Male CNS – Cell Type Explorer

CB3098(R)

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
757
Total Synapses
Post: 502 | Pre: 255
log ratio : -0.98
757
Mean Synapses
Post: 502 | Pre: 255
log ratio : -0.98
ACh(94.8% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (8 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
SPS(R)22645.0%-7.8210.4%
VES(L)499.8%1.7916966.3%
IB14528.9%-inf00.0%
LAL(L)193.8%2.078031.4%
GOR(R)275.4%-inf00.0%
CentralBrain-unspecified142.8%-1.4952.0%
ICL(R)193.8%-inf00.0%
PLP(R)30.6%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
CB3098
%
In
CV
aMe5 (R)13ACh489.9%0.6
CB1556 (L)7Glu428.6%0.8
LoVP90c (R)1ACh357.2%0.0
LT86 (R)1ACh296.0%0.0
CB2343 (L)3Glu255.1%0.8
PLP001 (R)1GABA214.3%0.0
VES053 (L)1ACh204.1%0.0
LoVP91 (L)1GABA193.9%0.0
OA-VUMa8 (M)1OA183.7%0.0
CB2462 (L)1Glu173.5%0.0
VES053 (R)1ACh153.1%0.0
GNG562 (L)1GABA112.3%0.0
IB059_a (R)1Glu81.6%0.0
DNae008 (L)1ACh71.4%0.0
GNG661 (L)1ACh71.4%0.0
IB097 (R)1Glu61.2%0.0
VES102 (R)1GABA61.2%0.0
LT69 (R)1ACh61.2%0.0
PS124 (L)1ACh61.2%0.0
VES106 (R)1GABA40.8%0.0
CB4095 (L)1Glu40.8%0.0
PS286 (L)1Glu40.8%0.0
ANXXX030 (L)1ACh40.8%0.0
LT51 (L)1Glu40.8%0.0
DNp14 (R)1ACh40.8%0.0
CL366 (R)1GABA40.8%0.0
LAL301m (L)2ACh40.8%0.5
PS285 (L)3Glu40.8%0.4
PS098 (L)1GABA30.6%0.0
IB092 (L)1Glu30.6%0.0
GNG103 (L)1GABA30.6%0.0
DNpe024 (L)1ACh30.6%0.0
LAL302m (L)1ACh30.6%0.0
IB059_b (R)1Glu30.6%0.0
CL066 (R)1GABA30.6%0.0
CL366 (L)1GABA30.6%0.0
GNG103 (R)1GABA30.6%0.0
SMP066 (R)1Glu20.4%0.0
PS124 (R)1ACh20.4%0.0
LAL090 (L)1Glu20.4%0.0
PLP143 (R)1GABA20.4%0.0
PS282 (L)1Glu20.4%0.0
PS197 (R)1ACh20.4%0.0
AN06B044 (L)1GABA20.4%0.0
IB059_a (L)1Glu20.4%0.0
PLP095 (R)1ACh20.4%0.0
LoVP90a (R)1ACh20.4%0.0
PS101 (R)1GABA20.4%0.0
DNa11 (L)1ACh20.4%0.0
CL286 (L)1ACh20.4%0.0
GNG663 (L)2GABA20.4%0.0
LC37 (R)2Glu20.4%0.0
LAL119 (L)1ACh10.2%0.0
IB022 (R)1ACh10.2%0.0
LAL123 (L)1unc10.2%0.0
LAL204 (L)1ACh10.2%0.0
LoVP28 (R)1ACh10.2%0.0
aIPg1 (L)1ACh10.2%0.0
PS019 (L)1ACh10.2%0.0
DNae007 (L)1ACh10.2%0.0
PPM1205 (L)1DA10.2%0.0
LAL018 (L)1ACh10.2%0.0
DNa03 (L)1ACh10.2%0.0
SMP472 (L)1ACh10.2%0.0
SAD008 (L)1ACh10.2%0.0
VES101 (L)1GABA10.2%0.0
CB1374 (R)1Glu10.2%0.0
LoVP19 (R)1ACh10.2%0.0
CB1556 (R)1Glu10.2%0.0
CB0431 (L)1ACh10.2%0.0
GNG547 (R)1GABA10.2%0.0
CRE014 (L)1ACh10.2%0.0
CL210_a (R)1ACh10.2%0.0
IB083 (R)1ACh10.2%0.0
IB031 (R)1Glu10.2%0.0
MeVPMe5 (R)1Glu10.2%0.0
CB1550 (R)1ACh10.2%0.0
CB2094 (R)1ACh10.2%0.0
CL183 (L)1Glu10.2%0.0
DNp16_b (R)1ACh10.2%0.0
SMP713m (R)1ACh10.2%0.0
VES063 (R)1ACh10.2%0.0
CB0086 (R)1GABA10.2%0.0
ANXXX094 (R)1ACh10.2%0.0
LAL010 (L)1ACh10.2%0.0
IB115 (L)1ACh10.2%0.0
MeVPMe4 (L)1Glu10.2%0.0
AN08B014 (R)1ACh10.2%0.0
PS089 (L)1GABA10.2%0.0
LAL169 (L)1ACh10.2%0.0
PS233 (L)1ACh10.2%0.0
GNG562 (R)1GABA10.2%0.0
PS322 (L)1Glu10.2%0.0
IB061 (R)1ACh10.2%0.0
GNG667 (L)1ACh10.2%0.0
PLP012 (L)1ACh10.2%0.0
VES074 (L)1ACh10.2%0.0
LoVCLo3 (R)1OA10.2%0.0
5-HTPMPV03 (R)15-HT10.2%0.0

Outputs

downstream
partner
#NTconns
CB3098
%
Out
CV
LAL302m (L)4ACh9212.5%0.8
PS322 (L)1Glu648.7%0.0
DNa02 (L)1ACh598.0%0.0
DNae001 (L)1ACh476.4%0.0
LAL040 (R)1GABA415.6%0.0
LAL301m (L)2ACh395.3%0.3
PS019 (L)2ACh283.8%0.1
LAL083 (L)2Glu253.4%0.8
LAL084 (L)1Glu243.3%0.0
PPM1205 (L)1DA223.0%0.0
DNa11 (L)1ACh192.6%0.0
LAL300m (L)2ACh192.6%0.9
DNa15 (L)1ACh172.3%0.0
CRE014 (L)2ACh152.0%0.2
MDN (L)2ACh141.9%0.0
DNb02 (L)2Glu131.8%0.5
CRE015 (L)1ACh121.6%0.0
DNa06 (L)1ACh111.5%0.0
DNpe024 (L)1ACh101.4%0.0
DNg13 (L)1ACh101.4%0.0
DNg88 (L)1ACh101.4%0.0
LAL074 (L)1Glu91.2%0.0
LAL159 (L)1ACh71.0%0.0
DNa13 (L)2ACh60.8%0.7
LAL113 (L)2GABA60.8%0.7
LAL046 (L)1GABA50.7%0.0
LAL049 (L)1GABA50.7%0.0
GNG590 (L)1GABA40.5%0.0
GNG562 (L)1GABA40.5%0.0
DNa03 (L)1ACh40.5%0.0
LAL127 (L)1GABA40.5%0.0
DNge041 (L)1ACh40.5%0.0
DNpe023 (L)1ACh40.5%0.0
MDN (R)1ACh40.5%0.0
PS186 (L)1Glu30.4%0.0
LAL124 (L)1Glu30.4%0.0
CB1550 (R)1ACh30.4%0.0
SMP110 (L)1ACh30.4%0.0
AN03A008 (L)1ACh30.4%0.0
LNO2 (L)1Glu30.4%0.0
DNg75 (L)1ACh30.4%0.0
LAL204 (L)1ACh20.3%0.0
LAL073 (L)1Glu20.3%0.0
LAL014 (L)1ACh20.3%0.0
LAL010 (L)1ACh20.3%0.0
LAL111 (L)1GABA20.3%0.0
mALD4 (R)1GABA20.3%0.0
LAL123 (R)1unc20.3%0.0
DNp13 (L)1ACh20.3%0.0
PS100 (L)1GABA20.3%0.0
aIPg6 (L)2ACh20.3%0.0
AOTU042 (L)2GABA20.3%0.0
IB022 (R)1ACh10.1%0.0
LAL123 (L)1unc10.1%0.0
PLP228 (R)1ACh10.1%0.0
AOTU033 (L)1ACh10.1%0.0
DNpe023 (R)1ACh10.1%0.0
CB3419 (L)1GABA10.1%0.0
CL248 (L)1GABA10.1%0.0
VES007 (L)1ACh10.1%0.0
DNp08 (L)1Glu10.1%0.0
PS186 (R)1Glu10.1%0.0
PVLP060 (L)1GABA10.1%0.0
GNG663 (L)1GABA10.1%0.0
CB1554 (R)1ACh10.1%0.0
PS187 (L)1Glu10.1%0.0
PS049 (L)1GABA10.1%0.0
CB2094 (R)1ACh10.1%0.0
PVLP202m (L)1ACh10.1%0.0
LAL167 (R)1ACh10.1%0.0
PVLP144 (R)1ACh10.1%0.0
ITP (R)1unc10.1%0.0
aIPg1 (L)1ACh10.1%0.0
CB0751 (L)1Glu10.1%0.0
LAL163 (R)1ACh10.1%0.0
IB023 (R)1ACh10.1%0.0
PS089 (L)1GABA10.1%0.0
PS065 (L)1GABA10.1%0.0
PVLP140 (L)1GABA10.1%0.0
PS013 (L)1ACh10.1%0.0
VES045 (L)1GABA10.1%0.0
CB0677 (L)1GABA10.1%0.0
AOTU100m (R)1ACh10.1%0.0
PS196_a (R)1ACh10.1%0.0
OA-VUMa1 (M)1OA10.1%0.0
VES041 (L)1GABA10.1%0.0
AOTU019 (R)1GABA10.1%0.0