Male CNS – Cell Type Explorer

CB3240(L)

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
955
Total Synapses
Post: 684 | Pre: 271
log ratio : -1.34
955
Mean Synapses
Post: 684 | Pre: 271
log ratio : -1.34
ACh(91.4% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (5 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
LH(L)44064.3%-2.806323.2%
SLP(L)10815.8%0.7317966.1%
PLP(L)10415.2%-1.952710.0%
SCL(L)253.7%-4.6410.4%
CentralBrain-unspecified71.0%-2.8110.4%

Connectivity

Inputs

upstream
partner
#NTconns
CB3240
%
In
CV
VP1m_l2PN (L)1ACh487.6%0.0
DA3_adPN (L)2ACh386.0%0.2
LHPV4c1_b (L)4Glu325.1%0.5
CB0510 (L)1Glu274.3%0.0
LHAV3o1 (L)3ACh243.8%0.3
LHPV12a1 (L)1GABA233.6%0.0
SLP365 (L)1Glu203.2%0.0
V_ilPN (R)1ACh203.2%0.0
M_smPN6t2 (R)1GABA182.8%0.0
LoVP67 (L)1ACh162.5%0.0
LHPV6c1 (L)1ACh132.1%0.0
VC1_lPN (L)1ACh121.9%0.0
LHPV6a3 (L)2ACh111.7%0.6
mALB1 (R)1GABA91.4%0.0
CB1976b (L)1Glu81.3%0.0
LHAV3e3_a (L)1ACh81.3%0.0
VM6_adPN (L)1ACh81.3%0.0
LHPV4g2 (L)2Glu81.3%0.0
DA4l_adPN (L)1ACh71.1%0.0
LHPV4c2 (L)2Glu71.1%0.4
CB2786 (L)2Glu71.1%0.4
CB2920 (L)3Glu71.1%0.5
LHPV4c1_c (L)2Glu71.1%0.1
CB1160 (L)3Glu71.1%0.2
M_lvPNm38 (L)1ACh60.9%0.0
CB1735 (L)2Glu60.9%0.3
CB2904 (L)2Glu60.9%0.0
LHPV4b3 (L)4Glu60.9%0.6
SMP076 (L)1GABA50.8%0.0
CB3016 (L)1GABA50.8%0.0
SLP334 (L)3Glu50.8%0.6
CB1976 (L)1Glu40.6%0.0
LHPV4c3 (L)1Glu40.6%0.0
CB3724 (L)1ACh40.6%0.0
LHAV5a4_a (L)1ACh40.6%0.0
VP3+VP1l_ivPN (R)1ACh40.6%0.0
LHPV6a10 (L)1ACh40.6%0.0
PPL203 (L)1unc40.6%0.0
VA6_adPN (L)1ACh40.6%0.0
SLP088_a (L)2Glu40.6%0.5
LHAV4i1 (L)2GABA40.6%0.5
M_vPNml53 (L)3GABA40.6%0.4
LHCENT8 (L)2GABA40.6%0.0
LHAV4d1 (L)4unc40.6%0.0
SLP109 (L)1Glu30.5%0.0
DNp32 (L)1unc30.5%0.0
LHCENT2 (L)1GABA30.5%0.0
CB1286 (L)1Glu30.5%0.0
DL1_adPN (L)1ACh30.5%0.0
LHAV3g1 (L)2Glu30.5%0.3
LHPV4b4 (L)2Glu30.5%0.3
SLP360_d (L)2ACh30.5%0.3
LHPV2a3 (L)2GABA30.5%0.3
LHPV7a2 (L)2ACh30.5%0.3
CB2092 (L)1ACh20.3%0.0
LHPV6k2 (L)1Glu20.3%0.0
CL126 (L)1Glu20.3%0.0
SLP221 (L)1ACh20.3%0.0
CB2831 (L)1GABA20.3%0.0
LHPV6c2 (L)1ACh20.3%0.0
CB2148 (L)1ACh20.3%0.0
LHAV2b6 (L)1ACh20.3%0.0
CB1551 (L)1ACh20.3%0.0
LHPV6h2 (L)1ACh20.3%0.0
CB2733 (L)1Glu20.3%0.0
LHPV2b5 (L)1GABA20.3%0.0
DL3_lPN (L)1ACh20.3%0.0
SLP444 (R)1unc20.3%0.0
LHPV6o1 (L)1ACh20.3%0.0
SMP189 (L)1ACh20.3%0.0
SLP269 (L)1ACh20.3%0.0
SLP305 (L)1ACh20.3%0.0
VA1d_vPN (L)1GABA20.3%0.0
CL134 (L)1Glu20.3%0.0
LHAV3p1 (L)1Glu20.3%0.0
SLP457 (L)1unc20.3%0.0
CSD (R)15-HT20.3%0.0
DA4m_adPN (L)1ACh20.3%0.0
LHCENT3 (L)1GABA20.3%0.0
V_ilPN (L)1ACh20.3%0.0
SLP444 (L)2unc20.3%0.0
CB4119 (L)2Glu20.3%0.0
VP1m+VP2_lvPN2 (L)2ACh20.3%0.0
CB1687 (L)2Glu20.3%0.0
M_lvPNm37 (L)2ACh20.3%0.0
CB1500 (L)1ACh10.2%0.0
LHAD3b1_a (L)1ACh10.2%0.0
VA7l_adPN (L)1ACh10.2%0.0
SLP360_c (L)1ACh10.2%0.0
LHAV4g1 (L)1GABA10.2%0.0
LHPV4i4 (L)1Glu10.2%0.0
VL1_vPN (L)1GABA10.2%0.0
SLP314 (L)1Glu10.2%0.0
CB0943 (L)1ACh10.2%0.0
LHPD3a2_a (L)1Glu10.2%0.0
CB3733 (L)1GABA10.2%0.0
CB3055 (R)1ACh10.2%0.0
CB1846 (L)1Glu10.2%0.0
LHPD3a5 (L)1Glu10.2%0.0
CB1987 (L)1Glu10.2%0.0
SLP412_b (L)1Glu10.2%0.0
SMP410 (L)1ACh10.2%0.0
LHAV4a6 (L)1GABA10.2%0.0
LHPV4h1 (L)1Glu10.2%0.0
CB0103 (L)1Glu10.2%0.0
LHPV2i2_b (L)1ACh10.2%0.0
SLP384 (L)1Glu10.2%0.0
SLP337 (L)1Glu10.2%0.0
LHPD4b1 (L)1Glu10.2%0.0
M_vPNml87 (L)1GABA10.2%0.0
LHPV4c1_a (L)1Glu10.2%0.0
LHPV2a1_a (L)1GABA10.2%0.0
LHPV2a4 (L)1GABA10.2%0.0
CB1448 (L)1ACh10.2%0.0
LHPV4a5 (L)1Glu10.2%0.0
LHAV4b2 (L)1GABA10.2%0.0
LHPV4b7 (L)1Glu10.2%0.0
SLP087 (L)1Glu10.2%0.0
VM6_lvPN (L)1ACh10.2%0.0
M_vPNml68 (L)1GABA10.2%0.0
CB3393 (L)1Glu10.2%0.0
CB1056 (R)1Glu10.2%0.0
SLP273 (L)1ACh10.2%0.0
SLP360_a (L)1ACh10.2%0.0
PLP171 (L)1GABA10.2%0.0
SLP257 (L)1Glu10.2%0.0
LHPV4l1 (L)1Glu10.2%0.0
SLP202 (L)1Glu10.2%0.0
LHPV6i2_a (L)1ACh10.2%0.0
CB2224 (L)1ACh10.2%0.0
LHAV4g17 (L)1GABA10.2%0.0
LHAD2e1 (L)1ACh10.2%0.0
LHPV2a1_e (L)1GABA10.2%0.0
CB1387 (L)1ACh10.2%0.0
M_l2PNm17 (L)1ACh10.2%0.0
LHCENT13_b (L)1GABA10.2%0.0
VM2_adPN (L)1ACh10.2%0.0
M_ilPNm90 (L)1ACh10.2%0.0
SLP057 (L)1GABA10.2%0.0
DC4_adPN (L)1ACh10.2%0.0
DL4_adPN (L)1ACh10.2%0.0
LHPV6l2 (L)1Glu10.2%0.0
5-HTPMPV01 (R)15-HT10.2%0.0
DM2_lPN (L)1ACh10.2%0.0
VP1m+VP5_ilPN (L)1ACh10.2%0.0
AVLP571 (L)1ACh10.2%0.0
PPL201 (L)1DA10.2%0.0
DC1_adPN (L)1ACh10.2%0.0
OA-VPM3 (R)1OA10.2%0.0

Outputs

downstream
partner
#NTconns
CB3240
%
Out
CV
SLP088_a (L)4Glu204.4%0.5
SLP397 (L)1ACh183.9%0.0
CB2920 (L)3Glu173.7%0.4
SLP087 (L)3Glu163.5%0.5
SMP049 (L)1GABA143.1%0.0
SMP076 (L)1GABA132.8%0.0
CB3281 (L)1Glu132.8%0.0
SLP447 (L)1Glu112.4%0.0
SLP444 (L)2unc112.4%0.1
LHAV3n1 (L)4ACh112.4%0.5
LHPV1c2 (L)1ACh102.2%0.0
SMP527 (L)1ACh102.2%0.0
SLP358 (L)1Glu81.8%0.0
SLP365 (L)1Glu81.8%0.0
SLP158 (L)1ACh81.8%0.0
LHPD2d2 (L)1Glu81.8%0.0
SLP223 (L)2ACh71.5%0.7
SLP375 (L)2ACh71.5%0.4
CB1467 (L)2ACh71.5%0.4
CB2955 (L)2Glu71.5%0.1
CB1604 (L)2ACh71.5%0.1
LHAV3g1 (L)1Glu61.3%0.0
CB1160 (L)1Glu61.3%0.0
LHPV6c1 (L)1ACh61.3%0.0
SLP202 (L)1Glu61.3%0.0
AVLP571 (L)1ACh61.3%0.0
SLP204 (L)1Glu51.1%0.0
CL134 (L)1Glu51.1%0.0
SLP444 (R)2unc51.1%0.6
SLP141 (L)3Glu51.1%0.6
CB4123 (L)2Glu51.1%0.2
CB1685 (L)2Glu51.1%0.2
SLP104 (L)3Glu51.1%0.3
CB1286 (L)1Glu40.9%0.0
CB2437 (L)1Glu40.9%0.0
CB2269 (L)1Glu40.9%0.0
CB0373 (L)1Glu40.9%0.0
LHPV10a1a (L)1ACh40.9%0.0
CB1387 (L)2ACh40.9%0.0
CL094 (L)1ACh30.7%0.0
SLP069 (L)1Glu30.7%0.0
SLP134 (L)1Glu30.7%0.0
SLP344 (L)1Glu30.7%0.0
CL086_b (L)1ACh30.7%0.0
CB2797 (L)1ACh30.7%0.0
SMP444 (L)1Glu30.7%0.0
PLP023 (L)1GABA30.7%0.0
SLP208 (L)1GABA30.7%0.0
LHCENT3 (L)1GABA30.7%0.0
mALD1 (R)1GABA30.7%0.0
LHPV4b3 (L)2Glu30.7%0.3
SLP372 (L)2ACh30.7%0.3
LHAV3b13 (L)2ACh30.7%0.3
SLP171 (L)1Glu20.4%0.0
LoVP51 (L)1ACh20.4%0.0
SLP214 (L)1Glu20.4%0.0
SLP271 (L)1ACh20.4%0.0
CB3671 (L)1ACh20.4%0.0
SLP373 (L)1unc20.4%0.0
LHPD3a5 (L)1Glu20.4%0.0
LHAV7a7 (L)1Glu20.4%0.0
SA3 (L)1Glu20.4%0.0
SMP171 (L)1ACh20.4%0.0
CB2948 (L)1Glu20.4%0.0
SLP315 (L)1Glu20.4%0.0
CB3791 (L)1ACh20.4%0.0
CB1352 (L)1Glu20.4%0.0
CB1212 (L)1Glu20.4%0.0
DA3_adPN (L)1ACh20.4%0.0
SLP269 (L)1ACh20.4%0.0
SLP206 (L)1GABA20.4%0.0
CB1326 (L)2ACh20.4%0.0
LHPV5b6 (L)2ACh20.4%0.0
SLP088_b (L)2Glu20.4%0.0
SLP062 (L)2GABA20.4%0.0
LHPV6h3,SLP276 (L)1ACh10.2%0.0
LHPD4a1 (L)1Glu10.2%0.0
SLP364 (L)1Glu10.2%0.0
CB2092 (L)1ACh10.2%0.0
LHPV5e2 (L)1ACh10.2%0.0
LHCENT2 (L)1GABA10.2%0.0
VL1_vPN (L)1GABA10.2%0.0
LHAV6b3 (L)1ACh10.2%0.0
SLP266 (L)1Glu10.2%0.0
CB3075 (L)1ACh10.2%0.0
LHPV5b2 (L)1ACh10.2%0.0
CB4133 (L)1Glu10.2%0.0
VM6_lvPN (L)1ACh10.2%0.0
SLP028 (L)1Glu10.2%0.0
M_vPNml53 (L)1GABA10.2%0.0
SMP427 (L)1ACh10.2%0.0
LHPV5j1 (L)1ACh10.2%0.0
CB1901 (L)1ACh10.2%0.0
CB0943 (L)1ACh10.2%0.0
LHPV4c1_a (L)1Glu10.2%0.0
SLP142 (L)1Glu10.2%0.0
LHPV4c1_c (L)1Glu10.2%0.0
CB4086 (L)1ACh10.2%0.0
LHPV4c2 (L)1Glu10.2%0.0
CL141 (L)1Glu10.2%0.0
SLP363 (L)1Glu10.2%0.0
SLP334 (L)1Glu10.2%0.0
FB2I_b (L)1Glu10.2%0.0
SMP533 (L)1Glu10.2%0.0
SLP251 (L)1Glu10.2%0.0
CB1950 (L)1ACh10.2%0.0
SLP360_d (L)1ACh10.2%0.0
CB1178 (L)1Glu10.2%0.0
SLP224 (L)1ACh10.2%0.0
PLP064_b (L)1ACh10.2%0.0
SMP249 (L)1Glu10.2%0.0
SLP458 (L)1Glu10.2%0.0
CRZ01 (L)1unc10.2%0.0
SMP235 (L)1Glu10.2%0.0
DNp25 (L)1GABA10.2%0.0
SMP234 (L)1Glu10.2%0.0
VM2_adPN (L)1ACh10.2%0.0
LoVP70 (L)1ACh10.2%0.0
LHPV10c1 (L)1GABA10.2%0.0
WEDPN12 (R)1Glu10.2%0.0
PPL203 (L)1unc10.2%0.0
OA-VUMa2 (M)1OA10.2%0.0
LHPD5a1 (L)1Glu10.2%0.0
CSD (R)15-HT10.2%0.0
LHCENT8 (L)1GABA10.2%0.0
LHPV12a1 (L)1GABA10.2%0.0