Male CNS – Cell Type Explorer

CB3326(L)

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
794
Total Synapses
Post: 624 | Pre: 170
log ratio : -1.88
794
Mean Synapses
Post: 624 | Pre: 170
log ratio : -1.88
unc(45.1% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (3 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
AL(L)58794.1%-2.2012875.3%
AL(R)365.8%0.224224.7%
CentralBrain-unspecified10.2%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
CB3326
%
In
CV
HRN_VP1d10ACh12723.6%0.3
lLN2T_a (L)3ACh5410.1%0.4
lLN2X12 (L)6ACh376.9%0.4
lLN1_bc (L)14ACh366.7%0.4
lLN2R_a (L)3GABA254.7%0.3
lLN2X11 (L)2ACh244.5%0.1
M_lPNm11D (L)5ACh224.1%1.0
lLN10 (L)1unc213.9%0.0
HRN_VP48ACh193.5%0.6
lLN2P_b (L)4GABA183.4%0.7
lLN2F_a (L)2unc132.4%0.1
ALIN2 (L)1ACh101.9%0.0
CB3417 (L)2unc81.5%0.8
OA-VUMa2 (M)2OA81.5%0.2
VA7l_adPN (L)1ACh71.3%0.0
lLN1_a (L)1ACh71.3%0.0
CB1824 (R)4GABA61.1%0.6
lLN2F_b (L)2GABA50.9%0.2
lLN2X12 (R)3ACh50.9%0.3
CB1824 (L)3GABA50.9%0.3
VP1d_il2PN (R)1ACh40.7%0.0
vLN24 (L)1ACh40.7%0.0
M_vPNml63 (L)2GABA40.7%0.5
lLN2T_b (L)2ACh40.7%0.5
lLN2T_e (L)2ACh40.7%0.5
VP1d+VP4_l2PN2 (L)1ACh30.6%0.0
ORN_DC42ACh30.6%0.3
M_lPNm11D (R)2ACh30.6%0.3
vLN26 (L)1unc20.4%0.0
v2LN50 (L)1Glu20.4%0.0
v2LN34D (L)1Glu20.4%0.0
VP1d_il2PN (L)1ACh20.4%0.0
VP1l+VP3_ilPN (R)1ACh20.4%0.0
VL1_ilPN (L)1ACh20.4%0.0
lLN12A (R)2ACh20.4%0.0
CB3007 (L)2GABA20.4%0.0
CB3417 (R)2unc20.4%0.0
OA-VUMa5 (M)2OA20.4%0.0
lLN1_bc (R)2ACh20.4%0.0
lLN2F_b (R)2GABA20.4%0.0
ORN_VM5d1ACh10.2%0.0
v2LN34D (R)1Glu10.2%0.0
vLN27 (L)1unc10.2%0.0
v2LN5 (L)1ACh10.2%0.0
il3LN6 (L)1GABA10.2%0.0
DNc01 (R)1unc10.2%0.0
v2LN42 (L)1Glu10.2%0.0
CB3172 (L)1unc10.2%0.0
CB3007 (R)1GABA10.2%0.0
CB3326 (R)1unc10.2%0.0
v2LN41 (L)1unc10.2%0.0
lLN12A (L)1ACh10.2%0.0
v2LN42 (R)1Glu10.2%0.0
lLN2P_c (L)1GABA10.2%0.0
lLN2X04 (L)1ACh10.2%0.0
DA2_lPN (L)1ACh10.2%0.0
lLN2P_c (R)1GABA10.2%0.0
lLN10 (R)1unc10.2%0.0
VP5+Z_adPN (L)1ACh10.2%0.0
lLN1_a (R)1ACh10.2%0.0
DL1_adPN (L)1ACh10.2%0.0
DL4_adPN (L)1ACh10.2%0.0
lLN2T_d (R)1unc10.2%0.0
lLN2X05 (L)1ACh10.2%0.0
lLN2T_c (L)1ACh10.2%0.0
VL1_ilPN (R)1ACh10.2%0.0
DNge138 (M)1unc10.2%0.0

Outputs

downstream
partner
#NTconns
CB3326
%
Out
CV
vLN24 (L)2ACh6917.0%0.0
lLN2X05 (L)2ACh327.9%0.1
lLN2F_b (L)2GABA276.7%0.0
M_adPNm3 (L)1ACh194.7%0.0
lLN2T_e (L)2ACh194.7%0.3
lLN2F_b (R)2GABA184.4%0.2
vLN24 (R)2ACh163.9%0.6
lLN2T_b (L)2ACh153.7%0.1
lLN2X05 (R)2ACh143.4%0.6
CB3417 (L)5unc112.7%0.5
M_adPNm3 (R)1ACh102.5%0.0
M_l2PNm16 (L)2ACh92.2%0.3
M_lv2PN9t49_b (L)1GABA61.5%0.0
lLN2T_b (R)1ACh61.5%0.0
DL4_adPN (L)1ACh61.5%0.0
v2LN34D (L)2Glu61.5%0.3
DA2_lPN (L)2ACh51.2%0.6
DM2_lPN (L)2ACh51.2%0.6
lLN10 (L)1unc41.0%0.0
VA7l_adPN (L)1ACh30.7%0.0
M_lvPNm28 (L)1ACh30.7%0.0
M_vPNml80 (R)1GABA30.7%0.0
DC4_vPN (R)1GABA30.7%0.0
l2LN20 (L)1GABA30.7%0.0
v2LN50 (R)1Glu30.7%0.0
VP1d+VP4_l2PN1 (L)1ACh30.7%0.0
v2LN34D (R)2Glu30.7%0.3
CB3417 (R)2unc30.7%0.3
M_lvPNm26 (L)2ACh30.7%0.3
M_l2PNm16 (R)2ACh30.7%0.3
VA5_lPN (L)2ACh30.7%0.3
CB1824 (R)3GABA30.7%0.0
M_vPNml84 (R)1GABA20.5%0.0
M_lvPNm25 (R)1ACh20.5%0.0
l2LN19 (L)1GABA20.5%0.0
CB3007 (L)1GABA20.5%0.0
lLN2P_a (L)1GABA20.5%0.0
M_lvPNm24 (L)1ACh20.5%0.0
VP1l+VP3_ilPN (R)1ACh20.5%0.0
DA4l_adPN (L)1ACh20.5%0.0
M_l2PNm14 (R)1ACh20.5%0.0
lLN1_a (L)1ACh20.5%0.0
M_l2PNl20 (R)1ACh20.5%0.0
DNb05 (L)1ACh20.5%0.0
lLN2X11 (L)2ACh20.5%0.0
lLN1_bc (L)2ACh20.5%0.0
HRN_VP1d1ACh10.2%0.0
lLN2X04 (R)1ACh10.2%0.0
HRN_VP41ACh10.2%0.0
CB3172 (L)1unc10.2%0.0
v2LN3A (L)1unc10.2%0.0
lLN14 (L)1GABA10.2%0.0
CB1824 (L)1GABA10.2%0.0
ORN_DC21ACh10.2%0.0
v2LN50 (L)1Glu10.2%0.0
M_lvPNm43 (R)1ACh10.2%0.0
v2LN34C (L)1ACh10.2%0.0
CB3172 (R)1unc10.2%0.0
v2LN34B (L)1Glu10.2%0.0
v2LN3A1_b (L)1ACh10.2%0.0
DC4_vPN (L)1GABA10.2%0.0
M_vPNml80 (L)1GABA10.2%0.0
M_lvPNm41 (L)1ACh10.2%0.0
M_lvPNm40 (R)1ACh10.2%0.0
M_lPNm11D (R)1ACh10.2%0.0
VP1l+_lvPN (L)1ACh10.2%0.0
M_lvPNm43 (L)1ACh10.2%0.0
M_lvPNm33 (R)1ACh10.2%0.0
M_lvPNm33 (L)1ACh10.2%0.0
CB4083 (R)1Glu10.2%0.0
DA3_adPN (L)1ACh10.2%0.0
lLN2X04 (L)1ACh10.2%0.0
M_lPNm11D (L)1ACh10.2%0.0
lLN2P_b (L)1GABA10.2%0.0
M_lvPNm24 (R)1ACh10.2%0.0
VP4_vPN (L)1GABA10.2%0.0
VP1l+VP3_ilPN (L)1ACh10.2%0.0
VC3_adPN (R)1ACh10.2%0.0
M_l2PNm14 (L)1ACh10.2%0.0
lLN2X12 (L)1ACh10.2%0.0
OA-VUMa2 (M)1OA10.2%0.0
DL1_adPN (L)1ACh10.2%0.0
lLN1_a (R)1ACh10.2%0.0
VP1d+VP4_l2PN1 (R)1ACh10.2%0.0
VES013 (L)1ACh10.2%0.0
VC2_lPN (L)1ACh10.2%0.0
il3LN6 (R)1GABA10.2%0.0
lLN2T_a (L)1ACh10.2%0.0