Male CNS – Cell Type Explorer

CB3729(R)

5
Total Neurons
Right: 2 | Left: 3
log ratio : 0.58
1,327
Total Synapses
Post: 985 | Pre: 342
log ratio : -1.53
663.5
Mean Synapses
Post: 492.5 | Pre: 171
log ratio : -1.53
unc(43.4% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (3 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
LH(R)74875.9%-1.5325975.7%
SLP(R)17818.1%-1.237622.2%
CentralBrain-unspecified596.0%-3.0872.0%

Connectivity

Inputs

upstream
partner
#NTconns
CB3729
%
In
CV
LHAV4b2 (R)5GABA48.511.0%0.6
LHAV4e2_b1 (R)3GABA39.59.0%0.1
LHAV3e3_b (R)1ACh265.9%0.0
DA1_lPN (R)2ACh23.55.3%1.0
LHAV4e7_b (R)2Glu163.6%0.4
DL3_lPN (R)6ACh153.4%0.5
LHAV2b10 (R)3ACh122.7%0.5
LHAV2a3 (R)3ACh11.52.6%0.9
CB1804 (R)1ACh102.3%0.0
VA5_lPN (R)3ACh7.51.7%0.4
CB3869 (R)1ACh71.6%0.0
LHAD1d1 (R)4ACh71.6%0.6
CB3016 (R)3GABA6.51.5%0.5
CB2802 (R)1ACh61.4%0.0
LHAD3b1_a (R)1ACh61.4%0.0
CB3729 (R)2unc61.4%0.2
CB0227 (R)1ACh5.51.2%0.0
LHAV3i1 (R)1ACh5.51.2%0.0
LHAV4e2_b2 (R)3Glu5.51.2%0.7
LHPV1c1 (R)2ACh5.51.2%0.5
LHPV4b4 (R)4Glu51.1%0.6
M_lvPNm45 (R)1ACh4.51.0%0.0
LHPV12a1 (L)1GABA4.51.0%0.0
CB0367 (R)1Glu40.9%0.0
CB1626 (R)1unc40.9%0.0
CB1359 (R)4Glu40.9%0.9
AVLP471 (R)2Glu40.9%0.0
LHAV4d1 (R)5unc40.9%0.5
LHPV5e2 (R)1ACh3.50.8%0.0
CB2904 (R)2Glu3.50.8%0.7
CB3293 (R)3ACh3.50.8%0.8
LHCENT9 (R)1GABA30.7%0.0
CSD (L)15-HT30.7%0.0
OA-VPM4 (L)1OA30.7%0.0
LHAV2c1 (R)3ACh30.7%0.7
mAL4I (L)2Glu30.7%0.0
SLP122 (R)2ACh30.7%0.3
CB2596 (R)2ACh30.7%0.0
DA3_adPN (R)2ACh2.50.6%0.6
VA1d_vPN (R)1GABA2.50.6%0.0
LHAV4a4 (R)5GABA2.50.6%0.0
CB3318 (R)1ACh20.5%0.0
LHAD1b3 (R)1ACh20.5%0.0
CB2321 (R)1ACh20.5%0.0
LHAD1b4 (R)2ACh20.5%0.5
LHCENT1 (R)1GABA20.5%0.0
CB1201 (R)2ACh20.5%0.5
DC3_adPN (R)2ACh20.5%0.5
LHPV4b9 (R)1Glu1.50.3%0.0
LHAV3g2 (R)1ACh1.50.3%0.0
PVLP009 (R)1ACh1.50.3%0.0
CB4132 (R)1ACh1.50.3%0.0
CB2805 (R)1ACh1.50.3%0.0
LHPV4i4 (R)1Glu1.50.3%0.0
CB4119 (R)1Glu1.50.3%0.0
CB1503 (R)1Glu1.50.3%0.0
LHAV3e5 (R)1ACh1.50.3%0.0
AVLP267 (R)1ACh1.50.3%0.0
AVLP565 (R)1ACh1.50.3%0.0
mALB1 (L)1GABA1.50.3%0.0
LHPD3a2_a (R)1Glu1.50.3%0.0
CB4117 (R)1GABA1.50.3%0.0
LHPV6a1 (R)2ACh1.50.3%0.3
LHAD1d2 (R)2ACh1.50.3%0.3
LHAV6a7 (R)1ACh1.50.3%0.0
LHAV5c1 (R)1ACh1.50.3%0.0
SLP227 (R)2ACh1.50.3%0.3
LHAV1a1 (R)1ACh1.50.3%0.0
LHPV4i3 (R)3Glu1.50.3%0.0
CB3374 (R)1ACh10.2%0.0
LHAD1a4_b (R)1ACh10.2%0.0
LHAV2b6 (R)1ACh10.2%0.0
CB2733 (R)1Glu10.2%0.0
LHAD1a4_a (R)1ACh10.2%0.0
SLP222 (R)1ACh10.2%0.0
SMP001 (R)1unc10.2%0.0
CB1573 (R)1ACh10.2%0.0
LHAV2b7_b (R)1ACh10.2%0.0
CB0947 (R)1ACh10.2%0.0
CB1687 (R)1Glu10.2%0.0
AVLP047 (R)1ACh10.2%0.0
SLP455 (R)1ACh10.2%0.0
LoVP63 (R)1ACh10.2%0.0
DL1_adPN (R)1ACh10.2%0.0
SLP002 (R)2GABA10.2%0.0
LHAV4b4 (R)2GABA10.2%0.0
CB1771 (R)1ACh10.2%0.0
SLP112 (R)2ACh10.2%0.0
DL4_adPN (R)1ACh10.2%0.0
LHPD4d2_b (R)1Glu0.50.1%0.0
OA-VPM3 (L)1OA0.50.1%0.0
CB3075 (R)1ACh0.50.1%0.0
CB1590 (R)1Glu0.50.1%0.0
M_vPNml67 (R)1GABA0.50.1%0.0
CB2744 (R)1ACh0.50.1%0.0
LHPV4b2 (R)1Glu0.50.1%0.0
PLP169 (R)1ACh0.50.1%0.0
LHPD3a5 (R)1Glu0.50.1%0.0
SLP245 (R)1ACh0.50.1%0.0
LHAV4g7_b (R)1GABA0.50.1%0.0
LHPV6h2 (R)1ACh0.50.1%0.0
CB1701 (R)1GABA0.50.1%0.0
LHPV3a3_b (R)1ACh0.50.1%0.0
LHPV6a9_b (R)1ACh0.50.1%0.0
LHAV2e4_b (R)1ACh0.50.1%0.0
CB1513 (R)1ACh0.50.1%0.0
CB2687 (R)1ACh0.50.1%0.0
LHPV4h3 (R)1Glu0.50.1%0.0
LHAV2m1 (R)1GABA0.50.1%0.0
SLP457 (R)1unc0.50.1%0.0
LHPV6g1 (R)1Glu0.50.1%0.0
PPM1201 (R)1DA0.50.1%0.0
LHPV12a1 (R)1GABA0.50.1%0.0
VA3_adPN (R)1ACh0.50.1%0.0
LHPD4a1 (R)1Glu0.50.1%0.0
LHPV5c1_d (R)1ACh0.50.1%0.0
LHPV5b1 (R)1ACh0.50.1%0.0
LHAV4a5 (R)1GABA0.50.1%0.0
SLP129_c (R)1ACh0.50.1%0.0
LHPV4d4 (R)1Glu0.50.1%0.0
CB2678 (R)1GABA0.50.1%0.0
CB1899 (R)1Glu0.50.1%0.0
LHPV4c2 (R)1Glu0.50.1%0.0
CB3733 (R)1GABA0.50.1%0.0
CB1924 (R)1ACh0.50.1%0.0
SLP334 (R)1Glu0.50.1%0.0
CB1570 (R)1ACh0.50.1%0.0
CB1333 (R)1ACh0.50.1%0.0
LHPV4b7 (R)1Glu0.50.1%0.0
CB1448 (R)1ACh0.50.1%0.0
CB2983 (R)1GABA0.50.1%0.0
CB1735 (R)1Glu0.50.1%0.0
CB0648 (R)1ACh0.50.1%0.0
SLP186 (R)1unc0.50.1%0.0
LHAV4e1_b (R)1unc0.50.1%0.0
CB1352 (R)1Glu0.50.1%0.0
CB2831 (R)1GABA0.50.1%0.0
LHAV2b11 (R)1ACh0.50.1%0.0
CB2045 (R)1ACh0.50.1%0.0
CL100 (R)1ACh0.50.1%0.0
LHAV3e3_a (R)1ACh0.50.1%0.0
SLP444 (R)1unc0.50.1%0.0
AVLP267 (L)1ACh0.50.1%0.0
SLP069 (R)1Glu0.50.1%0.0
SLP076 (R)1Glu0.50.1%0.0
LHAD1h1 (R)1GABA0.50.1%0.0
LHPV5i1 (R)1ACh0.50.1%0.0
PPL203 (R)1unc0.50.1%0.0
AVLP492 (R)1ACh0.50.1%0.0
SLP471 (L)1ACh0.50.1%0.0
SLP438 (R)1unc0.50.1%0.0
VC5_lvPN (R)1ACh0.50.1%0.0

Outputs

downstream
partner
#NTconns
CB3729
%
Out
CV
LHAV4b2 (R)5GABA347.7%1.0
DL3_lPN (R)6ACh32.57.3%0.3
LHAD1d1 (R)4ACh255.6%0.9
LHAD1d2 (R)2ACh184.1%0.2
CB2802 (R)1ACh12.52.8%0.0
LHAV3e3_b (R)1ACh11.52.6%0.0
LHAV2c1 (R)3ACh11.52.6%0.5
LHAV4e1_b (R)2unc112.5%0.1
LHAD1b1_b (R)4ACh8.51.9%0.8
SLP129_c (R)2ACh81.8%0.9
CB2958 (R)1unc81.8%0.0
LHAD1c2 (R)2ACh81.8%0.9
CB2851 (R)2GABA81.8%0.5
LHAV5c1 (R)2ACh81.8%0.1
LHAV3i1 (R)1ACh81.8%0.0
LHAV4g1 (R)4GABA6.51.5%0.7
LHAV4a4 (R)5GABA6.51.5%0.8
CB3729 (R)2unc61.4%0.2
LHAV4d1 (R)3unc61.4%0.4
LHPV4b4 (R)5Glu61.4%0.4
CB1590 (R)3Glu5.51.2%0.5
LHAV3k6 (R)1ACh51.1%0.0
CB1804 (R)1ACh51.1%0.0
LHAV3n1 (R)3ACh51.1%0.3
CB2026 (R)1Glu4.51.0%0.0
CB0396 (R)1Glu40.9%0.0
LHPV1c1 (R)2ACh40.9%0.2
CB3288 (R)2Glu40.9%0.5
LHCENT13_b (R)1GABA3.50.8%0.0
LHAV2g2_a (R)1ACh3.50.8%0.0
CB1570 (R)1ACh3.50.8%0.0
LHAV2b10 (R)2ACh3.50.8%0.1
AVLP251 (R)1GABA30.7%0.0
LHCENT9 (R)1GABA30.7%0.0
CB3727 (R)1Glu30.7%0.0
SLP060 (R)1GABA30.7%0.0
LHAV4e4 (R)1unc30.7%0.0
LHAV2a3 (R)4ACh30.7%0.6
CB1201 (R)3ACh30.7%0.4
AVLP496 (R)1ACh2.50.6%0.0
SLP032 (R)1ACh2.50.6%0.0
LHAV4e1_a (R)1unc2.50.6%0.0
mAL4H (L)1GABA2.50.6%0.0
LHAV3a1_c (R)1ACh2.50.6%0.0
AVLP164 (R)1ACh2.50.6%0.0
LHAD1a4_a (R)1ACh2.50.6%0.0
LHAV4c2 (R)1GABA2.50.6%0.0
LHPV6h3,SLP276 (R)2ACh2.50.6%0.2
CB3023 (R)2ACh2.50.6%0.6
LHAD1b2 (R)1ACh20.5%0.0
CB2480 (R)1GABA20.5%0.0
LHPV4c2 (R)1Glu20.5%0.0
LHAV3k1 (R)1ACh20.5%0.0
mAL4E (L)1Glu20.5%0.0
LHPV6a3 (R)1ACh20.5%0.0
CB1735 (R)2Glu20.5%0.0
CB2189 (R)1Glu1.50.3%0.0
SLP259 (R)1Glu1.50.3%0.0
LHAD1i2_b (R)1ACh1.50.3%0.0
CB1289 (R)1ACh1.50.3%0.0
CB1610 (R)1Glu1.50.3%0.0
LHAD1j1 (R)1ACh1.50.3%0.0
LHAV3a1_b (R)1ACh1.50.3%0.0
SLP012 (R)1Glu1.50.3%0.0
AVLP227 (R)1ACh1.50.3%0.0
CB0197 (R)1GABA1.50.3%0.0
DA1_lPN (R)1ACh1.50.3%0.0
LHAD1a4_b (R)1ACh1.50.3%0.0
LHAV2p1 (R)1ACh1.50.3%0.0
CB1697 (R)2ACh1.50.3%0.3
CB1432 (R)2GABA1.50.3%0.3
LHAV4b4 (R)2GABA1.50.3%0.3
SLP228 (R)2ACh1.50.3%0.3
CB2003 (R)2Glu1.50.3%0.3
CB3124 (R)1ACh1.50.3%0.0
CB3016 (R)1GABA1.50.3%0.0
LHPV4a5 (R)2Glu1.50.3%0.3
mAL4B (L)1Glu10.2%0.0
CB1365 (R)1Glu10.2%0.0
SLP044_d (R)1ACh10.2%0.0
LHPV4d4 (R)1Glu10.2%0.0
LHAV4e2_b2 (R)1Glu10.2%0.0
CB1701 (R)1GABA10.2%0.0
CB1771 (R)1ACh10.2%0.0
CL099 (R)1ACh10.2%0.0
SMP042 (R)1Glu10.2%0.0
SLP376 (R)1Glu10.2%0.0
AVLP024_c (R)1ACh10.2%0.0
LHAV3h1 (R)1ACh10.2%0.0
SLP056 (R)1GABA10.2%0.0
SLP230 (R)1ACh10.2%0.0
CB1005 (R)1Glu10.2%0.0
LHAD1g1 (R)1GABA10.2%0.0
LHPV6a1 (R)1ACh10.2%0.0
SLP369 (R)1ACh10.2%0.0
LHPV4b2 (R)1Glu10.2%0.0
CB1924 (R)1ACh10.2%0.0
LHPV4b9 (R)1Glu10.2%0.0
LHAV1f1 (R)1ACh10.2%0.0
LHAV4g17 (R)1GABA10.2%0.0
LHPV4j3 (R)1Glu10.2%0.0
LHPV5b1 (R)2ACh10.2%0.0
CB1359 (R)2Glu10.2%0.0
LHPV6h1_b (R)1ACh10.2%0.0
CB3236 (R)1Glu10.2%0.0
CB1687 (R)1Glu10.2%0.0
LHAV4e7_b (R)2Glu10.2%0.0
LHAV4e2_b1 (R)2GABA10.2%0.0
SLP126 (R)1ACh0.50.1%0.0
SLP274 (R)1ACh0.50.1%0.0
LHPD4c1 (R)1ACh0.50.1%0.0
LHPV5b2 (R)1ACh0.50.1%0.0
CB2920 (R)1Glu0.50.1%0.0
LHAD3b1_a (R)1ACh0.50.1%0.0
SLP217 (R)1Glu0.50.1%0.0
LHAV5a8 (R)1ACh0.50.1%0.0
CB1923 (R)1ACh0.50.1%0.0
mAL4A (L)1Glu0.50.1%0.0
AVLP063 (R)1Glu0.50.1%0.0
AVLP225_b2 (R)1ACh0.50.1%0.0
CB3733 (R)1GABA0.50.1%0.0
CB2862 (R)1GABA0.50.1%0.0
CB2688 (R)1ACh0.50.1%0.0
LHAV6a5 (R)1ACh0.50.1%0.0
SLP002 (R)1GABA0.50.1%0.0
LHAD1f3_b (R)1Glu0.50.1%0.0
CB2861 (R)1unc0.50.1%0.0
SLP018 (R)1Glu0.50.1%0.0
CB2290 (R)1Glu0.50.1%0.0
LHPV3a1 (R)1ACh0.50.1%0.0
AVLP471 (R)1Glu0.50.1%0.0
LHAV3e3_a (R)1ACh0.50.1%0.0
SMP159 (R)1Glu0.50.1%0.0
LHAV3m1 (R)1GABA0.50.1%0.0
DSKMP3 (R)1unc0.50.1%0.0
AVLP432 (R)1ACh0.50.1%0.0
LHPV10c1 (R)1GABA0.50.1%0.0
CB2600 (R)1Glu0.50.1%0.0
CB2467 (R)1ACh0.50.1%0.0
CB2507 (R)1Glu0.50.1%0.0
LHAD1b4 (R)1ACh0.50.1%0.0
CB1212 (R)1Glu0.50.1%0.0
LHPV5h4 (R)1ACh0.50.1%0.0
CB2714 (R)1ACh0.50.1%0.0
SLP046 (R)1ACh0.50.1%0.0
CB2770 (R)1GABA0.50.1%0.0
CB1503 (R)1Glu0.50.1%0.0
CB1246 (R)1GABA0.50.1%0.0
CB2092 (R)1ACh0.50.1%0.0
CB1160 (R)1Glu0.50.1%0.0
LHAV2i4 (R)1ACh0.50.1%0.0
LHAV2g3 (R)1ACh0.50.1%0.0
CB2831 (R)1GABA0.50.1%0.0
CB1604 (R)1ACh0.50.1%0.0
CB2805 (R)1ACh0.50.1%0.0
LHAV5a10_b (R)1ACh0.50.1%0.0
LHAV1d2 (R)1ACh0.50.1%0.0
SLP465 (R)1ACh0.50.1%0.0
SLP269 (R)1ACh0.50.1%0.0
CSD (L)15-HT0.50.1%0.0
SMP026 (R)1ACh0.50.1%0.0
SLP239 (R)1ACh0.50.1%0.0