Male CNS – Cell Type Explorer

CB3673a(L)[DC]{09B_put1}

2
Neurons
Right: 1 | Left: 1
log ratio : 0.00
2,691
Synapses
Post: 2,086 | Pre: 605
log ratio : -1.79
3,551
Connections
Upstream: 1,725 | Downstream: 1,826
log ratio : 0.08
ACh (94.5% CL)
Neurotransmitter
2,691
Synapses per Neuron
Post: 2,086 | Pre: 605
log ratio : -1.79
3,551
Connections per Neuron
Upstream: 1,725 | Downstream: 1,826
log ratio : 0.08

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (6 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
SAD1,75284.0%-2.5430249.9%
CentralBrain-unspecified2009.6%-2.12467.6%
WED(R)251.2%3.1221735.9%
WED(L)1024.9%-1.35406.6%
SPS(R)50.2%-inf00.0%
AL(L)20.1%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
CB3673a
%
In
CV
JO-EV216ACh25514.8%0.8
JO-CA18ACh18911.0%0.4
CB0090 (R)1GABA1307.5%0.0
GNG636 (L)2GABA1207.0%0.2
WED106 (R)2GABA995.7%0.2
WED080 (R)1GABA804.6%0.0
WED203 (L)1GABA633.7%0.0
CB4176 (L)4GABA623.6%0.3
CB0214 (L)1GABA573.3%0.0
WED106 (L)2GABA533.1%0.3
JO-B1_a8ACh492.8%0.7
SAD112_c (L)1GABA422.4%0.0
AN10B017 (R)1ACh342.0%0.0
CB0307 (L)1GABA301.7%0.0
WED204 (L)3GABA251.4%0.6
AN01A055 (L)1ACh231.3%0.0
AN12B001 (L)1GABA150.9%0.0
WED196 (M)1GABA140.8%0.0
SAD111 (L)1GABA140.8%0.0
WED208 (L)1GABA140.8%0.0
SAD112_b (L)1GABA130.8%0.0
SAD013 (L)1GABA120.7%0.0
DNge113 (L)1ACh120.7%0.0
CB1023 (R)1Glu110.6%0.0
AN01A089 (L)1ACh110.6%0.0
AN12B001 (R)1GABA110.6%0.0
JO-B22ACh110.6%0.6
SAD078 (L)1unc100.6%0.0
WED206 (L)2GABA90.5%0.6
SAD104 (L)1GABA80.5%0.0
DNg56 (L)1GABA80.5%0.0
GNG124 (R)1GABA70.4%0.0
GNG702m (L)1unc70.4%0.0
SAD103 (M)1GABA70.4%0.0
JO-B32ACh70.4%0.7
AN01A055 (R)1ACh60.3%0.0
WED205 (L)1GABA60.3%0.0
CB1280 (L)1ACh60.3%0.0
GNG701m (L)1unc60.3%0.0
SAD051_a (L)2ACh60.3%0.3
CB3673b (L)2ACh60.3%0.0
AMMC028 (L)1GABA50.3%0.0
AN08B012 (R)1ACh50.3%0.0
SAD001 (L)2ACh50.3%0.2
CB2228 (L)3GABA50.3%0.3
ANXXX108 (L)1GABA40.2%0.0
CB1702 (L)1ACh40.2%0.0
CB2431 (L)1GABA40.2%0.0
AN09B026 (L)1ACh40.2%0.0
WED207 (L)1GABA40.2%0.0
SAD112_a (L)1GABA40.2%0.0
AN01A089 (R)1ACh40.2%0.0
JO-CA22ACh40.2%0.0
CB0466 (L)1GABA30.2%0.0
CB3692 (L)1ACh30.2%0.0
GNG144 (L)1GABA30.2%0.0
DNg30 (R)15-HT30.2%0.0
SAD057 (L)2ACh30.2%0.3
CB3024 (L)2GABA30.2%0.3
DNge138 (M)2unc30.2%0.3
CB4118 (L)3GABA30.2%0.0
SAD098 (M)1GABA20.1%0.0
AN17B008 (L)1GABA20.1%0.0
WED104 (R)1GABA20.1%0.0
CL022_c (L)1ACh20.1%0.0
CB3673a (R)1ACh20.1%0.0
AMMC013 (L)1ACh20.1%0.0
WED055_a (L)1GABA20.1%0.0
CB1948 (L)1GABA20.1%0.0
JO-B4_a1ACh20.1%0.0
CB3437 (L)1ACh20.1%0.0
AN17B002 (L)1GABA20.1%0.0
CB3381 (L)1GABA20.1%0.0
CB3437 (R)1ACh20.1%0.0
VES001 (L)1Glu20.1%0.0
SAD116 (L)1Glu20.1%0.0
CB4248 (L)1GABA20.1%0.0
CB4064 (L)1GABA20.1%0.0
AN12B006 (R)1unc20.1%0.0
CB0982 (L)1GABA20.1%0.0
GNG342 (M)1GABA20.1%0.0
SIP111m (L)1ACh20.1%0.0
CB0432 (L)1Glu20.1%0.0
DNp18 (L)1ACh20.1%0.0
AMMC-A1 (L)1ACh20.1%0.0
JO-mz2ACh20.1%0.0
CB0956 (L)2ACh20.1%0.0
SAD110 (L)2GABA20.1%0.0
WED166_d (L)2ACh20.1%0.0
CB1076 (L)2ACh20.1%0.0
JO-B4_b1ACh10.1%0.0
JO-B1_c1ACh10.1%0.0
LAL156_a (R)1ACh10.1%0.0
GNG149 (R)1GABA10.1%0.0
CB3207 (L)1GABA10.1%0.0
SAD049 (L)1ACh10.1%0.0
CB2153 (L)1ACh10.1%0.0
SAD014 (L)1GABA10.1%0.0
SAD052 (L)1ACh10.1%0.0
JO-EV11ACh10.1%0.0
WEDPN8C (L)1ACh10.1%0.0
SAD079 (L)1Glu10.1%0.0
CB2431 (R)1GABA10.1%0.0
PS037 (L)1ACh10.1%0.0
CB0986 (L)1GABA10.1%0.0
WED166_d (R)1ACh10.1%0.0
AMMC019 (L)1GABA10.1%0.0
CB1918 (L)1GABA10.1%0.0
WED045 (L)1ACh10.1%0.0
WED117 (L)1ACh10.1%0.0
AMMC029 (L)1GABA10.1%0.0
CB4094 (L)1ACh10.1%0.0
WED125 (L)1ACh10.1%0.0
WED202 (L)1GABA10.1%0.0
SAD064 (L)1ACh10.1%0.0
CB3673b (R)1ACh10.1%0.0
SAD099 (M)1GABA10.1%0.0
CB2664 (L)1ACh10.1%0.0
AMMC026 (L)1GABA10.1%0.0
SAD053 (L)1ACh10.1%0.0
DNg51 (L)1ACh10.1%0.0
DNge113 (R)1ACh10.1%0.0
WED109 (L)1ACh10.1%0.0
ALIN2 (L)1ACh10.1%0.0
CB1542 (R)1ACh10.1%0.0
SAD113 (L)1GABA10.1%0.0
WED119 (L)1Glu10.1%0.0
SAD077 (L)1Glu10.1%0.0
AMMC034_a (L)1ACh10.1%0.0
PVLP076 (R)1ACh10.1%0.0
PVLP031 (L)1GABA10.1%0.0
5-HTPMPV03 (L)15-HT10.1%0.0
GNG300 (R)1GABA10.1%0.0

Outputs

downstream
partner
#NTconns
CB3673a
%
Out
CV
WED166_d (R)6ACh1065.8%0.5
pIP1 (L)1ACh864.7%0.0
WEDPN1A (R)4GABA864.7%0.5
DNb05 (R)1ACh713.9%0.0
WED166_d (L)6ACh683.7%0.8
DNge113 (R)2ACh613.3%0.1
DNge054 (L)1GABA593.2%0.0
AMMC-A1 (L)3ACh452.5%0.4
pIP1 (R)1ACh442.4%0.0
DNb05 (L)1ACh351.9%0.0
DNp02 (L)1ACh321.8%0.0
SAD078 (L)3unc321.8%0.4
WED203 (L)1GABA311.7%0.0
DNp18 (L)1ACh311.7%0.0
PVLP076 (R)1ACh281.5%0.0
AN01A055 (R)1ACh271.5%0.0
SAD013 (L)1GABA271.5%0.0
DNp06 (L)1ACh271.5%0.0
DNg35 (L)1ACh241.3%0.0
SAD103 (M)1GABA241.3%0.0
DNp02 (R)1ACh241.3%0.0
WED125 (R)1ACh221.2%0.0
WED046 (R)1ACh221.2%0.0
PVLP151 (R)2ACh221.2%0.3
AN01A055 (L)1ACh211.2%0.0
WED109 (L)1ACh201.1%0.0
SAD116 (L)2Glu181.0%0.2
GNG506 (R)1GABA170.9%0.0
WED116 (L)1ACh170.9%0.0
WED203 (R)1GABA170.9%0.0
DNg15 (R)1ACh160.9%0.0
SAD077 (L)3Glu160.9%0.2
DNp05 (R)1ACh150.8%0.0
DNp06 (R)1ACh140.8%0.0
SAD098 (M)2GABA140.8%0.9
WED031 (R)3GABA140.8%0.6
CB4094 (L)1ACh120.7%0.0
CB1076 (L)3ACh120.7%0.4
PVLP141 (R)1ACh110.6%0.0
SAD092 (M)1GABA110.6%0.0
CB3544 (R)1GABA100.5%0.0
CB2153 (R)1ACh100.5%0.0
DNp103 (R)1ACh100.5%0.0
CB2228 (L)3GABA100.5%0.3
WED104 (R)1GABA90.5%0.0
WED166_a (R)1ACh90.5%0.0
CB1074 (L)1ACh90.5%0.0
DNg108 (L)1GABA90.5%0.0
PVLP122 (R)2ACh90.5%0.3
DNp12 (R)1ACh80.4%0.0
GNG506 (L)1GABA80.4%0.0
CB3400 (R)1ACh80.4%0.0
PVLP031 (R)1GABA80.4%0.0
WED119 (L)1Glu80.4%0.0
DNge054 (R)1GABA80.4%0.0
SAD079 (L)2Glu80.4%0.0
PVLP076 (L)1ACh70.4%0.0
WED109 (R)1ACh70.4%0.0
CB0307 (L)1GABA70.4%0.0
WED127 (R)1ACh70.4%0.0
WEDPN5 (R)1GABA70.4%0.0
M_spPN4t9 (R)1ACh70.4%0.0
DNg35 (R)1ACh70.4%0.0
DNg09_a (R)3ACh70.4%0.2
CB4176 (L)4GABA70.4%0.5
DNpe021 (R)1ACh60.3%0.0
SAD052 (L)1ACh60.3%0.0
DNp69 (L)1ACh60.3%0.0
CB2228 (R)1GABA60.3%0.0
AVLP722m (L)1ACh60.3%0.0
DNg09_b (R)1ACh60.3%0.0
AMMC034_a (L)1ACh60.3%0.0
DNp69 (R)1ACh60.3%0.0
AN01A089 (R)1ACh60.3%0.0
AVLP349 (R)1ACh50.3%0.0
DNg56 (L)1GABA50.3%0.0
CB0540 (R)1GABA50.3%0.0
PLP093 (R)1ACh50.3%0.0
PVLP141 (L)1ACh50.3%0.0
DNg108 (R)1GABA50.3%0.0
MeVCMe1 (L)1ACh50.3%0.0
DNge031 (L)1GABA50.3%0.0
WED117 (L)2ACh50.3%0.6
WED072 (R)2ACh50.3%0.2
PS197 (L)2ACh50.3%0.2
CB1314 (R)2GABA50.3%0.2
WED201 (R)3GABA50.3%0.6
WED091 (R)1ACh40.2%0.0
CB3673b (L)1ACh40.2%0.0
CB3710 (L)1ACh40.2%0.0
CB0046 (R)1GABA40.2%0.0
DNpe002 (L)1ACh40.2%0.0
AVLP501 (L)1ACh40.2%0.0
PVLP010 (L)1Glu40.2%0.0
CB4094 (R)2ACh40.2%0.5
WEDPN8C (L)2ACh40.2%0.5
WED106 (L)2GABA40.2%0.5
SAD051_a (L)3ACh40.2%0.4
CB0466 (L)1GABA30.2%0.0
PVLP022 (R)1GABA30.2%0.0
WED119 (R)1Glu30.2%0.0
AVLP399 (L)1ACh30.2%0.0
CB2431 (R)1GABA30.2%0.0
CB3692 (L)1ACh30.2%0.0
PLP012 (R)1ACh30.2%0.0
SAD076 (L)1Glu30.2%0.0
DNp12 (L)1ACh30.2%0.0
AN01A089 (L)1ACh30.2%0.0
AMMC034_b (L)1ACh30.2%0.0
GNG300 (R)1GABA30.2%0.0
SAD023 (L)2GABA30.2%0.3
JO-B1_a2ACh30.2%0.3
WED031 (L)2GABA30.2%0.3
CL323 (R)2ACh30.2%0.3
WED163 (R)2ACh30.2%0.3
WEDPN8C (R)2ACh30.2%0.3
CB3673b (R)2ACh30.2%0.3
JO-EV23ACh30.2%0.0
CB3673a (R)1ACh20.1%0.0
CB0214 (L)1GABA20.1%0.0
GNG149 (R)1GABA20.1%0.0
WED104 (L)1GABA20.1%0.0
CB1702 (L)1ACh20.1%0.0
CB1394_b (L)1Glu20.1%0.0
WED029 (R)1GABA20.1%0.0
WED055_a (R)1GABA20.1%0.0
DNge111 (R)1ACh20.1%0.0
WED106 (R)1GABA20.1%0.0
SAD064 (L)1ACh20.1%0.0
WEDPN5 (L)1GABA20.1%0.0
GNG312 (L)1Glu20.1%0.0
ANXXX057 (R)1ACh20.1%0.0
WED108 (R)1ACh20.1%0.0
SAD094 (L)1ACh20.1%0.0
SAD106 (R)1ACh20.1%0.0
SAD013 (R)1GABA20.1%0.0
CB0090 (L)1GABA20.1%0.0
PS304 (L)1GABA20.1%0.0
WED056 (R)2GABA20.1%0.0
CB3207 (L)2GABA20.1%0.0
WED118 (L)2ACh20.1%0.0
AVLP349 (L)1ACh10.1%0.0
SAD014 (R)1GABA10.1%0.0
WED030_b (R)1GABA10.1%0.0
CB1948 (L)1GABA10.1%0.0
CB2489 (L)1ACh10.1%0.0
AVLP452 (L)1ACh10.1%0.0
CB1023 (R)1Glu10.1%0.0
SAD057 (L)1ACh10.1%0.0
CL022_c (L)1ACh10.1%0.0
WED111 (L)1ACh10.1%0.0
CB3024 (L)1GABA10.1%0.0
AVLP598 (R)1ACh10.1%0.0
PS304 (R)1GABA10.1%0.0
CB1557 (L)1ACh10.1%0.0
SAD049 (L)1ACh10.1%0.0
CB4118 (L)1GABA10.1%0.0
CB2153 (L)1ACh10.1%0.0
CB0956 (L)1ACh10.1%0.0
WED207 (L)1GABA10.1%0.0
GNG331 (R)1ACh10.1%0.0
SAD021_a (L)1GABA10.1%0.0
AMMC018 (L)1GABA10.1%0.0
SAD011 (L)1GABA10.1%0.0
CB2940 (L)1ACh10.1%0.0
CB3381 (R)1GABA10.1%0.0
WED030_a (L)1GABA10.1%0.0
CB2558 (L)1ACh10.1%0.0
AMMC019 (L)1GABA10.1%0.0
CL054 (R)1GABA10.1%0.0
WED055_b (R)1GABA10.1%0.0
CB1533 (R)1ACh10.1%0.0
CB4248 (L)1GABA10.1%0.0
CB2380 (L)1GABA10.1%0.0
CB3201 (R)1ACh10.1%0.0
CB3400 (L)1ACh10.1%0.0
CB3024 (R)1GABA10.1%0.0
CB1314 (L)1GABA10.1%0.0
GNG343 (M)1GABA10.1%0.0
DNge113 (L)1ACh10.1%0.0
CB1932 (L)1ACh10.1%0.0
CB2664 (L)1ACh10.1%0.0
CB3588 (R)1ACh10.1%0.0
CB2521 (L)1ACh10.1%0.0
AVLP299_d (R)1ACh10.1%0.0
DNg51 (R)1ACh10.1%0.0
SAD053 (L)1ACh10.1%0.0
SIP111m (L)1ACh10.1%0.0
CB0432 (R)1Glu10.1%0.0
CB0432 (L)1Glu10.1%0.0
WED069 (L)1ACh10.1%0.0
PLP093 (L)1ACh10.1%0.0
CB4176 (R)1GABA10.1%0.0
CB3742 (R)1GABA10.1%0.0
SAD055 (L)1ACh10.1%0.0
SAD051_a (R)1ACh10.1%0.0
DNge041 (L)1ACh10.1%0.0
CB0397 (L)1GABA10.1%0.0
SAD106 (L)1ACh10.1%0.0
GNG583 (R)1ACh10.1%0.0
SAD091 (M)1GABA10.1%0.0
ALON3 (R)1Glu10.1%0.0
DNg32 (R)1ACh10.1%0.0
GNG124 (R)1GABA10.1%0.0
WED189 (M)1GABA10.1%0.0
PVLP122 (L)1ACh10.1%0.0
GNG651 (L)1unc10.1%0.0
AN12B001 (R)1GABA10.1%0.0
DNg24 (L)1GABA10.1%0.0
AN06B009 (R)1GABA10.1%0.0
GNG701m (L)1unc10.1%0.0
DNp103 (L)1ACh10.1%0.0
SAD113 (L)1GABA10.1%0.0
SAD096 (M)1GABA10.1%0.0
MeVC25 (L)1Glu10.1%0.0