Male CNS – Cell Type Explorer

CB3631(R)[DC]{09B_put1}

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
1,291
Total Synapses
Post: 859 | Pre: 432
log ratio : -0.99
1,291
Mean Synapses
Post: 859 | Pre: 432
log ratio : -0.99
ACh(97.2% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (8 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
WED(R)23026.8%-0.3018743.3%
SAD34940.6%-inf00.0%
AMMC(R)23927.8%-inf00.0%
WED(L)202.3%3.4521950.7%
CentralBrain-unspecified172.0%-0.77102.3%
PVLP(L)20.2%3.00163.7%
AMMC(L)20.2%-inf00.0%
PVLP(R)00.0%0.0000.0%

Connectivity

Inputs

upstream
partner
#NTconns
CB3631
%
In
CV
CB0758 (L)2GABA14719.8%0.1
CB2153 (L)2ACh699.3%0.7
JO-C/D/E17ACh618.2%0.8
CB2431 (R)3GABA557.4%0.4
AMMC024 (R)2GABA364.9%0.9
WED208 (L)1GABA314.2%0.0
ANXXX108 (R)1GABA212.8%0.0
WED203 (R)1GABA212.8%0.0
WEDPN9 (R)1ACh182.4%0.0
SAD112_c (R)1GABA152.0%0.0
SAD112_b (R)1GABA141.9%0.0
CB0517 (L)1Glu141.9%0.0
WED189 (M)1GABA141.9%0.0
CB3064 (R)2GABA111.5%0.3
GNG440 (R)3GABA111.5%0.6
GNG308 (L)1Glu101.3%0.0
CB4090 (R)1ACh101.3%0.0
CB0517 (R)1Glu91.2%0.0
ANXXX108 (L)1GABA81.1%0.0
CB2440 (R)1GABA70.9%0.0
SAD013 (R)1GABA70.9%0.0
AN02A001 (R)1Glu70.9%0.0
CB3743 (R)2GABA70.9%0.1
AMMC037 (R)1GABA50.7%0.0
AMMC012 (L)1ACh50.7%0.0
CB4180 (R)1GABA40.5%0.0
AMMC022 (R)2GABA40.5%0.5
SAD011 (R)2GABA40.5%0.5
CB3064 (L)2GABA40.5%0.5
WED099 (R)2Glu40.5%0.0
WED166_d (R)3ACh40.5%0.4
CB3741 (R)1GABA30.4%0.0
CB2789 (R)1ACh30.4%0.0
CB4176 (R)1GABA30.4%0.0
AMMC034_b (R)1ACh30.4%0.0
AVLP086 (R)1GABA30.4%0.0
SAD112_a (R)1GABA30.4%0.0
5-HTPMPV03 (R)15-HT30.4%0.0
CB3739 (R)2GABA30.4%0.3
CB1918 (R)2GABA30.4%0.3
WED056 (R)2GABA30.4%0.3
CB1496 (R)2GABA30.4%0.3
GNG506 (L)1GABA20.3%0.0
WED104 (R)1GABA20.3%0.0
WED182 (R)1ACh20.3%0.0
CB0307 (R)1GABA20.3%0.0
CB2351 (R)1GABA20.3%0.0
CB2475 (L)1ACh20.3%0.0
ALIN2 (R)1ACh20.3%0.0
CB1065 (R)1GABA20.3%0.0
GNG461 (L)1GABA20.3%0.0
CB0591 (R)1ACh20.3%0.0
SAD051_b (R)1ACh20.3%0.0
PLP211 (L)1unc20.3%0.0
SAD113 (R)1GABA20.3%0.0
SAD111 (R)1GABA20.3%0.0
SAD001 (R)2ACh20.3%0.0
AMMC011 (L)1ACh10.1%0.0
SAD014 (R)1GABA10.1%0.0
SAD080 (R)1Glu10.1%0.0
WED166_d (L)1ACh10.1%0.0
CB3320 (R)1GABA10.1%0.0
CB0228 (L)1Glu10.1%0.0
SAD093 (L)1ACh10.1%0.0
AOTU043 (L)1ACh10.1%0.0
CB1533 (L)1ACh10.1%0.0
AMMC003 (R)1GABA10.1%0.0
CB1407 (L)1ACh10.1%0.0
CB4094 (R)1ACh10.1%0.0
SAD019 (L)1GABA10.1%0.0
CB3437 (L)1ACh10.1%0.0
WEDPN8C (R)1ACh10.1%0.0
AMMC005 (L)1Glu10.1%0.0
WED091 (L)1ACh10.1%0.0
WED095 (L)1Glu10.1%0.0
WEDPN14 (R)1ACh10.1%0.0
SAD030 (R)1GABA10.1%0.0
CB4118 (R)1GABA10.1%0.0
CB1533 (R)1ACh10.1%0.0
CB2475 (R)1ACh10.1%0.0
WED127 (R)1ACh10.1%0.0
DNge111 (R)1ACh10.1%0.0
GNG124 (L)1GABA10.1%0.0
SAD116 (R)1Glu10.1%0.0
AMMC023 (R)1GABA10.1%0.0
VP5+VP3_l2PN (R)1ACh10.1%0.0
WED166_a (R)1ACh10.1%0.0
CB3673 (R)1ACh10.1%0.0
CB0466 (R)1GABA10.1%0.0
CB0540 (R)1GABA10.1%0.0
GNG126 (R)1GABA10.1%0.0
PLP211 (R)1unc10.1%0.0
DNd03 (L)1Glu10.1%0.0
VP4+VL1_l2PN (L)1ACh10.1%0.0
PVLP093 (R)1GABA10.1%0.0
GNG506 (R)1GABA10.1%0.0
CB0090 (L)1GABA10.1%0.0
SAD098 (M)1GABA10.1%0.0
DNp73 (R)1ACh10.1%0.0

Outputs

downstream
partner
#NTconns
CB3631
%
Out
CV
WED072 (L)3ACh766.2%0.0
WED072 (R)3ACh685.5%0.4
WED092 (R)4ACh524.2%1.5
WED093 (R)2ACh453.7%0.2
CB2431 (R)2GABA413.3%0.2
WED207 (L)3GABA362.9%1.1
WED207 (R)2GABA362.9%0.1
CB3064 (R)2GABA312.5%0.8
CB3064 (L)2GABA312.5%0.4
WED056 (R)3GABA292.4%0.7
SAD093 (R)1ACh282.3%0.0
ALIN2 (R)1ACh272.2%0.0
DNp12 (L)1ACh272.2%0.0
CB3400 (L)1ACh262.1%0.0
WED045 (R)1ACh252.0%0.0
WED092 (L)1ACh231.9%0.0
WED045 (L)1ACh201.6%0.0
CB2431 (L)2GABA201.6%0.2
WED166_a (R)2ACh201.6%0.0
WED104 (L)1GABA181.5%0.0
WED093 (L)2ACh181.5%0.8
WEDPN1A (L)3GABA181.5%0.6
SAD093 (L)1ACh171.4%0.0
AVLP120 (R)1ACh171.4%0.0
ALIN2 (L)1ACh171.4%0.0
WED106 (L)2GABA141.1%0.3
DNp12 (R)1ACh131.1%0.0
WED119 (R)1Glu131.1%0.0
CB2371 (L)1ACh131.1%0.0
CB3201 (R)1ACh110.9%0.0
WEDPN5 (R)1GABA110.9%0.0
CB0591 (R)1ACh110.9%0.0
WED119 (L)1Glu110.9%0.0
CB1044 (R)2ACh110.9%0.8
WEDPN9 (L)1ACh100.8%0.0
CB3741 (L)1GABA100.8%0.0
WEDPN5 (L)1GABA100.8%0.0
AVLP120 (L)3ACh100.8%0.4
WED104 (R)1GABA90.7%0.0
DNb05 (L)1ACh90.7%0.0
WED166_a (L)2ACh90.7%0.6
WED166_d (L)2ACh90.7%0.1
WED089 (R)1ACh80.7%0.0
CB3024 (R)4GABA80.7%0.6
WED089 (L)1ACh70.6%0.0
WED165 (R)1ACh70.6%0.0
PVLP093 (R)1GABA70.6%0.0
WEDPN11 (L)1Glu60.5%0.0
WED056 (L)1GABA60.5%0.0
AVLP349 (R)1ACh60.5%0.0
CB2824 (R)1GABA60.5%0.0
ALON3 (R)1Glu60.5%0.0
WED203 (R)1GABA60.5%0.0
CB2081_a (R)2ACh60.5%0.3
WED106 (R)1GABA50.4%0.0
PVLP126_b (R)1ACh50.4%0.0
CB0540 (R)1GABA50.4%0.0
WEDPN9 (R)1ACh50.4%0.0
ALIN3 (L)2ACh50.4%0.2
CL022_a (L)1ACh40.3%0.0
GNG461 (L)1GABA40.3%0.0
LoVP50 (R)1ACh40.3%0.0
WEDPN11 (R)1Glu40.3%0.0
CL022_c (R)1ACh40.3%0.0
CB0466 (R)1GABA40.3%0.0
WED061 (L)2ACh40.3%0.5
WED167 (R)2ACh40.3%0.5
CB3739 (R)1GABA30.2%0.0
WED182 (R)1ACh30.2%0.0
CL022_a (R)1ACh30.2%0.0
CB1055 (R)1GABA30.2%0.0
CL054 (L)1GABA30.2%0.0
CL054 (R)1GABA30.2%0.0
AVLP145 (R)1ACh30.2%0.0
WED203 (L)1GABA30.2%0.0
WEDPN1A (R)2GABA30.2%0.3
CB3201 (L)2ACh30.2%0.3
CB2972 (L)1ACh20.2%0.0
GNG300 (L)1GABA20.2%0.0
WED163 (R)1ACh20.2%0.0
CL022_c (L)1ACh20.2%0.0
WED197 (R)1GABA20.2%0.0
CB1533 (L)1ACh20.2%0.0
WED167 (L)1ACh20.2%0.0
WED032 (R)1GABA20.2%0.0
AMMC036 (R)1ACh20.2%0.0
WED057 (L)1GABA20.2%0.0
WED014 (R)1GABA20.2%0.0
WED030_a (L)1GABA20.2%0.0
CL253 (R)1GABA20.2%0.0
WED015 (R)1GABA20.2%0.0
CB2475 (L)1ACh20.2%0.0
WED091 (R)1ACh20.2%0.0
PVLP126_a (L)1ACh20.2%0.0
CB2371 (R)1ACh20.2%0.0
AVLP139 (L)1ACh20.2%0.0
LHPV2i1 (L)1ACh20.2%0.0
WED201 (L)1GABA20.2%0.0
WED202 (R)1GABA20.2%0.0
AVLP112 (R)1ACh20.2%0.0
DNge113 (L)1ACh20.2%0.0
WED061 (R)1ACh20.2%0.0
WED108 (R)1ACh20.2%0.0
WEDPN12 (L)1Glu20.2%0.0
CB4090 (R)1ACh20.2%0.0
CB1074 (L)1ACh20.2%0.0
PLP211 (L)1unc20.2%0.0
M_spPN4t9 (R)1ACh20.2%0.0
WED166_d (R)2ACh20.2%0.0
CB1074 (R)2ACh20.2%0.0
CB2664 (R)2ACh20.2%0.0
AVLP110_b (L)1ACh10.1%0.0
GNG506 (L)1GABA10.1%0.0
AVLP116 (L)1ACh10.1%0.0
CB1065 (L)1GABA10.1%0.0
GNG633 (R)1GABA10.1%0.0
AMMC020 (R)1GABA10.1%0.0
WED208 (L)1GABA10.1%0.0
CRE074 (L)1Glu10.1%0.0
AVLP281 (L)1ACh10.1%0.0
WED206 (L)1GABA10.1%0.0
PLP010 (L)1Glu10.1%0.0
DNp42 (R)1ACh10.1%0.0
CB1407 (L)1ACh10.1%0.0
CL022_b (L)1ACh10.1%0.0
SAD019 (L)1GABA10.1%0.0
CB2935 (R)1ACh10.1%0.0
CB3381 (L)1GABA10.1%0.0
WEDPN8C (R)1ACh10.1%0.0
WED031 (R)1GABA10.1%0.0
CB1044 (L)1ACh10.1%0.0
CB3400 (R)1ACh10.1%0.0
PS261 (R)1ACh10.1%0.0
PVLP126_b (L)1ACh10.1%0.0
AMMC015 (R)1GABA10.1%0.0
PVLP012 (L)1ACh10.1%0.0
PLP073 (R)1ACh10.1%0.0
WED060 (R)1ACh10.1%0.0
CB3682 (L)1ACh10.1%0.0
WEDPN12 (R)1Glu10.1%0.0
AVLP085 (R)1GABA10.1%0.0
AN01A055 (L)1ACh10.1%0.0
PLP015 (L)1GABA10.1%0.0
PLP016 (R)1GABA10.1%0.0
WED046 (R)1ACh10.1%0.0
WED108 (L)1ACh10.1%0.0
AVLP531 (R)1GABA10.1%0.0
LoVC18 (R)1DA10.1%0.0
CB3024 (L)1GABA10.1%0.0
CB0533 (R)1ACh10.1%0.0
CRE074 (R)1Glu10.1%0.0
DNp38 (L)1ACh10.1%0.0
PVLP093 (L)1GABA10.1%0.0