3ACh62.1%0.0
PLP159 (R)2GABA51.7%0.2
WED122 (R)1GABA41.4%0.0
WED034 (R)2Glu41.4%0.0
WED184 (R)1GABA31.0%0.0
WED197 (R)1GABA31.0%0.0
PLP042_c (R)1unc31.0%0.0
WEDPN16_d (R)1ACh31.0%0.0
WEDPN8C (R)1ACh31.0%0.0
SMP371_a (R)1Glu20.7%0.0
SMP490 (R)1ACh20.7%0.0
CB1407 (R)1ACh20.7%0.0
CB1705 (R)1GABA20.7%0.0
WED085 (R)1GABA20.7%0.0
AVLP487 (R)1GABA20.7%0.0
LAL061 (R)1GABA20.7%0.0
WED020_b (R)1ACh20.7%0.0
ALIN2 (R)1ACh20.7%0.0
CB1055 (R)1GABA20.7%0.0
CL234 (R)1Glu20.7%0.0
LAL156_b (R)1ACh20.7%0.0
FB4B (R)1Glu20.7%0.0
SMP370 (L)1Glu20.7%0.0
LHCENT10 (R)1GABA20.7%0.0
WED031 (R)1GABA10.3%0.0
PFL1 (L)1ACh10.3%0.0
SMP371_b (R)1Glu10.3%0.0
SMP371_a (L)1Glu10.3%0.0
LHPD2a6 (R)1Glu10.3%0.0
WED145 (R)1ACh10.3%0.0
CB1148 (R)1Glu10.3%0.0
CB3056 (R)1Glu10.3%0.0
PLP048 (R)1Glu10.3%0.0
LAL188_b (R)1ACh10.3%0.0
WEDPN7A (R)1ACh10.3%0.0
CL091 (R)1ACh10.3%0.0
WED039 (R)1Glu10.3%0.0
WEDPN17_c (R)1ACh10.3%0.0
PLP171 (R)1GABA10.3%0.0
WEDPN7C (R)1ACh10.3%0.0
WED057 (R)1GABA10.3%0.0
LAL060_a (R)1GABA10.3%0.0
SMP242 (R)1ACh10.3%0.0
WED093 (R)1ACh10.3%0.0
WED079 (R)1GABA10.3%0.0
PPM1202 (R)1DA10.3%0.0
FB2D (R)1Glu10.3%0.0
WEDPN5 (R)1GABA10.3%0.0
SMP183 (R)1ACh10.3%0.0
ATL030 (R)1Glu10.3%0.0
FB1G (R)1ACh10.3%0.0
WED006 (R)1GABA10.3%0.0
LHPV6q1 (R)1unc10.3%0.0
LT36 (L)1GABA10.3%0.0