Male CNS – Cell Type Explorer

CB3080(L)

4
Total Neurons
Right: 2 | Left: 2
log ratio : 0.00
1,452
Total Synapses
Post: 974 | Pre: 478
log ratio : -1.03
726
Mean Synapses
Post: 487 | Pre: 239
log ratio : -1.03
Glu(82.7% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (10 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
SCL(L)13413.8%0.4418238.1%
ICL(L)15015.4%-0.0414630.5%
SIP(L)23924.5%-5.0971.5%
SMP(L)23023.6%-4.52102.1%
PLP(L)808.2%-0.426012.6%
SLP(L)697.1%-0.65449.2%
CRE(L)535.4%-4.7320.4%
CentralBrain-unspecified121.2%1.00245.0%
LH(L)50.5%-0.7430.6%
aL(L)20.2%-inf00.0%

Connectivity

Inputs

upstream
partner
#NTconns
CB3080
%
In
CV
CL102 (L)1ACh25.55.7%0.0
LoVP6 (L)10ACh18.54.1%0.5
LC34 (L)4ACh13.53.0%0.7
PLP246 (L)1ACh132.9%0.0
SMP144 (L)1Glu10.52.3%0.0
LoVP21 (L)2ACh9.52.1%0.4
PLP075 (L)1GABA81.8%0.0
LoVCLo2 (L)1unc81.8%0.0
CRE023 (L)1Glu81.8%0.0
SMP131 (R)1Glu7.51.7%0.0
aMe20 (L)1ACh7.51.7%0.0
SMP132 (L)2Glu71.6%0.9
SIP067 (L)1ACh6.51.4%0.0
mALB5 (R)1GABA61.3%0.0
LoVCLo2 (R)1unc61.3%0.0
CRE093 (L)2ACh61.3%0.2
ATL004 (L)1Glu5.51.2%0.0
PLP022 (L)1GABA5.51.2%0.0
SMP010 (L)1Glu5.51.2%0.0
CB1876 (L)4ACh5.51.2%0.7
SIP032 (L)3ACh5.51.2%0.5
SMP150 (L)1Glu51.1%0.0
LoVP8 (L)3ACh51.1%0.8
LoVP21 (R)2ACh51.1%0.2
SMP388 (L)1ACh4.51.0%0.0
SMP577 (R)1ACh4.51.0%0.0
LoVP81 (L)2ACh40.9%0.8
SMP404 (L)1ACh40.9%0.0
SIP069 (L)1ACh40.9%0.0
LoVP79 (L)1ACh40.9%0.0
LoVP56 (L)1Glu3.50.8%0.0
SMP131 (L)1Glu3.50.8%0.0
SMP184 (R)1ACh3.50.8%0.0
LT59 (L)1ACh3.50.8%0.0
SMP150 (R)1Glu3.50.8%0.0
CRE040 (L)1GABA3.50.8%0.0
SMP248_d (L)1ACh3.50.8%0.0
CL225 (R)3ACh3.50.8%0.4
FC (R)1ACh30.7%0.0
SMP153_a (L)1ACh30.7%0.0
SIP064 (L)1ACh30.7%0.0
SMP144 (R)1Glu30.7%0.0
SMP279_c (L)2Glu30.7%0.3
SMP185 (L)1ACh30.7%0.0
SMP130 (L)1Glu2.50.6%0.0
SMP192 (L)1ACh2.50.6%0.0
SLP247 (L)1ACh2.50.6%0.0
SMP381_a (L)2ACh2.50.6%0.6
SMP409 (L)2ACh2.50.6%0.2
CB3015 (L)1ACh2.50.6%0.0
CB1220 (L)2Glu2.50.6%0.6
SMP377 (L)2ACh2.50.6%0.6
CRE093 (R)2ACh2.50.6%0.2
SMP133 (R)3Glu2.50.6%0.3
SMP134 (R)1Glu20.4%0.0
SMP134 (L)1Glu20.4%0.0
LoVP66 (L)1ACh20.4%0.0
LAL137 (L)1ACh20.4%0.0
aMe22 (L)1Glu20.4%0.0
SIP064 (R)1ACh20.4%0.0
SLP003 (L)1GABA20.4%0.0
VES041 (L)1GABA20.4%0.0
PPL107 (L)1DA20.4%0.0
LoVP83 (L)2ACh20.4%0.5
SMP008 (L)2ACh20.4%0.5
LAL030_b (L)2ACh20.4%0.0
PLP004 (L)1Glu1.50.3%0.0
CB2787 (L)1ACh1.50.3%0.0
SMP132 (R)1Glu1.50.3%0.0
SIP086 (L)1Glu1.50.3%0.0
SMP192 (R)1ACh1.50.3%0.0
LHPV6m1 (L)1Glu1.50.3%0.0
LHCENT3 (L)1GABA1.50.3%0.0
SMP135 (L)1Glu1.50.3%0.0
SLP134 (L)1Glu1.50.3%0.0
PLP042_b (L)1Glu1.50.3%0.0
LoVP80 (L)1ACh1.50.3%0.0
SMP489 (L)1ACh1.50.3%0.0
SMP507 (L)1ACh1.50.3%0.0
SMP593 (R)1GABA1.50.3%0.0
VES041 (R)1GABA1.50.3%0.0
AstA1 (L)1GABA1.50.3%0.0
SMP270 (L)2ACh1.50.3%0.3
CRE094 (L)2ACh1.50.3%0.3
CL013 (L)2Glu1.50.3%0.3
CL352 (R)1Glu1.50.3%0.0
5-HTPMPV01 (R)15-HT1.50.3%0.0
CRE040 (R)1GABA1.50.3%0.0
CB1956 (L)2ACh1.50.3%0.3
SMP405 (L)2ACh1.50.3%0.3
MeVP_unclear (L)1Glu1.50.3%0.0
CL086_c (L)2ACh1.50.3%0.3
CB1744 (L)1ACh10.2%0.0
PLP218 (L)1Glu10.2%0.0
CB3074 (R)1ACh10.2%0.0
CRE005 (R)1ACh10.2%0.0
CB2937 (L)1Glu10.2%0.0
LHPV5g1_a (L)1ACh10.2%0.0
SMP408_a (L)1ACh10.2%0.0
SMP274 (L)1Glu10.2%0.0
LHPD5f1 (L)1Glu10.2%0.0
SMP597 (L)1ACh10.2%0.0
SMP152 (L)1ACh10.2%0.0
SMP012 (L)1Glu10.2%0.0
SLP004 (L)1GABA10.2%0.0
FB6S (L)1Glu10.2%0.0
CB2638 (L)1ACh10.2%0.0
SMP407 (L)1ACh10.2%0.0
CB1871 (R)1Glu10.2%0.0
CL128_c (L)1GABA10.2%0.0
CL128_b (L)1GABA10.2%0.0
CL014 (L)1Glu10.2%0.0
PRW012 (L)1ACh10.2%0.0
M_lPNm13 (L)1ACh10.2%0.0
LHPD2a1 (L)1ACh10.2%0.0
SMP143 (R)1unc10.2%0.0
CL327 (L)1ACh10.2%0.0
LAL129 (R)1ACh10.2%0.0
SMP385 (R)1unc10.2%0.0
SMP577 (L)1ACh10.2%0.0
MBON33 (L)1ACh10.2%0.0
mALD1 (R)1GABA10.2%0.0
LC20a (L)2ACh10.2%0.0
CL042 (L)1Glu10.2%0.0
SMP136 (L)1Glu10.2%0.0
SMP476 (L)1ACh10.2%0.0
SMP369 (L)1ACh10.2%0.0
M_l2PNl20 (L)1ACh10.2%0.0
oviIN (L)1GABA10.2%0.0
SMP089 (R)2Glu10.2%0.0
CL086_e (L)2ACh10.2%0.0
LoVP84 (L)2ACh10.2%0.0
AVLP496 (L)2ACh10.2%0.0
CRE016 (L)1ACh0.50.1%0.0
DNp27 (L)1ACh0.50.1%0.0
SMP178 (L)1ACh0.50.1%0.0
PLP001 (L)1GABA0.50.1%0.0
SMP142 (R)1unc0.50.1%0.0
CRE074 (L)1Glu0.50.1%0.0
SMP142 (L)1unc0.50.1%0.0
CL086_b (L)1ACh0.50.1%0.0
SLP328 (L)1ACh0.50.1%0.0
CRE013 (L)1GABA0.50.1%0.0
SMP135 (R)1Glu0.50.1%0.0
SIP022 (L)1ACh0.50.1%0.0
CL147 (L)1Glu0.50.1%0.0
CB1368 (L)1Glu0.50.1%0.0
SIP037 (L)1Glu0.50.1%0.0
CB3768 (L)1ACh0.50.1%0.0
CL182 (L)1Glu0.50.1%0.0
SMP476 (R)1ACh0.50.1%0.0
CB3044 (R)1ACh0.50.1%0.0
SIP089 (L)1GABA0.50.1%0.0
SIP053 (L)1ACh0.50.1%0.0
CL141 (L)1Glu0.50.1%0.0
SMP566 (L)1ACh0.50.1%0.0
SLP459 (L)1Glu0.50.1%0.0
CL011 (L)1Glu0.50.1%0.0
CL087 (L)1ACh0.50.1%0.0
FB2H_a (L)1Glu0.50.1%0.0
SIP071 (L)1ACh0.50.1%0.0
SLP360_d (L)1ACh0.50.1%0.0
SAD115 (R)1ACh0.50.1%0.0
SMP011_a (L)1Glu0.50.1%0.0
CL179 (R)1Glu0.50.1%0.0
CL340 (L)1ACh0.50.1%0.0
SMP503 (L)1unc0.50.1%0.0
IB017 (L)1ACh0.50.1%0.0
SMP181 (L)1unc0.50.1%0.0
LHAD2b1 (L)1ACh0.50.1%0.0
SIP087 (L)1unc0.50.1%0.0
ExR3 (L)15-HT0.50.1%0.0
SMP077 (L)1GABA0.50.1%0.0
PLP216 (L)1GABA0.50.1%0.0
CL357 (R)1unc0.50.1%0.0
OA-VUMa3 (M)1OA0.50.1%0.0
SMP199 (L)1ACh0.50.1%0.0
LPT54 (L)1ACh0.50.1%0.0
oviIN (R)1GABA0.50.1%0.0
CL362 (L)1ACh0.50.1%0.0
SMP058 (L)1Glu0.50.1%0.0
CRE018 (L)1ACh0.50.1%0.0
SLP098 (L)1Glu0.50.1%0.0
SIP004 (L)1ACh0.50.1%0.0
SMP164 (L)1GABA0.50.1%0.0
SMP437 (L)1ACh0.50.1%0.0
LoVP5 (L)1ACh0.50.1%0.0
CB1975 (L)1Glu0.50.1%0.0
SMP382 (L)1ACh0.50.1%0.0
CB3895 (L)1ACh0.50.1%0.0
SMP427 (L)1ACh0.50.1%0.0
CB2113 (L)1ACh0.50.1%0.0
CRE095 (L)1ACh0.50.1%0.0
SMP408_b (L)1ACh0.50.1%0.0
CB3362 (L)1Glu0.50.1%0.0
SMP399_b (L)1ACh0.50.1%0.0
FB5G_c (L)1Glu0.50.1%0.0
LoVP27 (L)1ACh0.50.1%0.0
CRE089 (R)1ACh0.50.1%0.0
LAL052 (L)1Glu0.50.1%0.0
SIP027 (L)1GABA0.50.1%0.0
SLP308 (L)1Glu0.50.1%0.0
LHPV5g1_b (L)1ACh0.50.1%0.0
CRE017 (L)1ACh0.50.1%0.0
SMP448 (L)1Glu0.50.1%0.0
SLP360_a (L)1ACh0.50.1%0.0
SIP024 (L)1ACh0.50.1%0.0
CL170 (L)1ACh0.50.1%0.0
PS177 (R)1Glu0.50.1%0.0
SMP143 (L)1unc0.50.1%0.0
SMP110 (L)1ACh0.50.1%0.0
PS097 (R)1GABA0.50.1%0.0
SMP180 (R)1ACh0.50.1%0.0
CB4073 (R)1ACh0.50.1%0.0
SMP184 (L)1ACh0.50.1%0.0
SMP588 (L)1unc0.50.1%0.0
CL021 (L)1ACh0.50.1%0.0
CL089_b (L)1ACh0.50.1%0.0
SMP506 (L)1ACh0.50.1%0.0
PLP231 (L)1ACh0.50.1%0.0
CL021 (R)1ACh0.50.1%0.0
LHPD5d1 (R)1ACh0.50.1%0.0
LHPV5e3 (R)1ACh0.50.1%0.0
LoVC18 (L)1DA0.50.1%0.0
CL063 (L)1GABA0.50.1%0.0
LHPV6q1 (L)1unc0.50.1%0.0
OA-VPM3 (R)1OA0.50.1%0.0
OA-VUMa6 (M)1OA0.50.1%0.0

Outputs

downstream
partner
#NTconns
CB3080
%
Out
CV
CL362 (L)1ACh39.58.9%0.0
SMP057 (L)2Glu368.1%0.2
LoVC19 (L)2ACh25.55.7%0.0
CL179 (L)1Glu224.9%0.0
CL102 (L)1ACh173.8%0.0
IB017 (L)1ACh163.6%0.0
CL162 (L)1ACh153.4%0.0
SMP202 (L)1ACh132.9%0.0
LHPV5g2 (L)3ACh10.52.4%0.5
CL011 (L)1Glu92.0%0.0
CB2638 (L)3ACh8.51.9%0.6
CB3541 (L)2ACh81.8%0.2
CL327 (L)1ACh7.51.7%0.0
SMP257 (L)1ACh71.6%0.0
LAL009 (L)1ACh6.51.5%0.0
ATL023 (L)1Glu6.51.5%0.0
CB4112 (L)3Glu61.3%0.5
FB6H (L)1unc5.51.2%0.0
SMP386 (L)1ACh5.51.2%0.0
SMP192 (L)1ACh5.51.2%0.0
MeVC3 (L)1ACh51.1%0.0
LAL141 (L)1ACh4.51.0%0.0
SMP505 (L)1ACh4.51.0%0.0
SMP178 (L)1ACh4.51.0%0.0
PLP122_a (L)1ACh4.51.0%0.0
CL003 (L)1Glu4.51.0%0.0
FB2E (L)1Glu40.9%0.0
CB0937 (L)2Glu40.9%0.2
CB1876 (L)5ACh40.9%0.8
FB2H_b (L)1Glu3.50.8%0.0
CB0633 (L)1Glu30.7%0.0
CRE108 (L)1ACh30.7%0.0
CB4022 (L)1ACh30.7%0.0
MeVC3 (R)1ACh30.7%0.0
CL014 (L)3Glu30.7%0.4
SMP374 (L)2Glu30.7%0.0
CB3015 (L)1ACh2.50.6%0.0
LHPV5g1_b (L)1ACh2.50.6%0.0
LoVP79 (L)1ACh2.50.6%0.0
LC34 (L)2ACh2.50.6%0.2
CB3010 (L)2ACh2.50.6%0.6
SMP207 (L)2Glu2.50.6%0.2
MeVC27 (L)2unc2.50.6%0.2
CRE075 (L)1Glu2.50.6%0.0
LT59 (L)1ACh20.4%0.0
SMP527 (L)1ACh20.4%0.0
PLP149 (L)2GABA20.4%0.5
CL328 (L)1ACh20.4%0.0
SIP032 (L)3ACh20.4%0.4
CL008 (L)2Glu20.4%0.0
CL042 (L)2Glu20.4%0.0
CL185 (L)1Glu1.50.3%0.0
PLP218 (L)1Glu1.50.3%0.0
CL086_c (L)1ACh1.50.3%0.0
5-HTPMPV01 (R)15-HT1.50.3%0.0
CL086_e (L)1ACh1.50.3%0.0
M_l2PNl20 (L)1ACh1.50.3%0.0
LHPV9b1 (L)1Glu1.50.3%0.0
SMP581 (L)1ACh1.50.3%0.0
CL013 (L)2Glu1.50.3%0.3
CL007 (L)1ACh1.50.3%0.0
SMP270 (L)1ACh1.50.3%0.0
LoVC19 (R)1ACh1.50.3%0.0
5-HTPMPV03 (R)15-HT1.50.3%0.0
SIP033 (L)1Glu10.2%0.0
SMP386 (R)1ACh10.2%0.0
CL090_c (L)1ACh10.2%0.0
CB2975 (L)1ACh10.2%0.0
PLP159 (L)1GABA10.2%0.0
CB4010 (L)1ACh10.2%0.0
CB3691 (R)1unc10.2%0.0
SMP445 (L)1Glu10.2%0.0
LHPV7a2 (L)1ACh10.2%0.0
PLP197 (L)1GABA10.2%0.0
SLP386 (L)1Glu10.2%0.0
SMP243 (L)1ACh10.2%0.0
CL357 (L)1unc10.2%0.0
CL086_a (L)1ACh10.2%0.0
CL090_d (L)1ACh10.2%0.0
LoVP80 (L)1ACh10.2%0.0
SMP256 (L)1ACh10.2%0.0
MeVP29 (L)1ACh10.2%0.0
CL098 (L)1ACh10.2%0.0
PLP160 (L)2GABA10.2%0.0
SMP184 (L)1ACh10.2%0.0
CL012 (L)1ACh10.2%0.0
CB1956 (L)2ACh10.2%0.0
CL071_b (L)2ACh10.2%0.0
CL182 (L)2Glu10.2%0.0
LoVP6 (L)1ACh0.50.1%0.0
SMP081 (L)1Glu0.50.1%0.0
CB3143 (L)1Glu0.50.1%0.0
SMP595 (L)1Glu0.50.1%0.0
PLP252 (L)1Glu0.50.1%0.0
CL040 (L)1Glu0.50.1%0.0
SMP451 (L)1Glu0.50.1%0.0
CB4023 (L)1ACh0.50.1%0.0
CL172 (L)1ACh0.50.1%0.0
SMP319 (L)1ACh0.50.1%0.0
CB3479 (L)1ACh0.50.1%0.0
CL353 (L)1Glu0.50.1%0.0
CL225 (L)1ACh0.50.1%0.0
CL167 (L)1ACh0.50.1%0.0
IB070 (L)1ACh0.50.1%0.0
CL012 (R)1ACh0.50.1%0.0
IB050 (L)1Glu0.50.1%0.0
SMP178 (R)1ACh0.50.1%0.0
SMP010 (L)1Glu0.50.1%0.0
ATL001 (L)1Glu0.50.1%0.0
SMP495_a (L)1Glu0.50.1%0.0
PLP216 (L)1GABA0.50.1%0.0
LoVCLo2 (L)1unc0.50.1%0.0
DGI (L)1Glu0.50.1%0.0
AVLP474 (L)1GABA0.50.1%0.0
SMP089 (R)1Glu0.50.1%0.0
FB2F_a (L)1Glu0.50.1%0.0
CB3556 (L)1ACh0.50.1%0.0
CB3293 (L)1ACh0.50.1%0.0
PLP004 (L)1Glu0.50.1%0.0
SMP144 (L)1Glu0.50.1%0.0
SMP175 (L)1ACh0.50.1%0.0
SLP321 (L)1ACh0.50.1%0.0
CL175 (L)1Glu0.50.1%0.0
CB1547 (L)1ACh0.50.1%0.0
SLP134 (L)1Glu0.50.1%0.0
LoVP24 (L)1ACh0.50.1%0.0
CB1368 (L)1Glu0.50.1%0.0
CB3360 (L)1Glu0.50.1%0.0
CRE099 (R)1ACh0.50.1%0.0
CB2931 (L)1Glu0.50.1%0.0
CRE055 (L)1GABA0.50.1%0.0
CRE093 (R)1ACh0.50.1%0.0
SLP359 (L)1ACh0.50.1%0.0
CB1551 (L)1ACh0.50.1%0.0
IB016 (L)1Glu0.50.1%0.0
LoVP17 (L)1ACh0.50.1%0.0
PS206 (L)1ACh0.50.1%0.0
SMP245 (L)1ACh0.50.1%0.0
SMP566 (L)1ACh0.50.1%0.0
CL152 (L)1Glu0.50.1%0.0
IB054 (L)1ACh0.50.1%0.0
LoVP17 (R)1ACh0.50.1%0.0
FB2J_b (L)1Glu0.50.1%0.0
PS031 (L)1ACh0.50.1%0.0
CB0734 (L)1ACh0.50.1%0.0
SMP588 (R)1unc0.50.1%0.0
SLP074 (L)1ACh0.50.1%0.0
SMP153_a (L)1ACh0.50.1%0.0
WED182 (L)1ACh0.50.1%0.0
5-HTPMPV01 (L)15-HT0.50.1%0.0
SMP181 (L)1unc0.50.1%0.0
IB021 (L)1ACh0.50.1%0.0
LAL012 (L)1ACh0.50.1%0.0
LAL015 (L)1ACh0.50.1%0.0
LoVC18 (L)1DA0.50.1%0.0
CL063 (L)1GABA0.50.1%0.0
AL-MBDL1 (L)1ACh0.50.1%0.0
LHPV5e3 (L)1ACh0.50.1%0.0
mALD1 (R)1GABA0.50.1%0.0