Male CNS – Cell Type Explorer

CB2956(L)

2
Total Neurons
Right: 1 | Left: 1
log ratio : 0.00
406
Total Synapses
Post: 245 | Pre: 161
log ratio : -0.61
406
Mean Synapses
Post: 245 | Pre: 161
log ratio : -0.61
ACh(91.6% CL)
Neurotransmitter

Neuron Visualization

Dark Light

Navigation

🖱️ Left Mouse Button (LMB) + Drag
Rotate the view.
Shift + 🖱️ LMB + Drag
Translate the view.
Ctrl + Mousewheel
Zoom in and out.
⌨️ z
Reset view to closest
⌨️ o
Toggle between orthographic and perspective projection.
⌨️ l
Reassign random colors to neurons and ROI meshes.

Filtering

screenshot of neuroglancer filter section
1
Use text to filter neurons by type name.

2
Use tags to require or exclude neurons of certain properties, e.g. `soma_side`.

3
Add / remove matched neurons from view.

4
Remove currently selected neurons from view.

5
Toggle individual neurons from view.
?

ROI Innervation (10 ROIs)

ROI Name
In
%
In
log
ratio

Out
%
Out
SPS(R)197.8%1.515433.5%
WED(L)6325.7%-3.1774.3%
SPS(L)4618.8%-2.7274.3%
WED(R)124.9%1.703924.2%
IPS(L)3915.9%-3.7031.9%
CentralBrain-unspecified166.5%0.462213.7%
IPS(R)166.5%0.00169.9%
PLP(L)2811.4%-3.8121.2%
PLP(R)31.2%1.74106.2%
AMMC(L)31.2%-1.5810.6%

Connectivity

Inputs

upstream
partner
#NTconns
CB2956
%
In
CV
PLP020 (L)1GABA156.6%0.0
CB0652 (L)1ACh146.1%0.0
PLP081 (L)1Glu114.8%0.0
PS156 (L)1GABA104.4%0.0
PLP081 (R)2Glu104.4%0.8
PS282 (R)3Glu104.4%0.4
CB2361 (R)2ACh93.9%0.6
PS242 (R)2ACh93.9%0.1
VSm (R)2ACh93.9%0.1
PS157 (L)1GABA83.5%0.0
MeVP9 (L)3ACh73.1%0.5
MeVP59 (L)1ACh62.6%0.0
MeVPMe8 (L)1Glu52.2%0.0
PS350 (R)1ACh41.7%0.0
LAL168 (R)1ACh31.3%0.0
CB4090 (L)1ACh31.3%0.0
DNge089 (R)1ACh31.3%0.0
WED085 (L)1GABA31.3%0.0
GNG659 (R)1ACh31.3%0.0
PS262 (R)1ACh31.3%0.0
PS280 (R)1Glu31.3%0.0
ANXXX094 (R)1ACh31.3%0.0
GNG310 (R)2ACh31.3%0.3
CB1856 (R)1ACh20.9%0.0
CB3865 (L)1Glu20.9%0.0
PS283 (R)1Glu20.9%0.0
WED077 (L)1GABA20.9%0.0
CB2956 (R)1ACh20.9%0.0
PS210 (R)1ACh20.9%0.0
CB0652 (R)1ACh20.9%0.0
CB4228 (L)1ACh20.9%0.0
PLP025 (L)1GABA20.9%0.0
CB3220 (L)1ACh20.9%0.0
MeVPMe5 (R)1Glu20.9%0.0
PS313 (R)1ACh20.9%0.0
AN04B003 (L)1ACh20.9%0.0
PS156 (R)1GABA20.9%0.0
AN06B009 (L)1GABA20.9%0.0
PLP262 (L)1ACh10.4%0.0
PS061 (R)1ACh10.4%0.0
LLPC3 (L)1ACh10.4%0.0
WED164 (L)1ACh10.4%0.0
WED128 (R)1ACh10.4%0.0
CB0640 (L)1ACh10.4%0.0
PS051 (L)1GABA10.4%0.0
WED076 (L)1GABA10.4%0.0
GNG309 (R)1ACh10.4%0.0
PS087 (R)1Glu10.4%0.0
CB4143 (L)1GABA10.4%0.0
CB2252 (L)1Glu10.4%0.0
CB2361 (L)1ACh10.4%0.0
CB2694 (R)1Glu10.4%0.0
PS148 (L)1Glu10.4%0.0
SAD080 (L)1Glu10.4%0.0
PS246 (L)1ACh10.4%0.0
PLP102 (L)1ACh10.4%0.0
CB1856 (L)1ACh10.4%0.0
CB2246 (L)1ACh10.4%0.0
CB1030 (L)1ACh10.4%0.0
CB1322 (R)1ACh10.4%0.0
WED010 (L)1ACh10.4%0.0
WED024 (R)1GABA10.4%0.0
AN04B023 (L)1ACh10.4%0.0
AMMC022 (L)1GABA10.4%0.0
DNg02_a (L)1ACh10.4%0.0
WED079 (L)1GABA10.4%0.0
CB0382 (L)1ACh10.4%0.0
AN04B023 (R)1ACh10.4%0.0
AMMC023 (L)1GABA10.4%0.0
PS242 (L)1ACh10.4%0.0
LAL166 (R)1ACh10.4%0.0
CB4090 (R)1ACh10.4%0.0
PS053 (R)1ACh10.4%0.0
PLP259 (R)1unc10.4%0.0
MeVPMe8 (R)1Glu10.4%0.0
PLP260 (L)1unc10.4%0.0
PS061 (L)1ACh10.4%0.0
GNG638 (L)1GABA10.4%0.0
MeVC9 (R)1ACh10.4%0.0
LPT59 (R)1Glu10.4%0.0
LoVC22 (R)1DA10.4%0.0
DNge138 (M)1unc10.4%0.0
5-HTPMPV03 (L)15-HT10.4%0.0

Outputs

downstream
partner
#NTconns
CB2956
%
Out
CV
PS156 (R)1GABA5317.8%0.0
WED128 (R)4ACh227.4%0.9
SpsP (R)2Glu196.4%0.2
PS157 (R)1GABA134.4%0.0
CB0652 (L)1ACh113.7%0.0
DNge140 (R)1ACh82.7%0.0
CB1856 (L)2ACh72.4%0.1
PLP038 (R)2Glu62.0%0.3
CB2361 (L)1ACh51.7%0.0
DNge013 (R)1ACh51.7%0.0
WED024 (R)1GABA51.7%0.0
PLP025 (R)2GABA51.7%0.6
CB1131 (R)1ACh41.3%0.0
WED085 (L)1GABA41.3%0.0
PS246 (L)1ACh31.0%0.0
CB3381 (R)1GABA31.0%0.0
MeVC9 (R)1ACh31.0%0.0
LAL205 (R)1GABA31.0%0.0
CB2361 (R)2ACh31.0%0.3
DNpe015 (R)2ACh31.0%0.3
DNpe032 (R)1ACh20.7%0.0
PS051 (R)1GABA20.7%0.0
PS213 (R)1Glu20.7%0.0
CB0657 (R)1ACh20.7%0.0
CB2956 (R)1ACh20.7%0.0
CB1836 (R)1Glu20.7%0.0
WED129 (R)1ACh20.7%0.0
WED130 (R)1ACh20.7%0.0
WED164 (R)1ACh20.7%0.0
CB1641 (L)1Glu20.7%0.0
CB1464 (R)1ACh20.7%0.0
CB1641 (R)1Glu20.7%0.0
LoVC27 (R)1Glu20.7%0.0
LPT111 (R)1GABA20.7%0.0
DNg36_b (R)1ACh20.7%0.0
CB3220 (L)1ACh20.7%0.0
CB0640 (R)1ACh20.7%0.0
PS280 (R)1Glu20.7%0.0
SAD034 (L)1ACh20.7%0.0
LPT114 (R)1GABA20.7%0.0
PS084 (R)1Glu20.7%0.0
MeVC6 (L)1ACh20.7%0.0
WED210 (R)1ACh20.7%0.0
GNG416 (R)2ACh20.7%0.0
LPT111 (L)2GABA20.7%0.0
PS047_b (R)1ACh10.3%0.0
CB2294 (L)1ACh10.3%0.0
PS317 (R)1Glu10.3%0.0
PS238 (R)1ACh10.3%0.0
CB3581 (L)1ACh10.3%0.0
PS157 (L)1GABA10.3%0.0
MeVC9 (L)1ACh10.3%0.0
WED076 (L)1GABA10.3%0.0
SIP086 (R)1Glu10.3%0.0
CB4143 (R)1GABA10.3%0.0
DNge114 (R)1ACh10.3%0.0
CB1836 (L)1Glu10.3%0.0
CB1997_b (L)1Glu10.3%0.0
CB1556 (R)1Glu10.3%0.0
PS210 (R)1ACh10.3%0.0
LoVC26 (R)1Glu10.3%0.0
CB0652 (R)1ACh10.3%0.0
CB1564 (R)1ACh10.3%0.0
WED033 (R)1GABA10.3%0.0
CB2694 (R)1Glu10.3%0.0
CB2972 (L)1ACh10.3%0.0
LoVC27 (L)1Glu10.3%0.0
PLP102 (L)1ACh10.3%0.0
OCC02a (R)1unc10.3%0.0
CB1504 (R)1Glu10.3%0.0
CB2503 (R)1ACh10.3%0.0
CB1030 (L)1ACh10.3%0.0
PS241 (R)1ACh10.3%0.0
LPT28 (R)1ACh10.3%0.0
PLP103 (R)1ACh10.3%0.0
PS282 (R)1Glu10.3%0.0
WED026 (L)1GABA10.3%0.0
PLP025 (L)1GABA10.3%0.0
DNge117 (R)1GABA10.3%0.0
DNg08 (L)1GABA10.3%0.0
CB0657 (L)1ACh10.3%0.0
PLP071 (R)1ACh10.3%0.0
AOTU065 (R)1ACh10.3%0.0
PS082 (R)1Glu10.3%0.0
AOTU065 (L)1ACh10.3%0.0
PS083_b (R)1Glu10.3%0.0
DNge030 (L)1ACh10.3%0.0
DNpe004 (R)1ACh10.3%0.0
MeVP59 (L)1ACh10.3%0.0
DNp21 (R)1ACh10.3%0.0
PS052 (R)1Glu10.3%0.0
WED121 (R)1GABA10.3%0.0
DNp21 (L)1ACh10.3%0.0
LAL165 (R)1ACh10.3%0.0
IB097 (L)1Glu10.3%0.0
WED076 (R)1GABA10.3%0.0
PLP248 (R)1Glu10.3%0.0
ATL030 (R)1Glu10.3%0.0
MeVC5 (R)1ACh10.3%0.0
AVLP593 (R)1unc10.3%0.0
PS048_a (R)1ACh10.3%0.0
MeVC7b (L)1ACh10.3%0.0
PS058 (L)1ACh10.3%0.0
DNpe032 (L)1ACh10.3%0.0
DNge141 (R)1GABA10.3%0.0
DNge138 (M)1unc10.3%0.0
DNp31 (L)1ACh10.3%0.0